Passer montanus (Eurasian tree sparrow): 120507580
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Entry
120507580 CDS
T07277
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120507580 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoa04131
]
120507580 (SCARF1)
Membrane trafficking [BR:
pmoa04131
]
Endocytosis
Phagocytosis
Scavenger receptors
120507580 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
120507580
NCBI-ProteinID:
XP_039576330
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MESARPILCLQLWLWVQSSAQELDPEGRNVCRFPAGPECCPGWRQEGRACTVAVCEGEDA
CREGEVCVKPGLCRCKPGFFGADCSSRCPEQYWGHDCKRSCPCHPNGRCDPVSGHCTCDP
NHWGGLCQFPCQCGPHGHCDPLTGACHCEPGWWAPSCRKQCQCNPSTSHCDPLTGLCRCL
PGWWGRRCSFKCSCNVSPCAQETGKCECLPGYWGPACQRRCDCGHGSCSPVTGHCSCEPG
YQGRSCRDPCPAGKYGSQCVHSCGSCKRSQPCSPVDGFCLACQPGWNGTLCKDPCAPGFH
GDGCLQPCPRCQHGEPCDPQSGSCLRCDPGWMGASCNSSCPVGTFGDGCQFLCPECVSGS
CDPVTGVCICQAGYWGESCNDTCPEGYFGVNCSSPCHCSRGTCDPVQGDCVLSLKDHGAL
AASILVPLLLLLLCVACCCCGASSADARDRAAVPDDDVVARMKHHVQGVLANLSALMPCF
NLGTSKLPKVTVSHHDMEIPYNPSFIEPPSSAWVSDSSFSSFDTDNEGPEYSVPPREGIP
LLGGAELQDGASPAGEALPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAA
ETPSPSRKPKAPWGPSRLTPPPGDAAAEPPSENPASDGYENPEPLSKGEESHRPSPRATP
GGRRRVVSSTRHVAQRVEALEAAARCGSWEAKGKEPNVTTIYMMVGTAGQDPKAEGTGEG
PVQAVLKRLGSLQRGKWAAKEEPKVRRSMEAIQKPPRRALAQRRDSESSCRQRDSVPGAP
AESAPGKQQHPAAKRLSLLLASLSSKNTGAQDGASETAGATEKGKSPELVGSLERKGQAG
AEEEPKYENVASSGADSPSGPGKEPPAAPPAT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgcccggcccatcctctgcctccagctgtggctgtgggtgcagagctctgcc
caggagctcgaccctgagggcaggaacgtctgcaggttcccggccggcccggagtgctgt
cccggctggaggcaggaggggagggcgtgcacagtcgccgtgtgcgagggggaggacgcc
tgcagagagggcgaggtgtgcgtgaaacccgggctgtgccgctgcaaacccggcttcttc
ggagcagactgcagctcccgctgccccgagcagtactggggccacgactgcaagcggagc
tgcccgtgccaccccaacgggcgctgcgaccccgtcagcggccactgcacctgcgacccc
aaccactggggagggctctgccagttcccgtgccagtgcggcccgcacggccactgcgac
ccgctgaccggcgcctgccactgcgagccgggctggtgggcaccgagctgcaggaagcaa
tgccagtgcaacccctccacctcccactgcgaccccctgaccgggctgtgccgctgcctg
ccgggctggtggggcaggaggtgcagcttcaagtgctcctgcaacgtctcgccctgcgcg
caggagacgggcaagtgcgagtgcctgcctggctattggggaccggcgtgccagcggcgc
tgcgactgcgggcacggctcctgcagtcctgtcaccggccactgcagctgcgagcccggc
taccagggcaggagctgccgggatccctgtccggcggggaaatatggatctcagtgcgtg
cacagctgtgggagctgcaagcgcagccagccctgctcacccgtggatggtttctgcctg
gcctgccagcccggctggaacgggaccctctgcaaggatccctgtgctcctggattccat
ggggatggctgcctccagccgtgtccccgctgccagcacggggagccctgtgacccccag
agcgggtcctgcctgcgctgtgaccccggctggatgggagccagctgcaacagctcctgc
cccgtgggcacctttggtgatggctgccagttcctctgccccgagtgtgtttcggggagc
tgtgaccccgtgacaggagtttgcatctgccaggcaggctactggggagagagctgcaac
gacacctgtcctgagggctattttggagtgaattgttcctcaccctgccactgctcccgg
gggacctgtgaccctgtgcagggtgactgtgtgctgagtttgaaggaccacggagccctt
gcagcctccatccttgtccctctcctgctgctgctgctctgtgtcgcctgctgctgctgt
ggtgccagctcagcagatgccagagacagggcagctgtgccagatgatgatgtggtggcc
aggatgaagcaccacgtgcagggggtgctggccaacctcagtgctctcatgccctgcttt
aacctgggtacctcgaaacttcccaaagtcacagtttcccaccacgacatggaaatcccc
tacaaccccagcttcatcgagcccccatcgtctgcgtgggtgtcagacagctccttctcc
tccttcgacaccgacaacgagggacccgagtactccgtccctcccagagaaggcatcccg
ctgctgggcggggctgagctgcaggatggggcatcccccgctggcgaggcgctcccggac
ccgtccgccttcgactccgaggatgtctcgcagcccttcgccatcccccgcacctccagc
atcgccaaggccaagcgaccctctgtgtccttcgccgaggggacaaaattcggggctgcc
gagacccccagccccagccgcaagcccaaggccccgtggggcccgtccaggctgacccca
ccgccgggggacgcggcggccgagccccccagcgagaacccggccagcgatggctacgag
aaccccgagcccctcagcaagggggaggaaagccaccggccatcgcctcgggccaccccg
gggggacggcgcagggtggtgtccagcaccaggcatgtggcccagagagtggaggcgctg
gaagcagctgcgagatgcggcagctgggaggcgaaggggaaggagcccaatgtcaccacc
atctacatgatggtgggcacggccgggcaggaccccaaggcggaggggactggcgaggga
ccggtccaggctgtgctgaagcgtctgggcagcttgcagaggggcaagtgggctgcgaag
gaggagcccaaggtgaggaggagcatggaggccatccagaaacctcctcgccgggccctg
gcgcagcgcagggactcggagagcagctgcaggcagagggacagtgtgccgggggctcct
gccgagtcagcccctggcaagcagcagcatcccgctgcgaagagactgtccctgctcctc
gcatctctctcgtcaaaaaacaccggtgcccaggacggggccagcgaaaccgcaggtgcc
acagagaagggcaaaagcccggagttagttggcagcctcgaaaggaaggggcaggctggc
gcggaggaagagccgaaatacgagaacgtggccagcagcggtgctgattcgccctccggc
cccggcaaagagccgccggccgcccctccggccacctga
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