Passer montanus (Eurasian tree sparrow): 120506230
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Entry
120506230 CDS
T07277
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04382
Cornified envelope formation
pmoa04510
Focal adhesion
pmoa04512
ECM-receptor interaction
pmoa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120506230 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120506230 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120506230 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120506230 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoa04147
]
120506230 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
pmoa00536
]
120506230 (COL4A5)
Exosome [BR:
pmoa04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120506230 (COL4A5)
Glycosaminoglycan binding proteins [BR:
pmoa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120506230 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120506230
NCBI-ProteinID:
XP_039573506
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MEPRRRSCSLAAGCLLLLLLGCWGPREAAAAACHGCTSLSKCDCSGVKGEKGERGFPGLE
GQPGLPGFPGPEGPPGPRGSKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPP
GPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFP
GLPGIPGPPGSVGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG
PPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPPGPPGLPGGVKGEKGEQGEPGK
RGKPGKDGEPGQPGRDGLPGGPGINGAPGRDGEKGEKGDMGPPGPPGIVVPRPGIDATVG
PKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGV
SIPGQPGVEGPRGPPGPPGPPGPPAPSVAPGEGLCEQGPPGPPGIPGQQGFTGERGQKGD
RGDTCFNCIGTGVTGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGTPG
APGRPGPKGDPGDVLTSPRLKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSV
AFKGEMGIPGDPGIPGLPGEKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGDPG
QTITEPGVPGPPGPPGRIGDPGLPGDPGQPGQRGLPGIPGAKGEPGIPGIGLPGPPGPKG
FPGTPGPPGAPGTPGRPGLDGPPGPPGFPGEKGDRGFGVPGPPGPPGPPGIKGVQGPKGD
PGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGIPGPPGIPGIGGQGPPGSPGPPGPVGPP
GPPGLQGVPGEKGDPGPPGFDIPGPPGDQGAPGYPGPPGLPGPQGAPGPPGRDGIPGFPG
AKGEMGVMGAPGPPGPPGTPGRNGLPGLKGNSGLPGPPGPPGPVGQKGIKGEAGLPGPPG
TLDPKQLGAKGEKGEPGVPGVPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGIKGDMGL
PGQPGPTGPPGLKGAMGEMGLPGPPGLKGSQGLAGRPGQPGPAGFPGLKGEKGDPGLSGI
GIPGPPGPKGDLGLPGYPGSPGSKGTAGSPGLPGFPGSPGAKGEPGLPGFPGTPGIPGPK
GIEGPPGNPGLPGPPGPVGDIGRPGPPGPSGEKGLPGRDGIPGPAGQKGEPGLPGFGRPG
PPGLPGLSGQKGELGLPGPPGPPGLPGPKGEPGFQGFPGLQGPPGPPGIPGPPLEGPKGS
PGPPGVPGRPGPSGPPGPPGPEGPRGPPGSGGLKGEKGNPGPPGPPGLTGPKGDQGPPGR
QGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGR
SIVVKGDPGSPGPPGQPGSKGPPGLPGPQGLPGPIGLPGDPGRDGLPGFDGPAGRKGERG
LPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGF
SLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPESMPM
SMEPLTGQSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGA
EGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLK
AGDLRTRISRCQVCMKKT
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcggcggcggagctgcagcctggccgccggctgcctgctgctgctgctgctg
gggtgctgggggccgcgggaggcggcggcggcggcttgccatggatgtacatctttatcc
aaatgtgattgcagtggagtaaaaggtgaaaagggtgaaagaggattcccaggcttggaa
ggacagccaggtttgcctggatttccaggaccagaaggaccacctggtccaagaggctca
aagggcgacgatggtcttccagggcctattggacccaaaggaatcagaggtccaccaggg
cttcccgggtttccaggaacaccaggacttcctggattgccaggacaagatgggccacca
ggacctcagggtatcccaggatgcaatggaactaagggagaacgtggattcccaggcagt
ccaggctttcctggtttacaagggcctcctggaccccctgggctgccaggtatgaagggt
gaagcaggtgaaataattacatccttgctgccaggacagaagggtgacccaggatttcca
ggtcttccaggaatacctggcccccctggctccgtgggaataccaggcccagttggtcct
ccagggcccccaggtttgacgggacctcctggcccaccagggctgccaggacccaagggt
aatatgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggtcttcaggga
cctccagggccaccaggacaaattggagaacagaaaagaccaaatgacattgagtttcag
aaaggagatcagggtattccaggtgatccaggcccaccaggacttcctgggcctccaggc
cctcctggtcttcccggtggtgtgaaaggtgaaaaaggtgagcaaggagaaccaggcaaa
agaggaaagcctggcaaagatggagaacctggtcagcctggtagggatggtttacctggt
gggcctggaataaatggtgctccaggaagagatggtgaaaagggtgaaaaaggtgacatg
ggtccccctggtcctcctggaattgttgttccaagaccaggcatagatgcaacagtggga
ccaaaaggtagcaaaggattgccaggacttccaggagccaaaggggagcgtggattctcg
