Passer montanus (Eurasian tree sparrow): 120505311
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Entry
120505311 CDS
T07277
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120505311 (TAF1B)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
120505311 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
120505311
NCBI-ProteinID:
XP_039571629
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MDEEDTRDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVVNTDFITNSRVQTISK
GLKKQEKTDGGCEWYICEGFQLVLKKQVEALEALGVCPQMKDEILCNFWRCYLQKSKQAY
CKRPAGETAKALSVCESSTDVDSDPERPSLLHLLSLSESEGDLQTDCSFASSVSKVSEST
SVYSGSVDGSLYLMKNQKEKLRMTMPMTLSFCYMALLWMREPITLSELLRFVVEGHIPYM
NVFQDFPEKMKLCGLDLKIFCVESWPVYEEVFNKMHELAAFLDLPRFPDITESCFLHPDM
LCMKYLMEANLPDELHDWTCRVVKKIGIGEVDFLTLTPGNKSTRKVKYDVLAAAVIVVVL
KLLFLLDDHYEWLLSEFAEERNKNNTEGGPYFEFKKWYEVVKHSLDVKQKKLDEEKAKYL
WRCEKPLFYSVKNKSKALKRRQMVVNLQNQFGKLAGSVQRAEKPNPSSFQLSWSEENTDG
SCFHGHSLKGILQEKRGLLTALNPDYWLCTVKLCNEKLCGHLAHYKEVEFPQSYHFVLGL
FSFLLRIQPSYIHDEVCMIEHKLFNKKLYKKLKYNTVLRKSERLKTSSIKPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacacgagagattttaatgagcgctgtgctcagtgttcagaagtgaac
tggggtctcactgatggaggcagattttattgtagatcttgccacaacgttactgagaga
actagagaagttgtaaacactgattttattactaattcaagagtccaaacaatctccaaa
ggtttaaaaaagcaggagaaaactgatggaggctgtgaatggtatatttgtgaaggcttt
cagcttgtgctcaagaaacaagtggaagctctagaagcattaggagtatgtccacaaatg
aaggatgaaattctgtgcaatttttggaggtgttaccttcagaagagcaaacaggcatat
tgcaagagaccagctggggaaactgccaaagcattatcagtgtgtgagagcagtactgat
gtggacagtgatccagagagacccagccttctgcacttgctgtctctctctgaaagtgag
ggggatctgcagactgactgcagctttgcctcatccgtgagcaaggtctcagaaagcacc
tctgtgtactctggatcagtagatggcagcttgtatttaatgaagaaccaaaaggagaaa
ctgaggatgacgatgccaatgacactttcattttgttacatggcattactctggatgaga
gaaccaattacactgtccgagctcttaaggtttgttgttgaagggcacattccatatatg
aatgttttccaggattttccggagaaaatgaagttatgtggacttgatcttaagatcttt
tgtgtagagtcgtggcctgtgtatgaagaagtattcaacaaaatgcatgagcttgcagca
tttttagacctgcctcgttttccagatataacagaaagctgctttcttcatccagacatg
ctgtgcatgaagtacttgatggaagctaatttacctgatgaattgcatgattggacttgt
cgagtggtgaaaaagattggtattggagaagtggatttcctgactctaacgcctggaaat
aagtcaacaagaaaagtgaaatatgatgttcttgctgcagcagttattgtagttgtgctt
aaattattgtttttattagatgatcactatgaatggttactttcagagtttgctgaagaa
agaaataaaaataacacagaagggggcccatattttgagttcaagaagtggtatgaggtg
gtaaaacattcattggatgtgaagcaaaagaaactggatgaagaaaaagccaagtatctg
tggagatgtgaaaagccattgttttattcagtcaagaataaatctaaagctctaaagaga
agacaaatggttgtgaacttacaaaatcagtttggcaagctagctggttcagtgcaacgt
gctgaaaagccaaatccttcaagttttcagttaagttggtctgaagaaaacacagatggg
agttgttttcacgggcatagcctgaagggaattttgcaagaaaaacgtggtttactgaca
gccctgaaccctgactattggctgtgtacagttaaactatgtaatgagaaattgtgtggt
catctggctcattacaaagaagtggagtttccccagagttaccattttgtactagggttg
ttctcttttcttctgaggattcaaccctcttatatccatgatgaggtgtgtatgatagaa
cacaaactttttaataaaaaactctataaaaaactaaaatacaacacggtgctaaggaag
tcagaaagacttaaaacctccagtattaagcccatgtaa
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