Passer montanus (Eurasian tree sparrow): 120507035
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Entry
120507035 CDS
T07277
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120507035 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoa03041
]
120507035 (PRPF6)
Spliceosome [BR:
pmoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120507035 (PRPF6)
Complex C
U5 SnRNP specific factors
120507035 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
TPR_1
T7SS_EccA1_N
ARM_TT21_C
ARM_TT21_5th
TPR_21
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
120507035
NCBI-ProteinID:
XP_039575161
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CENAEPRHGELWCDVSKDIENWQKKIGEILVLVAAKLKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcctgggcatgcccgcgcccctgggctacgtgccgggg
ctgggccgcggggccacgggcttcaccacgcgctcggacatcgggcctgcccgcgacgcc
aacgaccccgtggacgaccggcacgccccgcccggcaagaggaccgtgggcgaccagatg
aagaagaaccagactgcagatgatgacgatgaggacttgaatgacaccaactacgacgag
ttcaatggctatgctgggagcctgttctcaagtgggccctatgaaaaagatgatgaagaa
gcagatgctatttatgcagctttggacaagaggatggatgaacgcaggaaggaaaggagg
gaacaacgagaaaaagaggaaatagagaaataccgtatggaacgacccaaaattcaacag
cagttctcagacttgaaacggaaattagcagaggttactgaggaggagtggctgagcatt
cctgaggtcggggatgccaggaacaagcggcagaggaatcctcgctatgagaagctgact
cctgtccctgacagcttctttgcaaagcatttgcagtcaggggagaatcacacttcagtg
gacccacgccagactcaatttggtggactgaatactccgtatccagggggtttgaatact
ccatacccaggagggatgacaccaggcttgatgacacctgggacaggtgaattggacatg
aggaagattggccaagccaggaacaccttgatggatatgaggctaagccaggtgtcagac
tctgtgagtggccagactgtagtggacccaaaaggatacttgacagacttgaattccatg
attcccacacacggaggagatatcaatgatatcaaaaaagcccgtttgcttctgaaatcc
gtccgagagaccaatcctcatcatccaccagcctggatagcatcagcccgactggaggag
gtcactggcaagctccaggtggctcgaaacctcatcatgaaaggaacagagatgtgccct
aagagtgaagatgtttggttggaagctgctcggcttcagcctggagatacagccaaggct
gtggtggcccaggctgtgcggcacctgccgcagtcggtgcggatctacatcagagcagca
gagctggagacagacatccgtgccaagaaacgtgtccttaggaaagcccttgagcatgtt
ccaaactcggtgcgtttgtggaaagcagccgtggagctggaggaacctgaggatgccagg
atcatgctgagccgggctgtggagtgctgtccaaccagtgttgaactgtggctggctctg
gcaaggctggagacatatgagaacgctcgtaaagtccttaacaaagcccgggagaatatc
ccgaccgatcgtcacatctggatcactgctgccaaactggaggaagccaatggaaacacc
cagatggtggagaaaatcattgacagagccatcacatctctcagggctaacggggtggaa
atcaacagggagcagtggatacaggatgccgaggaatgtgacaaagctggaagtgtggcc
acatgccaggcaatcatgagagctgtgatcgggatcgggatcgaggaagaagatcggaaa
cacacctggatggaagatgcagacagttgtgttgctcataatgccctggagtgtgcccga
gccatttatgcctatgccttgcaagtcttccccagcaagaagagtgtgtggctgcgagca
gcctactttgaaaagaaccatggaaccagagaatccttggaggctcttttgcagagagct
gttgctcactgtcccaaagcagaggtgctgtggctcatgggagccaaatccaagtggctg
gcaggagatgtgccagcagccagaagcatcttggccttggctttccaggccaaccccaac
agtgaggagatctggctggctgccgtgaagctcgagtcggagaacaatgagtatgaaaga
gcgaggaggctgctggcaaaggctcgcagcagtgcccccacagcaagggtcttcatgaag
tctgtgaagttggaatgggtgcttgggaacattgctgcagcccaggagctctgtgaggaa
gccctgaagcactatgaggacttccccaaactgtggatgatgaaaggacaaattgaggaa
caaaaagagctggtagagaaagcacgggaggcttataatcaagggttgaagaagtgcccc
cattccatacccctgtggcttttgctgtccaggctggaggagaaagttgggcagctgact
agagcaagagccatcttggaaaagtctcgcctgaagaatccaaagaatccagatctctgg
ttggagtctgtgcgcttggagtaccgagctgggctgaagaacattgcaaacacactgatg
gccaaggcactgcaagagtgccccaattcaggaatcctgtggtcagaagcaattttcctt
gaagcgcgaccgcaacgaaagaccaagagtgtggatgctctcaagaagtgtgaacatgac
ccacacgtcctgctggctgtggccaagctgttctggagcgagcggaaaataaccaaggcc
agggagtggttccaccgcacggtgaagatcgactctgacctgggggatgcctgggccttc
ttttacaaatttgagctccagcacggcacagaggaacaacaagaagaggtgaggaagcgc
tgtgagaatgctgaacctcgccacggagagctctggtgtgatgtctccaaggacatagag
aactggcagaagaagattggagagattcttgtgcttgtggcagccaagctgaagaatacc
ttctag
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