Passer montanus (Eurasian tree sparrow): 120508161
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Entry
120508161 CDS
T07277
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120508161 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120508161 (EDC4)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120508161 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
120508161 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WDR55
Motif
Other DBs
NCBI-GeneID:
120508161
NCBI-ProteinID:
XP_039577473
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MASCSSIDIEDATQHLRAGPGSRSALPAEPAARSGRAGSVNENQRPSNSYNGDLNGLLVP
DPLGSGDGPALAKPVHRSISLGALQEKQVICLSGDDSSTCLVISAKDVEVVASSDSSITS
KARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERT
LLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLAMEKEKIQEEILVNIKRPDNTPLN
TFRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPDIKEGF
IVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSC
LLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMNILPSL
KVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRC
RLRHTEVLPAEEENDNLSVEGAQGSGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPD
TSASMPTHGSHEEFAFPDHMADLSTEGLGSEKESVHGSQPDLRRIADLPVPADFLSLSSD
AKPKLMTPDAFMTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVTDASLPRASEDLTVSPK
MQLDTSLTLSSSSSSLQTSPRSHPVLIPGLPDKLTPKAPVPVAPGNSSLALELQEVEPLV
VPQASPTRERSPDVISSASTAMSQDIPEIASETLQRSFAAAAPGLPGEGLEPGHHADSMA
SAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWP
AAPDITRETRNSMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLA
STSGGFGAKASAQRLPVKDWKVKASPRASPKLKRKGKKDDGDMNQSPRSSNNQVTPEFQD
EVMCLLRSQQRELSELRQNQMELLQRLTDHLDAIQSSLMGHMERVIDSQQEQEQRRLDRV
LMEGQQRNGQLQEHLSQQLSQSLSTAVCSRLERTVREEMKKTVPQCISKSMDPTVSQLSN
TIATKLTAVEGTLKENITKLVKSKNLTDSVVRATADTLQGPIQSAYREAFQSVVLPAFEK
SCQSMFQQINDTFKQGTQEYIQQLEAHLKNKKVREQEVREPLLAQLRQLLSTFQSSTEQL
ASSIAASVHAELQHQLHVIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRS
AAGTPIPSTHMDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQ
HPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEDAVMHLDQSDPITRDHMGSVMNQVRQK
LFQFLQAEPHNPLSKPARRLMIMLQGLVTPGMT
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgctccagcatcgacatcgaggacgccacccagcacctgcgggcagggccg
gggtcccgctcggcgctgcccgcggagcccgcggcgcggagcggccgtgcaggttcggtg
aatgagaaccagagaccgtcgaattcgtataacggggacctgaatgggctgctggtgcct
gatccccttgggagtggagatggacctgctttggccaagccagtgcatcgcagcatctcc
ctaggagccctgcaggagaagcaagtcatctgcctttctggtgatgacagctccacatgc
ttagtgatatcagcaaaagacgtggaggtggtggccagcagtgattccagcatcaccagt
aaggccagagggagtaacaaggtgaaaatacagcctgttgctagatatgactgggagcag
aaatactattatggcaatctgatagctgtctcaaactcctacctggcttatgccattaga
gctgccagcaatggctctgccatggtgcgggtgttgagcgtgagcactgctgagcggacc
ttgctgaagggattcacgggaggcgtggcagacctggcctttgctcacctcaactccaac
cagctggcctgcctggacgaggctggcaacctttttgtctggcgcctggccatggagaaa
gaaaaaatccaagaggagatcctggttaacatcaagcgacctgacaataccccactgaac
accttccggagaatcatctggtgccccttcatccccgacgacaacgaggagagcggcgag
gagggaagtcagaccttggcgttgctgcatgaggacagggcagaggtgtgggatttggac
atcatccgaaccaacaacagctcctggccggtggaagtgcctgatatcaaagaaggtttc
attgtggtgaaaggccacagcacgtgcctgagcgagggagcactttctccagatggaact
gtgttggccacagcaagccatgatggttttgtaaaattctggcagatctatattgaggga
caggatgagccaaggtgtcttcatgaatggaaaccccatgatggtagacctctttcctgc
