KEGG   Passer montanus (Eurasian tree sparrow): 120504487
Entry
120504487         CDS       T07277                                 
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04120  Ubiquitin mediated proteolysis
pmoa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120504487 (SYVN1)
   04120 Ubiquitin mediated proteolysis
    120504487 (SYVN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmoa04121]
    120504487 (SYVN1)
Enzymes [BR:pmoa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120504487 (SYVN1)
Ubiquitin system [BR:pmoa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120504487 (SYVN1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-RING-like zf-ANAPC11 zf-HC5HC2H zf-Nse zf-C3H2C3 FANCL_C Endonuclease_7 Prok-RING_4 RINGv
Other DBs
NCBI-GeneID: 120504487
NCBI-ProteinID: XP_039569933
LinkDB
Position
Unknown
AA seq 402 aa
MLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQNENPWDNKAVFMLYTELFTGLIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPPQPPPEAPAPAPAAAQGPPNF
PQGLLPPFPPGMFPFWPPVGPFPPGPAAAAPAPPGPEAAGAA
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgctgtgcacggcgctggtcatggccggcagcctggcgctcaccacggccgtggtggcc
cacgcctactacctgaagcaccagttctaccccaccgtggtgtacctgaccaagtccagc
cccagcatggccgtgctgtacatccaggctttcgtgctggtgttcctgctgggcaagttc
atgggcaaggttttcttcgggcagctgcgcgcggccgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagc
ccgcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgtgtggattttatggagaggagccccaacatctcgtggctcttccacttccga
atcgtctccctgatgttcctgctgggaatcctggacttcctcttcgtcagccacgcctac
cacagcatcctgacccgcggcgcctccgtccagctggtcttcggcttcgagtacgccatc
ctgatgaccatggtgctgaccatcttcatcaagtacgtgctgcactccgtcgacctgcag
aacgagaacccctgggacaacaaggccgtgttcatgctctacaccgagctcttcaccggg
ctgatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccgctcttcgccatccgccccatgtacctggccatgaggcagttcaagaaggccgtcacg
gatgccatcatgtcccgccgggccatccgcaacatgaacacgctgtaccccgacgccacg
gccgaggagctgcaggccatggacaacgtgtgcatcatctgccgggaggagatggtgacg
ggcgccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcgtggttc
cagcggcagcagacgtgccccacgtgccgcatggacgtgctccgcgcctcgctgcccccg
cagccgccccccgaggcaccggcgccggcgccggccgcggcgcagggaccccccaacttc
ccgcaggggctgctccctcccttcccgccggggatgttcccgttctggccgcccgtgggg
cccttcccgcccggccccgccgctgctgccccggccccgcccggccccgaggccgccgga
gccgct

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