Passer montanus (Eurasian tree sparrow): 120504766
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Entry
120504766 CDS
T07277
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120504766 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoa04121
]
120504766 (LMO7)
Ubiquitin system [BR:
pmoa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120504766 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120504766
NCBI-ProteinID:
XP_039570508
LinkDB
All DBs
Position
Unknown
AA seq
1872 aa
AA seq
DB search
MDGREDAEYDFQEAFAEARRWLEAVTRQSFGTGDFRAALENGVLLCDLINKIKPGIVKKI
NRLPTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQDLSNRVTVKPEETNRRVKNVLIT
LYWLGRKAQIDPDYNGPYLNLKAFEKLLGQALSKALEESSQLSRSGRDSGYGDIWYVDRG
EPFSSSVTHKRDDSFDSLDSLGSRSCTSFSSDITLKGGSEGCDSDTDSELPSKMHDSHKD
DRSYRRISVIEPKPTTDFNRFLPNKNKQTAYVPAPLRKKRIEKNEDNRRSWASPVFTESD
GAFSSGRETNPVASCQNSRAECGLTNPASLQIISEYDSGSDSEDERRLPDVVLDDLANRR
FLVKKSPVSSAAPGHHFMLRNDSPKSCSQESYPAGPLAAMLEPLSNQKRQRQLDTKEENK
PRANNPSQLSGYFDEDEEEVGIPNIEKDDLYFRKLSSSAPNTVVAFDKFLPKFWTPEEEL
LWKKIKKSSFKPWYKEIQGFSRKRSDSEDEEFAYKQSCTIVANQSRQSFDWNSSCRRDQN
YKPTAEYVGSSLSQIAEGKILESPDQPSQFSLLQALQKYTDYVSSETETRIDPTSGPRLI
KCRKNVSFIPGGKQGDEDNGYLYPDLENDDLFVRKTGAFHVNQVVLQDPRYLKKFSEQEP
PLEGEIILQPREGQTVIPDLEKDDMIFRKVLSQKKEVPLSGAPDKYHPALFPDPWSLPEE
IRSKFLCLLEKNAIPEERKSNGRVLSPSLHHKKDDMLTRKIESWKVGSNVQPVNFIPGPC
SEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEQGSKSLNDVSAEELQTLRKIRYEEL
QKIKEQLQEQDLKWQEDLAKWKSRRKSYTSELQKKKEEREEIERRASEVSGRSTKSLKEM
QQERLYSHREERDQDSYEQQKQEHNWAYSLNDDVFGEEKAPSTAAKDWSAAKDYRLEEDT
SYSTKDSKSVSATRPPKENLPESLAAREAPAPPESLEREQSPALSSTRYSVNAQTGSAQV
SASLPRTYQKTDTSRLTSVVTPRPFGVHSRGISSLPRSFTMDDAQKYNGEVEKAKRTQTL
FTSISFSQPDSAHPVSTGAFRSRGEEEEEEKGVQSTPPLSLALPLKSQDQDAGSSIPKPE
YGSPPDSLSLASSAETASLTEPKDSKSMEQYSEMRISINQRPGHSRSFGFTTNWSSSGAI
VQTVEEGSPAALCQLHVDDEIIAVNGTKVSHMDYSQWEEAISRALETGNLVMDVRRYGKN
DWGKDLPSLPRVRHKILNLTSMGTNIIGTSENKWIDATSGEKLSNASTTSTKRDFSSSLQ
SSDTETKLINGMQGDLGSNEQRASEPISLKNLKRRSQFFEQGGPEPAMPDLPVPSISAPS
RRVWDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREEWLRAKQEAEKESSKYFDEEKTV
LTLNTTSITSQASPVSSWRASPEANAPEEPERDGENELAASSLHEEEGRRRLQEERRIQE
EATRHFEQEQELQELELERQRKEREKQHAEEQRRQAEMEEQRRQAEMEEQRRQAEKQREV
SVEVPQYQRHYERYEVSKTIEERAGHPLIDRHYERYEVSKTIEEQPGQSFVDRNKSKSTT
ELNEFNTIRNGTQSKYSERSWNMGESQKKSQKEQNLSAAELERQQILQEMRKKTSLHTDS
SWIRQRSASIHKEPVSLYSSSMRRGESLDNLDSSGIRSWRHHSWLNQSASSSSLSSSQDF
SRPVSTSNRAYMCTPSSSKAPPVATSARAPSTSQTAPRAQSPLSASQSGSQTRSRSVSGK
KICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACGCDLGGSRSGAEVRIRNNKLFCNDC
YIRFKTGQPTSM
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggacgggagagaggacgcggagtacgacttccaggaggcgttcgccgaagcccggcgg
tggctggaggcagttaccaggcaaagctttggaactggagactttagagcagctctagaa
aatggagtcctgttgtgcgatttgattaacaagatcaaacctggcatcgttaagaagatc