ctgctcttttgtgacaaccataaaaaacaagacccagaagttcccttctggaggtttctc
atcacaggagctgatcagaacagagagctgaagatgtggtgcacggtgtcctggacctgt
ttgcagactgttcgattttctcctgacatcttcagctccatgaatattcttcccagcctg
aaagtctgcctggacctttccgctgaatatctgatactgagtgatgtgcagagaaaagtc
ttgtatgtgatggagttgatgcagaaccaagaggagggcaaggcttacttcagctccatc
tcagagttcctccttacccacccagtgctgagctttggcatccaggccgtgagccgctgc
cggctacggcacaccgaggtgctcccagcagaagaggaaaatgacaacttgagtgtagaa
ggtgctcagggctctggggctgttgaatcagcagcgggtgtgctgataaaactcttctgt
gttcacaccaaggccctacaggatgtgcagattagattccagcctcttcatagccctgac
acaagtgcttccatgcctacccatggctctcatgaagaatttgcctttccagaccacatg
gctgatctgagcacggaagggctgggctctgagaaggagtctgtgcacggctcgcagcca
gacctgcggcgtatcgctgatctgcccgtgccagcagacttcctttccctctccagtgat
gccaaacccaagctgatgactccagatgcattcatgacaccaagtacttctcttcaacag
attgctgtatctccaggcagcagtgtcagttccctgactgcagtcacagccatgagcagc
acttctgtcacggatgcctctctgcccagagcttcagaagacttgactgtgagccccaag
atgcagctggacaccagcctcacgctgagcagcagcagcagcagtctccagaccagtccc
aggagtcaccctgttcttatcccaggcctccctgacaagcttacaccaaaggcacctgtt
ccagtcgcaccaggaaactcctctctagcactggaactgcaggaagtggagcccttggtg
gtgccccaggcttctcccacccgtgagcgctccccagacgtcatttcctctgcttccaca
gccatgtcccaggacatcccagagattgcttccgagaccctgcagcgcagctttgcggcg
gctgcgcccgggctccccggggaggggctggagcccgggcaccacgcagacagcatggcc
tcagctgcctctgccttgcacctgctgtcccccaggaaccgccacaactccgagcacagc
caccactctttggacatgcctccagtggaggtggacagactgaatgctccatccttactg
gagactgctttaactcaggaaaatgcatcttctgacagtgttgtgagtcagccgtggccg
gcagctccggacataacccgggaaaccaggaacagcatggcagacagcccaagggatgag
gttgaagaaaagcacaagagctcttcctaccatcgacatagctaccaccttctgcagcat
gacagccaggatgccagtgcagagcaaagtgaccacgatgatgaagttgcaagcttggct
tctacgtcaggtggatttggtgccaaagcatctgcacagaggctgcctgtgaaggactgg
aaagtcaaggcatccccccgggcttccccaaagctcaagaggaagggcaagaaagatgat
ggggatatgaaccagtcaccaagatcatctaataaccaggtgacaccggagttccaggat
gaggtgatgtgcctcctgaggagccagcagcgggagctctccgagctgcggcagaaccag
atggagctgctgcagaggctcacagatcacctcgatgccatccagagctccctcatgggc
cacatggagagggtgatcgactcccagcaggagcaggagcagagaagactggaccgggtg
ctgatggaggggcagcagcgcaacgggcagctccaggagcacctgtcccagcagctgtcc
cagtctctgtccacagccgtgtgcagccgcctggagaggaccgtccgcgaggagatgaag
aagacagtgccccagtgcatttccaagagcatggatcctactgtcagccagctcagtaat
actattgctaccaagctcactgctgttgaggggacactgaaagagaatattaccaagcta
gtgaaatcaaagaaccttacagacagtgttgtgagggccacagctgacactctgcaggga
cccatccagtcagcctacagggaggccttccagagcgtcgtgctgcccgcctttgagaag
agctgccagtccatgttccagcaaatcaatgacaccttcaagcagggcacacaggaatac
atccagcagctggaggctcacctgaagaacaagaaggtgcgggagcaggaggtgcgggag
ccgctgctggcgcagctgcggcagctgctcagcaccttccagagcagcacggagcagctg
gcctccagcatcgcggccagcgtgcacgccgagctgcagcaccagctgcacgtcatcgtg
ggcaacatgcaggagtctattttggcccaggtgcagagagtcattaaaggagaagtgagc
ctggctatgaaggagcagcaggcagctgtcacctcgagcatcgtccaggcaatgcgctcg
gcggccgggacacccatcccctctactcacatggatttccagtcccagcagactcacatc
cttcagctgctccagcagggacacctcaaccaagctttccagcaggctctaacagcagct
gatctcaacctggttctctatgtctgtgagactgtggatactcagcaagtatttggacag
catccatgcccactgtcccagcctgtgctgctctccctcattcagcagctctcctcagat
ctgggcactcgtacagaactgaagttgaactacttggaggatgcagtgatgcaccttgac
caaagcgaccccatcacccgagaccacatggggtcagtcatgaaccaggtgcggcaaaag
ctcttccagttcctccaggcggagccccacaaccctctgagcaagcctgcgcgtcgcctc
atgatcatgctgcagggcctggtcacccctggcatgacctag
DBGET
integrated database retrieval system
