Passer montanus (Eurasian tree sparrow): 120506636
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Entry
120506636 CDS
T07277
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120506636 (ZC3H12C)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120506636 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
120506636
NCBI-ProteinID:
XP_039574351
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MGLKDHLGHDLGHLYVGNTGTQINAIVPWSMAEKPTMDKVNSRKEDREKETSEETSGSSS
CDSEESTNSDNDSERLNNSASESHLLPKTHRQLCRSPCLEPHILKRNEILQDFRIEEAQI
VPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTE
TDQTVTNANTSVMREASSIESQRSESPLQEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFS
CRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMP
PDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADE
LRAMSRSTAAKTTSEGGLVKSNSVPCSTKSDGTSELKRAAPKRQSDPSIRTQVYQDLEEK
LPTKNKLETRSVPSLVSIPSSSAGKPQSTAPLTNGLPSGVHFPPQDQRPQGQYPTVMMAT
KNHGTPMPYDQYPKCESPVDVGYYSMLSAYSNLSISGPRSPERRFSLDTDYRISSVASDC
SSEGSVSCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHAHGRLNAQPFLQSYHEPLTR
VQSYSHEEPKHHHKSPIPYMAVHLQHPAVGARSSCPNDYSVPQSSSHSKTLHLGRALVST
RIDSVSDSRLYENSPLRHRKPYSGQEGLGGWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQ
FAFQSLPEQQDQPWRVPYCGIPQDPPRLQDTREKVYVNLCNIFPPDLVRMVMKKNPHVTD
AQQLAAAILVEKSQLGY
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcatctggggcatgacttaggccacctttatgtggggaacactggc
acacaaataaatgcaattgtaccttggtcgatggcggagaagccaacaatggataaggtt
aattctaggaaagaagacagagaaaaggagacatctgaagagacttctggaagctccagc
tgtgactccgaagaaagcacaaattctgataatgattcagagagactgaataattctgca
tcagagtcacatttattgcctaagactcatcgacagctgtgccgatctccttgcttagag
cctcatatactaaaaagaaatgaaatcttgcaagactttaggatagaagaggctcagata
gtacctaaggaagtcaaaaagcctcctgatgtggtgaaagaatatcaaaccaaactggag
tttgcacttaagttgggttactctgaagagcaggttcaacttgtactaaataaacttggt
actgatgctttaataaatgatattttgggagaacttgtcaaactcgggaataaaactgag
actgatcagactgtaactaatgctaacactagtgtaatgcgtgaagcgtcttccatagag
tctcagaggtcagagtctccactgcaggaggatgtgacagaggatggagacaacctgagg
ccaatagttattgatggcagcaatgttgcaatgagccatgggaacaaagaagtattttct
tgtcgaggaatcaaattggcagtagattggtttttggaaagaggccacaaggatgttact
gtgtttgtgccagcgtggaggaaagaacagtcaagaccagatgctcttataacagatcaa
gaaatcttacgcaagttagagaaggagaagattctcgtgttcacaccgtcccggcgcgtg
caagggagaagggtggtgtgctacgatgaccgatttattgtgaagttggccttcgagtca
gatggcatcattgtctctaatgataactacagggacctagctaatgaaaagccagaatgg
aagaagttcatagatgaacgcttgttgatgtattcttttgttaatgacaaatttatgcct
cctgatgatcctcttggccgccatggtccaagtctggacaattttcttaggaagaagcct
attgtgccagaacataagaagcagccatgtccatatgggaagaaatgtacctatggacac
aaatgcaaatactatcatccagaaagaggaaatcagcctcagcgatccgtagctgacgaa
cttcgtgccatgtctagaagcacagctgccaaaactacaagtgaaggaggactggtaaaa
agcaatagcgttccctgtagcactaaaagcgatggcacttcagagctgaagcgtgctgct
ccaaagaggcaatctgatcctagtataaggactcaagtctatcaagacttggaggaaaag
cttcccaccaaaaacaaattggaaaccaggtctgtaccttctttagttagcataccaagt
tcctctgctggaaaaccccaaagtactgcacctttaacgaacggccttccatccggagtt
cacttcccacctcaggatcaaagaccacagggacagtatcctacagtgatgatggcaacc
aaaaatcatggaacaccaatgccttatgaccagtatccaaaatgtgagtctccggtggat
gtagggtattactctatgctgagtgcctattccaatctcagcatatctggaccgcgtagt
cccgagaggcgcttctccttggacacagattatcggattagctctgtagcttccgactgc
agcagcgaggggagcgtcagctgcggcagcagcgactcctacgtgggctacagcgaccgc
tcctacatgagttcgcctgacccgcagctggaggagaacttgaagtgccagcacatgcac
gcccacggccgccttaacgctcagcccttcctgcagagctaccacgagcccctcactcga
gtgcagagctacagtcacgaagaaccaaagcatcaccacaaatctcccattccgtacatg
gctgtgcatctgcagcacccagcagtcggcgctcgttccagttgtccgaacgactactcc
gtgccccagagctcgtctcattccaagacgctgcacctggggagagccctggtgtccacg
agaatagacagcgtttccgactcgcgcttgtacgaaaactccccgttacgacacaggaag
ccttactctggccaggaggggctgggaggctgggataggcagagttacgggatggatgcc
tacggctaccgccagacgtactccttgcccagcaaccccacgcagccgtgctacgagcag
ttcgccttccaaagccttcccgagcagcaggaccagccctggcgcgttccttactgtgga
atcccgcaagacccgccgaggctccaagacacccgggagaaggtttacgttaacctctgc
aacatcttcccccccgatctcgtgaggatggtgatgaagaagaaccctcacgtgacggac
gctcagcagctcgctgctgccatcttagtggagaaatctcagctaggttattga
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