aatcgtctgccaactccaatagctggcttggataatataaatgtttttctgaaagcgtgc
gaaaacattggactgaaagaagctcagctttttcacccaggagatcttcaggatttgtcc
aatcgagttacagtcaaaccagaggaaaccaacagaagagtgaaaaatgttttgattaca
ttatactggcttgggagaaaagctcaaattgaccctgattataatggtccatacctcaat
cttaaagcatttgagaagttattaggacaagcactgagtaaggcacttgaagagtccagc
cagctgagcagaagcggcagagacagtgggtacggcgatatttggtacgttgaccgggga
gagcctttctcatcttcagttactcataaaagagacgattcctttgatagcttggactct
cttggttcaagatcctgcacaagcttttcatcggatataaccttgaaaggtggcagtgaa
ggttgcgacagtgacacagactcagaactgccttccaaaatgcatgactcccataaagat
gacaggtcttaccgcagaatttctgtgattgaaccgaaacctaccactgacttcaatcgt
ttcttaccaaacaaaaacaagcagacagcatatgtgccagcacctttaaggaagaagagg
atagagaagaatgaggacaacaggaggagctgggcaagtcctgttttcactgagtcagat
ggagcattttcaagtggacgtgaaacgaatcctgtagcttcctgtcaaaatagcagagca
gagtgtgggctcacaaatccagcttccctccagatcatctctgagtatgacagtggctct
gattcagaagatgaaagaaggctgcccgacgttgttttggatgacttagcaaatcgtaga
tttctagtcaaaaagagccctgtaagctctgctgcacctggacatcatttcatgttgcgc
aatgactctcctaaatcttgctcgcaagaaagttatccagctggtccactagctgcaatg
cttgaaccactgagtaaccagaagaggcagaggcagttggatactaaagaggaaaacaaa
ccaagagctaacaatccttcacaattatctgggtattttgatgaggacgaggaagaagta
ggcatcccaaacattgaaaaagatgatctctattttcgcaagctaagttcttcagcgcca
aatacagttgttgcttttgacaaatttcttcctaagttttggactccagaggaggaattg
ctatggaaaaaaatcaagaaatcctctttcaaaccctggtataaagagattcaagggttc
agtagaaagagatcagattctgaggatgaggaatttgcttacaaacaaagctgtaccatt
gttgctaatcaatcaagacaaagttttgactggaacagtagctgcagaagggatcagaat
tataagccaactgctgaatatgtgggaagctcattgtcacagattgcagaaggaaaaatc
ttggagtctcctgatcagcccagtcagttttcgttacttcaggccctgcaaaaatacact
gactacgtgtcttctgaaacggagaccagaattgatcccacttctggccctaggctcata
aaatgtagaaagaatgtttcctttataccaggaggcaagcaaggagatgaggacaatgga
tatctatatccagatttggagaatgatgatttgtttgttcggaaaactggggctttccat
gtgaatcaagttgttcttcaagacccccgttacttaaagaaattttctgagcaggagcct
cctctagagggtgagataattctgcaacctagagagggccaaactgtgattccagatttg
gaaaaggatgacatgatttttcgtaaagtcctctctcaaaaaaaagaggtgcctttatca
ggtgctcctgacaagtatcacccagcactgtttcctgatccatggagtcttccagaagag
atccggtccaaatttctatgtttacttgaaaaaaatgcgataccagaggaaaggaagagc
aatggcagagtgctgtcaccatctttacaccataagaaggatgatatgctgacccgcaag
attgaatcttggaaagtgggaagcaatgtccagccggtaaattttatcccaggtccatgc
agtgaagaagactggaagaagtgggaagcaatcagggaggccagcaaagttagacacaag
aaacggcagatggtggagagactttttcaaaagctttctgatgagcaagggagtaaatct
ttgaatgatgtcagtgcagaggagctgcagacactgcgcaaaatccgttatgaagagctg
cagaagataaaagaacagttacaagagcaagatctaaagtggcaagaagatctagcaaaa
tggaagagtcgtagaaagagttacacttcagaattgcaaaagaaaaaggaagagagagaa
gaaattgaaaggagggcctctgaggtgtctggaaggagtaccaagtcactgaaggaaatg
cagcaggagaggctctattcccatagggaagagagagatcaggactcctatgagcagcag
aaacaggaacacaactgggcgtattcactgaacgatgatgtatttggtgaagaaaaagca
ccttccacagcagcaaaagattggtcagcagccaaagattaccgtttggaagaagacact
tcctacagcactaaggacagtaaaagtgtgtctgccacccggccgcccaaggagaacctg
