Passer montanus (Eurasian tree sparrow): 120507931 Help Entry 120507931         CDS       T07277                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism pmoa  Passer montanus (Eurasian tree sparrow) Pathway pmoa03040   Spliceosome Brite KEGG Orthology (KO) [BR:pmoa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120507931 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pmoa03021]     120507931 (SF3B3)    03041 Spliceosome [BR:pmoa03041]     120507931 (SF3B3)    03036 Chromosome and associated proteins [BR:pmoa03036]     120507931 (SF3B3) Transcription machinery [BR:pmoa03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      120507931 (SF3B3) Spliceosome [BR:pmoa03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     120507931 (SF3B3)  Complex B     120507931 (SF3B3)  Complex C    U2 SnRNP specific factors     120507931 (SF3B3) Chromosome and associated proteins [BR:pmoa03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      120507931 (SF3B3)     TFTC complex      120507931 (SF3B3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd Beta-prop_BBS7 WDR55 Motif Other DBs NCBI-GeneID:  120507931 NCBI-ProteinID:  XP_039577035 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacctaacgctgcagcgtgccacaggcatcagctttgctatccatggc aatttctcaggcaccaaacaacaagaaattgttgtttcccggggcaagatcctggagctg ctccgccctgaccccaacacggggaaggtgcacactctgctgaccgtggaggtgttcggg gtcatccgctcgctcatggccttccggctcaccgggggcaccaaggactacatcgtggtg ggcagcgactcgggccgcatcgtcatcctggagtaccagccctccaagaacgtcttcgag aagatccaccaggaaaccttcggcaagagcggctgtcgcaggatcgttccgggccagtac ttggctgtggaccccaagggccgcgccgtcatgatcagtgccattgaaaagcagaagctg gtgtatatcctgaacagagatgctgctgctcgactcaccatttcctccccactggaagcc cacaaggccaataccttggtctaccacgtggtgggagtcgacgtggggtttgaaaaccca atgtttgcttgtctggaaatggattatgaggaagcagacaacgacccaacaggtgaagct gcagccaacacacagcagacattgacgttttatgaattggacttgggtttgaaccatgtt gtcaggaaatacagtgagcccctggaagagcatggcaacttcctcataacagttcctggt ggttctgatggccccagtggggtgctgatctgttctgaaaactatattacttacaaaaac tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac ccagagaggggtatgatctttgtctgctctgctacacataagaccaagtccatgttcttc ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac atggtaacagagattcgactgaagtactttgacactgttcctgttgctgctgccatgtgt gtgctgaaaacaggatttctctttgtggcatctgaatttggaaaccattacctgtaccag atagctcacctgggggatgatgatgaggagccagagttttcttctgccatgcctcttgag gaaggagacacattcttttttcagcctcgacctctgaagaacctggtgttggtggatgag ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca ccccagttgtatgtggcttgtggtcgggggcccaggtcatccctgagggttttaagacat ggacttgaggtatctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg actgtgaggagacatgttgaagatgaatttgatgcctacattattgtgtccttcgtaaat gccaccctggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg ggtactacaccgaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat ccagatgggattcggcacatccgagcagataaaagagtaaatgaatggaagacaccaggg aagaaaaccattgtaaaatgtgctgtgaaccaaagacaagtagtgatagcactgactgga ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacggagaga aaggagatgtcggctgacgtcgtgtgcatgagcctggccaacgttccccctggggagcag cgctcccggttcctggctgttggactggtggacaacactgtcagaatcatttcactggac ccttcggattgtttacagcccctgagtatgcaggcactgcctgcacagcccgagtcactg tgcatcgtggagatgggtggcacagagaagcaggatgagctgggagagaggggctccatt ggctttctgtacctgaacattggactgcagaacggtgtgctgctgcgaaccgtgctggac cctgtcactggtgacctctctgacaccaggaccagatacctcggctcccggccggtcaaa ctcttccgtgtccgcatgcaaggccaggaggcggtgctggccatgtcgagccgttcctgg cttagttattcctatcaatcccgcttccacctgactcccctgtcttatgagacactggag tttgcatctggctttgcttctgagcagtgccctgagggcattgtggccatctccacaaac acattgaggattttggcactggagaagctgggagcagtcttcaaccaggttgccttccca ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacctgatcatcatt gagacggaccacaatgcttacactgaggccaccaaagcacagaggaagcagcaaatggct gaggaaatggtggaggctgcgggtgaggatgagagggagctggctgcagagatggctgca gcctttctgaacgagaatcttcctgagtccatctttggtgctcccaaggcagggaatggt cagtgggcctctgttatcagagtgatgaatcccatccagggcaatacattagatctggtt cagctggagcagaatgaagctgctttcagcgtggctgtgtgccggttctccaacaccggt gacgagtggtacgtgctggtgggagtcgccaaggacctgattctcaacccacgctcagtt gctggggggtttgtctacacgtacaagctggtgaatagtggtgagaagctggagtttctg cacaagacccctgtggaggaggtccctgcagccattgctccattccaaggccgagtctta attggagttgggaagctcctgcgtgtgtatgacctgggcaagaagaaactgcttcggaaa tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg attgtttcagatgttcaggagagtttcatctgggtgcgttacaaaaggaatgagaaccag ctcattatctttgctgatgacacttacccccggtgggtcactacagcaacactcctggat tacgacactgtggctggagcagacaagtttggtaacatctgtgtggtgagattgcctccc aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacagaggc ctgcttaatggagcatcacagaaggctgaagtgattatgaattatcacgtgggagaaacg gtgctttccttgcagaagaccacgctgattccaggaggctctgaatctcttgtttatacc accttatcagggggcataggaatcctggtcccttttacttcccatgaggatcacgacttc ttccagcacgtggaaatgcacttacggtccgagcaccctccgctctgtggacgggaccat ctcagcttccgctcctactacttcccagtgaagaacgtgattgatggggacctgtgtgag cagttcaactccatggagcctaacaaacagaagaatgtggccgaggagctggaccggacc ccacccgaggtgtccaagaagctggaggacatccgcacgcgctacgcgttctga

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