Passer montanus (Eurasian tree sparrow): 120505180
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Entry
120505180 CDS
T07277
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120505180 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120505180 (LSM1)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120505180 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
120505180 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
JetA
DUF658
Motif
Other DBs
NCBI-GeneID:
120505180
NCBI-ProteinID:
XP_039571392
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKER
GLSVPRADTLDELSFPWCW
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcacggccagcctgatccaggacatcgacaagaagcacctggtg
ctgctgcgggacggccggacgctcatcgggtacctgcgcagcatcgaccagttcgcgaac
ttggtgttgcaccagactgtggagcgcatccacgtgggcaagaagtatggggacatccct
cggggcatcttcgtggtgaggggcgagaatgtggtgctgctgggggaaattgacctggag
aaggagagcgacacgcctctgcagcaggtgtccatcgaggagatcctggaggagcagcgg
gtggagcagcaggccaagcaggagtcggagaagctgaaggtgcaggcgctgaaggagcgg
ggcctctcggtgccgcgggccgacacgctggatgaattgtcttttccgtggtgctggtaa
DBGET
integrated database retrieval system
