Passer montanus (Eurasian tree sparrow): 120508349
Help
Entry
120508349 CDS
T07277
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04270
Vascular smooth muscle contraction
pmoa04625
C-type lectin receptor signaling pathway
pmoa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120508349 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120508349 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
120508349 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoa04131
]
120508349 (ARHGEF12)
Membrane trafficking [BR:
pmoa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120508349 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
120508349
NCBI-ProteinID:
XP_039577781
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
MSGTQSTITDRFPLKKPSRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDLAAFGHMSPIMASPHSP
GTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQVLQEEYSRTPSTRLLKEI
QEAKKHIPQLQEQLSKATGCSQDGVLSSRSASESLQISEGEAESGDSGSKLDFSGDSPSR
PNSDIADSPRSGLKERIYPDESPEKAELQDTDSQCSVGSPLARVGTQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPEEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELSRLDAERLRDRNAVEKERSCAEQILAKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHSPTASSVSPEPPESSKMRQSGSSSDGTDAPYPP
ANPMSPLAMGPFASPEGSKDSDTGVKQPGEAPPASDSMDGTPRTPNNTFEFPSPLENLQE
EEGESERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSDKRKIFSNLEDILGLHV
ALNDQMKSVRKRNETSVIGQIGEDLLSWFSGPAEEKLKLATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSATGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNPQSSSPIMSEKAK
VEGLLGAEGQFEKVQQAELALKDSSACFEHPASSSASLPEGQWARDALRNLGLLKQLLVQ
QLGLAEKGTLEDRQRLPRFRSVSQEAQTESGNELQPPESKLQQPGEDRALGRTAEAAGGH
GARTAAECPASGDAMQLVGTEPPARGALPMDSMNLEGSSSELEGLGAEESGEHFFDAREA
HSDENPGESELLDRKEEEEEEEEEEEEEEVQIRISGNYLILDGYGTVQESSTDEEVSALV
LQCTSHRQPPLECPQQQQQCPLSPRDARSDGGSSPFPEELRWAGLEEPCPFLGSPQLPLQ
TRVQLMQYIHNIQDALEKLKEVEEDYSVLRRQGLAGSASTGEHSDKS
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaaccttcgagacac
ggcagcattctgagcagagagtctccagcagacaagaagcagaaggttgaacgctgcagc
agcacccacgacttcgatcccacagatagctcctccaagaagacaaagtctagttctgag
gagagtagatccgagacgtatggcctggtgcagaggtgtgtggtgatccagcgggatgag
aacggcttcgggctgacggtcagcggggacaaccccgtcttcgtgcagtctgtcaaggaa
gatggagcagccatgcgggctggagtgcagacaggtgatagaattatcaaggtgaacggg
actctggtaacacactcgaaccatctggaggtggtcaagctgatcaagtctggttcctat
gtagctctcactgtccaggggcgccctccagggtcgccccagattcccttggcggattct
gacgtggatctggcagcttttgggcatatgtctcccatcatggcatccccccactcgcct
ggcacgtcagggaatgcagaaaggatcaccagcccagtgctcatgggggaggagaataac
attgtccacaaccagaaggtggagattctgaggaagatgctccagaaggagcaggagagg
ctgcaggtcctgcaggaggagtacagccggaccccctccacccgcctgctcaaggagatc
caggaggcaaagaaacacattcctcagctgcaggagcagctgtccaaggccacgggctgc
tcccaggatggagtcctgtcctccaggtctgcgtcagagtcgctgcagatcagcgagggg
gaggcagagagtggggacagtggcagcaaactggatttcagtggtgacagcccctccaga
cccaacagtgacattgctgatagccctcgcagtggcctgaaggagaggatttatccagat
gagagcccagaaaaggctgagcttcaagacactgactcccagtgcagtgttggaagtccc
ctggcccgagtggggactcagatcattggagcagaggatgatgattttgacacggagcag
gagcagatcaatgggcagtgcagctgcttccagaacatcgagctcctgaaatcccgcccg
gctcacctggctgtcctcctgcaccacgtggtgtcccagtttgaccctgcagcactgctg
tgctacctttacacagacctgtacaaacagaccaactccaaagagacccggcgtgttttc
ctggagttttaccagtttttcctggacagagctgcaaacctgaaagtcccagttccagag
gaaatctccttggaattagacaggaggaggccagagctcctccctgaagagctgcaccgc
