Passer montanus (Eurasian tree sparrow): 120506729
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Entry
120506729 CDS
T07277
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmoa03037
]
120506729 (IFT88)
Cilium and associated proteins [BR:
pmoa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
120506729 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_8
TPR_16
TPR_6
ANAPC3
TPR_11
ARM_TT21_4th
TPR_10
TPR_9
TPR_17
TPR-S
TPR_15
TPR_CcmH_CycH
ARM_TT21_5th
HEAT_Nup120
ARM_TT21_C
DUF2989
HAT_PRP39_C
TPR_21
NatA_aux_su
ARM_TT21_2nd
DUF6584
Motif
Other DBs
NCBI-GeneID:
120506729
NCBI-ProteinID:
XP_039574612
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MKTGRQAKKMMQNVQLAPESNEDDLYSGFNDYNPMFDTEDLENDVAFQQAAKTSHGRRPP
VTAKIPGTSSPRPLATGFGSKTTLTSSMGRPMTGTIQDGVSRPMTAVQAAGYTKAAVRGS
SFDPLGQARGPASPLEKKTSDSLEEKMRQLEKKVNELVEESCVANSCGDLKLALEKAKEA
GRQERELLRQREQIAPPESINLDLTYTVLLNLAGQYVANEMYAEALTTYQVIVKNKMFSN
GGILKVNMGNIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIKTGQYVDA
ISSFEEIMNISPNLKAGFNLILCYFAIGNGEQMKKAFKNLIEVPLEVDYEDKYISLNDDL
HTNLLIEAIKNDSLSQIERERKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHY
VELANDLEINKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQAT
NYADLAVNSDRYNPAALTNKGNTVFANGDCEKAAEFYKEALRNDSLCTEALYNLGLAYKK
LNRIDEALDCFLKLHAILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLA
KLGNLYDTEGDKSQAFHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALIL
PTQVKWQLMVASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYI
TKLKKAEKLKEIREQRIKSGREGSARSRKEGTSDSGGTKGERLSAKLKALPGTSEPYESS
SSKEIDASYADPLGPQPERPKTAARKRMEEDDFADEELGEDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaggtcgccaggcaaaaaaaatgatgcagaatgtgcagctggctcctgagagt
aatgaagatgatctctattctggcttcaatgattataatcccatgtttgacacagaggat
ttagaaaatgatgtggcttttcaacaggcagcaaaaacaagtcatggaagaagaccccct
gtgactgccaaaattcctggtacatcaagtccaagacctctagctactggatttgggtca
aaaacaactttaacttcatccatgggaagacctatgacaggaactatacaggatggagtt
tctcgaccaatgacagcagtgcaagctgcaggttacactaaagcagctgtgagaggttct
tcatttgaccctcttggccaagcaagaggtcctgcttcacctctggaaaagaaaacttca
gacagtttagaagagaagatgaggcagttggaaaaaaaagtgaatgaactggttgaagaa
agctgtgttgccaatagctgtggagacttgaaattggctctggagaaagcaaaggaagct
ggaagacaggaaagagaattgttgaggcagcgtgaacaaattgctcctccagaaagtatc
aacttagacctcacttacacagttctcctcaatctggccggtcagtatgttgctaacgaa
atgtatgctgaagcactgactacttaccaagttatagtgaagaataagatgttcagcaat
ggaggtatactgaaggtaaatatgggaaatatatatttaaaacaacggaactattccaaa
gctatcaaattctaccgtatggctctagaccagatcactagttcccacaaacagatgagg
ataaaaataatggaaaatattggagttgcatttattaaaacaggccaatacgttgatgcc
atttcttcatttgaagaaataatgaacatatccccaaacctgaaggcaggcttcaacctg
atcctgtgttactttgctattggaaatggtgagcaaatgaagaaagccttcaaaaacctc
atcgaagttcccttggaagtggattatgaagacaaatacatttcattaaatgatgatcta
catacgaatctactgattgaagccattaaaaatgacagtttaagtcaaatagaacgtgag
aggaagtccttggcagaggaatacatcatgacagctgctaaactcattgcaccagcaatt
gagacatcttttgcagtaggctatgactggtgtgttgatgcagtgaaagcttcccactat
gtagaattagccaatgatctggaaataaataaagccactacttacttgaggcaacagaat
tttaaccaggcactggagactttgaaaatgtttgaaaaaaaggatagcagagtaaagagt
gcagctgcaacaaacctttcattcctttattatttggggaatgaattggaacaagcaact
aactatgcagatttagcagtaaattctgataggtacaatccagcagctctgactaacaaa
ggaaatactgtttttgcaaatggagactgtgaaaaagcagctgaattttataaggaagct
ctcaggaatgattccttatgtactgaagcactttataatcttggtttagcttacaagaag
ttaaacaggatagatgaagctttggattgttttctgaaactccatgcaatccttccaaat
agtgcccaagtcctttaccagctagcaagcatataccaaatcatggaagatcccaatcaa
gccatagagtggctgctgcagttgatcagtgtagtaccaactgatccacatgtacttgca
aagctagggaatttatatgatactgaaggtgataaatcccaggcttttcattattactgt
gagtcgtaccggtatttcccttccaacattgaggtcattgaatggcttggagcgtattac
attgacacccagttctgtgaaaaagccattgagtactttgaaagggcagcacttatcctg
ccaacacaagtgaagtggcagctgatggttgccagttgctacagaagaagtggcaactac
cagaaagctctggagaaatacaaagtcattcacagaaaattcccagagaatgttgaatgc
ctccggtttttagttcgtctctgcacagacatggggctgaaagaagtccaggaatatata
acaaagctcaagaaagcagaaaaattaaaagaaatcagagagcagcgcattaaatctggc
agagagggcagtgcacggagccgcaaagagggaactagtgatagtggtggtaccaaaggg
gaaagactgagtgccaaactaaaagctctgcctggaacaagtgaaccctatgaaagtagc
agcagtaaagaaatagatgcctcctacgcagatccacttggcccacaaccagaaagacca
aaaacagcagcaagaaaaagaatggaggaagatgattttgctgatgaagaactaggagag
gatctgcttccagaatag
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