Passer montanus (Eurasian tree sparrow): 120507097
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Entry
120507097 CDS
T07277
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120507097 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120507097 (TAF4)
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120507097 (TAF4)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120507097 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
120507097 (TAF4)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120507097 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
120507097
NCBI-ProteinID:
XP_039575303
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPSPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPAASVGTGAPTVTLVRPPIHTAGPTVAAAAAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSSVPAAPATQVIKSESPKT
IVQAVSQQQTLATAGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggatcagaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacgacggtg
cagactttgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcctgtgactgccaacccctctcctgcacctgctgttgcccctctcgttaac
aatggacccggatccgtggggaaaggaaacgctgttaatgctgttttgccctcagcttct
aacactgtcatccagacttctttccttaacactgctgtgtcctccgcgtcctcctcgtcg
cccacggtgatctcctcgcagccagcggccagcgttggcaccggggcgcccacggtgacg
ctggtgaggccccccatccacacagcaggacccacggtggctgcagctgctgcagccact
cagaacgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttccctccagacgtcacttgtgaacagccagtct
ggttccagtgtgccagcagctcctgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtgtcccagcagcagacgctggctactgctggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctctccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacacccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccaaggactccaacaccaaccacaagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccgactaac
attcagaattttcagttaccaccaggcatggtcctggtgcgcagtgagaacgggcagctg
ctgatgatcccccagcaagccctggcacagatgcaggcacaggcacacgcccagtctcag
cctcagaacactctgactcctcgtcctgctacacctaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacacccattattgcacgacaggtgacaccaactactatc
atcaagcaagtgtctcaggctcaaaccacagtgcaacccacgaccacgctgcagcgcccc
ccggttgtgcagcctcagattgttctgggtggtactgcacaaacaaccacgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacggccacctcc
actgctgccacagaaactatggaaaatgtgaagaagtgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaaacagtccacagagactgcggctaacgtgaaggaatta
gtacagaatctgctggatggaaaaattgaaccagaagactttaccagtaggctctacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccg
acgacgcaggcgacgatagccacgatcccgtcggcggcggccgtgctgctgagctcctcg
gtgcagcgcacggcgggcaaggccactgccactgtcaccagtaccctccagcaacccgtc
atcagcctcactcagcccacacaagttggtgtcagtaaacaagggcagtccacgccactg
gttatccagcagtctcaaaaagcaggggcattgataaggcctccacaagtaacattgaca
cagacacctatggtggcattgcggcaaccacacagtcgtattatgctcaccacgcctcaa
atccagctgaatcagcttcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagctcgtgggcaca
ttaacaaggtcttgtaaagatgaaaccttccttttcccagcacctttacaaagaaggata
ttagaaataggtaaaaaacatggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatatgaacaagcaagtgacgtccgggca
cagctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagaacagctt
aggttgaaacagaaggccaaggagatgcagcagcaagagctagcacaaatgagacagagg
gatgccaacctgactgcgttagctgccatcggtcccaggaagaaaaggaaagtagattca
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
DBGET
integrated database retrieval system