ccggagagcttggctgctcgagaagctcctgctcctccagagagcctggagcgggagcag
agcccggcactttcgtccactcgttactcagtgaatgctcaaactgggtcagctcaggtt
tcagcttctctcccgagaacttaccagaaaactgatacctccaggttaacatctgtggtt
acaccaagaccttttggtgtccattcaagaggaatctcgtcacttccacggtcgttcacg
atggatgatgctcagaaatacaatggagaagtagaaaaagctaaaagaactcaaactttg
ttcaccagcatttccttttcacaaccagactctgcacaccctgtctccaccggtgcattc
agaagcagaggtgaggaggaagaggaggaaaaaggtgttcagtcaacacctcctcttagt
ttggcattacctttaaagtcccaagaccaagatgctggaagtagtattcctaagccagag
tatggcagtcctcctgattctctttcacttgcatcttctgcagaaactgccagtctgaca
gagcctaaggattcaaaatccatggagcagtacagtgaaatgagaatcagtataaaccag
agacctggccacagtcgcagctttgggtttacaacaaattggagttcttcaggagccatt
gtacagacagttgaagaaggcagccctgcagcactttgtcagctgcacgtagatgatgag
atcattgctgtcaacggcacaaaggtttcacacatggactacagtcagtgggaagaagcc
atcagcagagcactagaaactggaaacctggtcatggatgtcagacgatatggaaagaat
gattggggcaaagacctgccttccctgccacgtgtaaggcataaaatcctcaatctcacc
agtatgggtaccaacattataggtacatctgaaaataaatggattgatgcaacttcggga
gaaaaactttcaaatgcttccaccacatccacaaaaagagatttctccagcagccttcaa
agctctgatacagaaacaaaattgataaatggaatgcaaggagaccttggctctaatgaa
caaagagcatctgaacctatttctttgaaaaacttaaaaaggcggtcacaattttttgaa
caaggaggcccagagcctgcaatgcctgatcttccagtcccgtccatcagcgctcctagc
cgtcgggtttgggatcaagaggaagagcgaaaacgacaggaaaaatggcaaaaagagcag
gaccgtttgttgcaggagaaataccaacgagaacaagagaaactgagggaagaatggcta
cgagctaagcaagaagcagaaaaagagagctccaagtattttgatgaggagaagaccgtt
ctaaccctaaatacaacatccatcacttctcaggcttcacctgtgtccagctggagagca
agccctgaagcaaatgctcccgaggagccagaacgagatggagaaaacgagctggcagca
agctcgctgcatgaggaagaaggaaggaggaggcttcaggaggaacggaggatccaggaa
gaagcaaccaggcattttgagcaagagcaggagctccaagagctggagctagagagacaa
cgtaaagagagggagaagcagcacgctgaggagcagaggcggcaggcagagatggaggag
cagaggcggcaggcagagatggaggagcagaggcggcaggcagaaaagcagagggaggtg
tcagtggaggtgcctcagtaccaaagacattacgagcgctatgaagtatctaaaacaata
gaggaacgagctggccatcctctcattgataggcattatgagcgttacgaagtttctaaa
accattgaggagcagcctggccagtcatttgttgacaggaataagtcaaagtcaacaaca
gaactgaatgaattcaacacaatcagaaatggtacccagagcaagtattcggagaggtcc
tggaacatgggtgagtcacagaagaaatctcagaaggagcaaaacctgtctgcagcagag
ttggagagacagcaaatccttcaggaaatgagaaagaaaacatctctacacacggacagc
agctggattaggcagcgcagtgccagtatacataaggaacccgttagtctgtacagcagt
agtatgaggagaggggagtctttggacaatcttgattcttcaggaattaggtcatggagg
caccactcatggctgaaccagtctgcatcctcttcatctctatcttctagtcaagatttt
agtcgcccggtgtccacttcaaaccgagcctacatgtgcactccttcctccagcaaagca
cctcctgtggccacctctgcaagagccccctccacatcacagacagctcccagggctcag
tctcccctctctgcttcccagtcagggtcccagacacgcagcaggtcagtcagtgggaag
aaaatctgttcatactgtaataacattctgggcaaaggagcagccatgatcattgagtct
cttggtctttgttatcatttacattgctttaagtgtgttgcctgtggatgcgaccttggt
ggatcccgctctggagctgaagtcaggatccgaaacaacaaactcttctgcaacgactgc
tatatcagatttaaaactggacaaccaacctccatgtga
DBGET
integrated database retrieval system