cagttcatccaaaccatgcaggataaagtctgcccagaggttcagaggaacctggaagat
ttcaggcagaagaggagcatggggctgaccctggccgagggggagctgagcaggctggac
gcagagcggctccgcgaccgcaacgccgtggagaaggagaggagctgtgcagagcagatc
ctggccaaaatcgaggaggtcctgatgacatctcagcctctggaagaagacaagagctcc
acgatgcaatatgtgatcctcacctacatgaaacacctgggagtgaaagtcaaagagcct
cggaacctggagcagaagcggggccgcatcggtttcctgccaaagatcaagcaaagcatc
aagaaagagaaagaaggagaggagaaggggaagaggagaggcttccccaacattctgggt
ccccccaggagaccgagccgacacgacagcagtgcaattggcagggccatggagatgcag
aagcccaggcaccccaagcactcacccacagcctcttctgtgagcccagagccccccgag
tccagcaagatgcggcagagcggctcctccagcgatggcacagatgccccttacccccct
gccaaccccatgtcccccctggccatggggccctttgcctctccagagggcagcaaggac
agtgacacaggtgtgaagcagcctggggaagccccacctgccagtgactccatggatggc
acccctcgcacacccaacaacacctttgagttcccatctcctttggaaaacctgcaggag
gaggagggagagtctgagaggatggttgacatgggaacgccgaagccttttcgcaagatg
gacagtgttggctttgcagatgtgcagagtgaggatgagctctatgacttcgacatggac
atggaccctcccaactggcagcagcttgtgagcagggaggtgctgatggggctcaaaccc
tacgaaatcaaacgtcaggaagtgataaatgagctgttctacacggagcgagcccacgtg
cgcacgctgaaggtcctgcacaacgtcttctaccagagggtcaccagggagggcatcctc
agctccagtgacaagcgcaaaatcttctccaacctggaggacatccttgggctgcacgtt
gcactgaacgatcagatgaaatctgtccgaaaaaggaacgagacttctgtcattggccaa
attggggaagatttgctctcctggtttagtggaccagcagaggagaagctgaaacttgcc
actgccaccttctgcagcaaccagccctttgccctcgaggtcatcaagtcccgccagaag
aaggactcgcgcttccagaccttcgtgcaggatgctgagagcaatcccctgtgccggcgg
ctgcagctcaaggatatcatccccacagagatgcagaggttgactaaatacccccttctg
ctggataacattgctaaatacacagagctgcctgaggagaaggagaaagtcaagaaagca
gcagatcactgccgccagatcctcaaccacgtgaaccaggctgtcaaagagtcggagaac
aaacagcacctggaggattatcagcggcgactcgacctctcctacttgaagcagtcagag
gatcccatgatggatgagttcaggaacctggatctaacaaagagaaagatgctccatgaa
gggcccttgacctggaaggtgaatcgtgacaaaaccatcgatctgtacactctgctgctg
gaggacatcctggtgctgctgcagaaacaagatgacaaactggtgctgaagtgccacagc
aagatcctggcatccacagctgacagcaagcacaccttcagccccatcatcaaactcaac
actgtgctggttcgccaggtggccacagataacaaagctttcttcgtcatctccatgtcg
gcgacgggggctcacatctacgagctggtggcacagactgtctcagagaagaatgtctgg
caggacctcatagctcagatggcaggaactgtgaagatgggcagcagcagaagagtgatc
ccactgcctcagtcaggccctggcgaagaggagcgtgaggaagaggagcagcagaagctg
aaagagcagcatgacattcctgccagcagcctgcaaagtccagataaagatttgggcctg
gagtctcccttgatactgaaccctcagtcctcttcacccatcatgtctgagaaggccaag
gtggaggggctgctgggggctgaggggcagtttgagaaggtgcagcaggcagagctggca
ctgaaggactcctctgcctgctttgaacacccagccagcagctcagcctcactgccagag
gggcagtgggcacgggatgccctgaggaacttggggctgctgaagcagctcttggtgcag
cagctgggcctggcagagaagggcaccctggaggacagacagcgcttgcccaggttcagg
agcgtgtcccaggaagcccagactgagagtggcaacgagctgcagccccctgagagcaaa
ttgcagcagcctggagaggacagagcccttggcagaactgcagaggcggcgggcgggcac
ggcgcccggactgcagccgagtgcccggcctcaggggatgccatgcagctggtgggcacc
gagccccctgcccggggcgctttgcccatggacagcatgaacctggagggctccagctcg
gagctggaggggctgggggccgaggagagcggggagcatttcttcgatgcccgggaagct
cacagcgacgagaaccccggcgagagcgagctgctggacaggaaggaggaagaggaggag
gaggaggaggaagaggaggaggaggaggtgcaaattcggatctcaggaaattatttgatc
ctcgatggatacggaacagtgcaggagagctccacggacgaggaggtgtcagccctggtc
ctgcagtgcacctcccacaggcagccccccctggagtgtccccagcagcagcagcagtgt
cccctgtcccccagggacgcccggtcggacgggggcagctcgcccttccccgaggagctg
cgctgggcagggctggaggagccctgtcccttcctgggcagcccccagctccctctgcag
acccgagtgcagctcatgcagtacatccacaacatccaggatgccctggagaagctaaag
gaggtggaggaggattacagcgtgctgcgacgccaggggctggctggctcagcctccaca
ggagagcactcagacaaaagctag
DBGET
integrated database retrieval system