ggtaggccaggcccacctggcttgccaggatctccagggatcactactgttggacctcct
ggcccacctggcttacctggtgagaggggacagaagggagatccaggtttacctggggtt
tctattcctgggcagccaggagtggagggaccacgaggaccgccaggaccaccgggtccc
ccagggccacctgcaccatctgttgctcctggtgaagggttatgtgagcaagggccacca
ggtcctccaggaattccaggacaacaaggttttacaggggagcgaggccaaaaaggtgat
cgaggagacacatgcttcaactgcataggaactggagtaactggtcctcctggggagagg
ggaccaccaggacctccgggtagtccaggttctcctggttttcctggaccaaaaggtgaa
aaggggcttcctggattaactggccttgtagggccaccaggcttcccaggcaccccaggt
gctcctggtagacctggtcctaaaggagacccaggggatgtcctgacttctccaagactg
aaaggtgacaaaggagaccctggctttccaggacccccaggtctccctggcatagatggc
actcctggacgagatggactgccaggtttgcctggccctaagggggaacctggcagtgtt
gcattcaaaggagaaatgggtattccaggtgacccagggataccaggtcttcctggagag
aaaggacttcctggacctcctggttttggtccacaaggctcacctggtgaaaagggcatc
caaggggtatctggccgtccagggcctcctggtgtcccaggtccaaaaggtgaccctggc
cagactattacagaaccaggagttcctggtccccctggtcctccaggaagaattggtgat
ccaggtcttccaggagatcctggtcagccaggtcagcgtggtttacctggcatcccaggt
gcaaagggagagccaggtattcctggcattggccttccaggtccaccaggccccaagggt
ttcccagggactccaggccctcccggagctccaggaactccaggtcgccctgggctggat
ggacctcctggaccacctggtttcccaggagagaagggagaccgtggatttggagttcca
ggacctcctgggcccccaggacccccaggcataaaaggtgttcaaggacctaaaggtgat
cctggtttcccaggaaatcctggtctcccaggccgggcaggctttgatggaaccccaggg
cccaaaggtgaccctggaccaagtggaccaccaggaattccaggcccaccaggcatccct
ggcattggtggtcagggtcctcctggatctccaggacctccaggtcctgttggcccccca
ggtcccccagggctgcagggcgttccaggggagaagggagatccaggtcctccgggcttc
gatattcctgggcctccaggtgaccaaggagctccaggatatccaggaccccctggacta
ccagggcctcagggtgcacctgggccccctggcagggatggaatacctggatttccaggt
gccaaaggtgagatgggtgtcatgggagctcctggtcctccagggcctccaggaactcct
ggaagaaatggtctgcctggcttgaaaggtaatagtggattacctggtccaccaggacct
cctggaccagtggggcagaaaggcatcaaaggtgaagcaggtctgccaggtccacctgga
acacttgatcccaaacagctgggagcaaaaggagaaaaaggcgagccgggtgttccaggt
gttcctggtttatcaggccagaaaggttatcaaggtctcccaggtgacccaggcccacca
ggacttagtggcccaccaggtgtgccaggattgccaggcatcaagggagacatggggctt
cctgggcagccaggaccaacaggacctccaggattaaaaggagctatgggagagatgggc
cttccaggtccccctgggcttaaaggcagccaaggactagcaggacgtccagggcagcct
gggcctgcaggatttcctggactcaaaggggagaaaggtgaccctggtctctcaggcatt
ggtattcctggtccccctggaccaaagggagatcttggcttgcctggatacccaggtagt
ccaggctctaaaggtacagctggaagtcctggtttgcctggatttccaggcagtccaggt
gcaaaaggagaaccaggccttcctggattcccaggaacaccaggaattccaggaccaaaa
ggtattgaaggccctccaggtaatcctggcctgcctggaccacctgggccagtaggtgat
attggtcgtcctggcccccctggtccttcaggggaaaagggactaccaggtcgagatggt
atccctggaccagcgggtcagaagggtgaaccaggtctaccaggttttggtcgtccagga
cccccaggactcccaggattgtcagggcaaaaaggagaactggggttacctggcccacca
ggaccccctggacttccaggaccaaagggagaaccaggtttccagggcttccctgggctg
cagggtccaccaggtccaccaggaataccagggccacctctggagggtcctaaaggtagc
cctggcccaccaggtgttccaggaaggccaggtccctcagggcctccaggtccaccaggc
ccagaaggtccacgagggccaccaggcagtggaggacttaaaggggaaaaagggaaccca
ggtccacctggtccacctggcctgactggtccaaagggagatcaaggaccacctggacgc
cagggggatcctgggcgtccaggtctgaatggaatgaaaggtgaccccggggttccaggc
gttccaggattcccaggtatgaagggtcccactggacctgcaggacccgccggcctcacg
ggcagccagggactgccaggcccaccaggtcccccaggtttaccaggtaccattggacga
agcattgttgtcaaaggtgatcctggttccccaggtcctccaggacagcctgggtccaaa
gggccacctggattgccagggccacagggattgccaggtccaattggtcttcctggtgac
ccagggagagatggacttcctggatttgatggtccagcaggacgaaaaggagagagagga
ctcccaggccagccaggttcacgaggaatacaaggacctcctggccctgatggcttacaa
ggcccaccaggtcctcctggaacagcttctgttgctcacggattccttataactcggcac
agccagaccagggatacaccactatgtccacagggaacatcaagaatatatgatggattc
tctcttctatatgtgcaaggaaatgagagagcacatggccaggatttgggtactgctggg
agctgtcttagacgtttcagcaccatgcccttcatgttctgcaacatcaacaatgtttgt
aactttgcatcaaggaatgactactcctactggctgtcaacccccgagtcgatgccgatg
agcatggagccactgacggggcagagcattcagccgttcattagccgatgtgttgtgtgt
gaagctcctgctatggtgatagctgtccacagccagaccattcagatcccctcatgtcct
ccaggctgggactccctctggattggttactctttcatgatgcacacgagtgctggggca
gagggctctggacaggccttggcatcgccgggatcctgtctggaggaattccgctcggca
ccgttcatcgaatgccacggccggggcacctgtaattattatgccaattcatacagtttc
tggctggcaactgtagaggtgtcagaaatgttcagcaaacctcagtctgagacactgaaa
gctggagacttgaggacacggattagtcgttgtcaagtttgcatgaagaagacgtaa
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integrated database retrieval system