Passer montanus (Eurasian tree sparrow): 120504563
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Entry
120504563 CDS
T07277
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03013
Nucleocytoplasmic transport
pmoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120504563 (UPF3A)
03015 mRNA surveillance pathway
120504563 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120504563 (UPF3A)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120504563 (UPF3A)
mRNA cycle factors
P-body specific factors
120504563 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
120504563
NCBI-ProteinID:
XP_039570097
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MDAPQLTESPRRDTDAPPSPSPLPPPLQPAPGKQREEKKTALSKVVIRRLPPCLTKEQLE
EQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFIDNKGLEYP
AVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLENYCADEDKICANPEILLGEIEAK
TRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRKRREEERRKR
KEVEKQKKISEKEIRIKLLKKPEKGDELASEKHKEKGEEADIEENKWDKSPGSGSIKSKS
LESSLKEIKEKPQNDSDKEQRDLERRFREKEPERQRYRLDDGRKHRTHYEFDKFMRRNEE
ELKWGKGYNQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASKKERIRNKDRPAMQLYQPG
ARIRTHMGPTSKTYDCSGKSFEDALDKKYEADNSAGAGSEKTEEAE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggacgccccgcagctgacggagtcgccgcgccgcgacacggacgctccgccgagcccg
tccccgctgccgccgccgcttcagccggcgccggggaagcagcgggaggagaagaaaacg
gcgctgagcaaagtggttattcgaaggcttcctccttgtctaaccaaggagcaactggag
gaacagctgcatcctctacctgcccatgattattttgagttttgcactgctgatcccagc
ctttatcctcatctctactcaagagcatacattaactttagaaatcctgaggacatcctt
ctttttagagatcgttttgatggctatatcttcattgataataaaggtttggaatatcct
gcagtggttgaatttgctccattccagaagatttcaaaaaagaaactgaagaagaaagat
gccaaagctgggagcattgaagatgatccagaatataggaaatttttagagaattattgt
gctgatgaagacaagatctgtgccaatcctgagattcttttgggagagattgaggccaaa
acaagggaactcattgctagaagaacaacaccccttttggaatatattaaaaatagaaaa
ttagaaaagcagagaatacgagaagagaaaagagaagaacgaaggcggagagaattggag
aagaaacgtttgcgggaggaagagaaaaggaagcgcagagaagaagaaagacgtaaaaga
aaagaagtggagaagcaaaagaagatttctgaaaaagaaataaggatcaagcttctcaag
aagcctgaaaaaggagatgaactggccagtgaaaagcacaaagaaaaaggtgaagaagct
gacattgaggaaaataaatgggataaatcacctggatctgggagtataaaatccaaatct
ttggagagttcactaaaagaaattaaggaaaagccacaaaatgatagtgacaaagagcaa
agagatttggagagaagatttcgagaaaaagaacctgaaagacaaaggtatcgattggat
gatggcagaaagcatagaactcactatgagtttgacaagtttatgagaaggaatgaagaa
gagctgaaatgggggaaaggatacaaccaagacagagggaagaaagggaactacaactac
agcttcactgtggaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggca
tccaaaaaggagcgcataagaaataaggatcgtccagccatgcagttgtaccagccagga
gctcgcatccgaacacatatgggacctacaagcaaaacctatgactgcagtgggaaatcc
tttgaagatgctcttgataaaaagtatgaggcagataattcagctggagctggttctgaa
aagactgaagaagcagaataa
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