Passer montanus (Eurasian tree sparrow): 120507639
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Entry
120507639 CDS
T07277
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03030
DNA replication
pmoa03420
Nucleotide excision repair
pmoa03430
Mismatch repair
pmoa03440
Homologous recombination
pmoa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120507639 (RPA1)
03420 Nucleotide excision repair
120507639 (RPA1)
03430 Mismatch repair
120507639 (RPA1)
03440 Homologous recombination
120507639 (RPA1)
03460 Fanconi anemia pathway
120507639 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120507639 (RPA1)
03032 DNA replication proteins [BR:
pmoa03032
]
120507639 (RPA1)
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120507639 (RPA1)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120507639 (RPA1)
DNA replication proteins [BR:
pmoa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120507639 (RPA1)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120507639 (RPA1)
MMR (mismatch excision repair)
120507639 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
120507639 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
Motif
Other DBs
NCBI-GeneID:
120507639
NCBI-ProteinID:
XP_039576479
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSVRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEDERLSARCVCQVNRFIVNSLKDGRRVVILMDVNVLQTADQVAGPIGNPQPYNEG
QGQRPAAPAGNPAASKPQQQNGNLSGAGPPAPKYHAPSNQFGKASAPSALKTPGGSQIKV
VPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADK
FFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVS
ISDLENTPKDSIVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGNE
AEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLEC
ASISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQWVTCFQDTAEFILGQNA
AFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSK
RLIANIRRNAQLG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggggccatcgcggccataatgcaaggggaggaggtcagc
aagcccgtgctgcaagtgatcaatacacgggctattgccacaggaactgggcccccacgg
taccgagtgctgatgagtgatggggtgaacactctctcctcattcatgttggcaacacag
ctgaactccctggtggaagacgaacgcttgtcagcccggtgtgtttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggtgatcctgatggatgtaaatgtc
ctgcaaactgctgatcaggttgctgggcctattggcaatccccagccgtacaatgagggg
caagggcaacgtcctgcagctccagcaggaaacccagcagccagcaaaccacagcagcaa
aatggcaatttgtctggagcaggtcctcctgctcccaagtaccacgctccctccaaccag
tttggaaaagcgagtgctcccagtgccctgaagacacctggggggtctcagatcaaagtg
gtgccgattgccagcttgaatccataccagtccaagtggaccatttgtgctcgtgttacc
cagaaaggtcagatccgcacgtggagcaactctcgtggggaaggaaagctcttttccata
gagctggttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaag
ttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaagact
gctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgagact
tcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgtatcc
atctctgacttggagaacacgcccaaagactcgattgttgatgtaattggaatttgcaag
agctacgaagatgtcactaaaattatagtgaaagctaacaatagggaggtttcaaagagg
aacgtgcatctgatggatacatcagggaaactggtgacagctacactgtggggaaatgag
gctgaacagtttgatggttccagacaacctgtgattgccatcaaaggagcccgtgtctct
gactttggtggcagaagcctgtctgtcctgtcctccagtacagttgtcatcaaccctgat
agcccagaggctttcaagctccgaggatggtttgactccgaggggcagcttctggaatgt
gcctccatctctgatgtgaggggtgggccagcagctggagcaaataccaattggaaaact
ttgtttgaagccaaatctgagaacttgggacaaggagataaggcagattattttagctgt
gtgggcacaattgtacatctgcgcaaagagaactgcatgtaccaggcatgtccctctcag
gattgcaacaagaaagtgatagaccagcagaacggactttaccgctgcgagaagtgtgac
cgcgaattccccaacttcaaataccgcctgatgctgctggtgaccattgcagactgtctg
gagtatcagtgggtgacttgttttcaagacacagcagaattcattcttggccaaaatgca
gctttcctgggagaactgaaggaaaagaatgagcaggcttttgaagaagtgttccaaaat
gcaaacttcaacacctacgagttcaggatccgggtgaaactggagacttacaacgatgaa
tctcgcattaaggccacagcaatggacgtcaaacccgtgaactacagagagtacagcaag
aggttgattgccaacatcaggagaaatgctcagctgggatga
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integrated database retrieval system
