KEGG   Passer montanus (Eurasian tree sparrow): 120505650
Entry
120505650         CDS       T07277                                 
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X1
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03015  mRNA surveillance pathway
pmoa05164  Influenza A
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120505650 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    120505650 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmoa03021]
    120505650 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:pmoa03019]
    120505650 (CPSF4L)
Transcription machinery [BR:pmoa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     120505650 (CPSF4L)
Messenger RNA biogenesis [BR:pmoa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     120505650 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH Torus zf_CCCH_4 zf-CCCH_4 zf-CCCH_2 zf-CCCH_3
Other DBs
NCBI-GeneID: 120505650
NCBI-ProteinID: XP_039572314
LinkDB
Position
Unknown
AA seq 255 aa
MMQELVAGVEKITFDSEAAVEELRARPLPFPGVDSGAVGQAGSDRAVPGVQGHPKPAVCK
HWLRGLCKRGEGCDFLHDYDATRMPECYFYSKFGECSSKDCPFLHVGATSSAVGCPWYDR
GFCWHGPQCKYKHTRRVMCANYLVGFCPEGPKCKFVHLKAGLMTSSTDPSKEAGCPWGLV
QRDLAAAEERGGQHVPAKEPPPRGTQHLAAQLWDTRGCPLSPQSLLEGGTCSKRGSASPR
ASHSRRTQLEMLLGK
NT seq 768 nt   +upstreamnt  +downstreamnt
atgatgcaggagctggtggctggcgtggagaagatcacgtttgactcggaggctgctgtg
gaggagctcagagctcggcccctgcccttcccgggggtggacagtggggcagtgggacag
gctggcagtgacagggctgtcccaggtgtgcagggccaccccaagcccgccgtgtgcaag
cactggctgcgagggctctgcaagaggggcgaaggctgcgacttcctgcacgactacgat
gccaccaggatgcccgagtgctatttctactccaagttcggtgagtgcagcagcaaggac
tgtcccttcctgcacgtgggtgccacctccagcgccgtgggctgtccctggtacgaccgt
ggcttctgctggcacggtccccagtgcaagtacaagcacacgaggagggtgatgtgtgcc
aactacctggtgggcttctgccccgagggacccaagtgcaagtttgtgcacctcaaggcc
gggctgatgacgagcagcacagacccatccaaggaagctggatgcccttgggggctggta
cagagggatctggctgctgcagaggagaggggagggcagcacgtgccagccaaggagcca
cctccacggggcacccagcacctggcagctcagctgtgggacaccagaggctgtcccctg
agccctcagagcctgctggaaggaggcacctgctccaagagaggatcagccagcccccgt
gccagccacagcaggaggactcagctggaaatgctgctgggaaagtga

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