Passer montanus (Eurasian tree sparrow): 120508629
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Entry
120508629 CDS
T07277
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04382
Cornified envelope formation
pmoa04510
Focal adhesion
pmoa04512
ECM-receptor interaction
pmoa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120508629 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120508629 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120508629 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120508629 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoa04147
]
120508629 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pmoa00536
]
120508629 (COL4A3)
Exosome [BR:
pmoa04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120508629 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pmoa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120508629 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120508629
NCBI-ProteinID:
XP_039578349
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MAGGGCPGRLAPVLLLALLWPGRAAAENCVCKGKSPCFCDSTKGSKGEKGFPGVPGPPGQ
RGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGVPGIPGFSGPPGLPGEPGTVGPPGLPGV
PGCNGTKGDQGFPGPPGRRGAPGLPGVAGIKGEKGTPAEGYSQEYGAKGDPGLPGMPGLQ
GAQGAQGYPGELGPQGPPGSLGMPGKPGPPGPKGLMGLKVIGAKGRKGDTGLTGPPGPPG
TVIVTLTGPDNMTDLKGEKGEKGSRGPPGPMGFTGPVGDSQSEKGDRGEPGAQGKPGKEG
APGPPGLPGQKGEQGKPGLAGRQGAKGMKGNPGPPGACGRMEYYDYVVGEKGDEGPPGPP
GPKGQRGMPGPQGPPGAAGRPGVSRPGLRGPPGFPGPKGAKGERGQTGLCRVGPPGLPGV
TGRPGSVGLPGPPGEPGRVTFGTGLPGLPGEPGCTGPPGPPGDTGMRGDDARVCTDCSYI
PGMPGLPGSPGPRGQDGMPGREGTTGPKGSPGSPGTPGLPGAQGPPGFRGDQGRKGSKGE
PRYVRPEGPKGEQGDPGARGEKGRTGSSGFLGRPGSKGSKGSKGEKGLAGSKGDRGLPGL
PGGLGLPGEMGLPGLAGYGPQGVRGFKGSKGIPGPPGLPGEAGMKGETSRATPLPALPGP
QGPHGLPGPPGVPGRVGVRGQPGDPGLSGPTGDTGFPGLGFPGNPGPKGDKGLAGGRGPP
GCEGKIGDPGRAGNLGQPGQKGEPGMVIPGEPGRMGSPGGHGSPGSKGEGGLPGLPGLPG
HPGHDGDDGLRGDRGSPGAPGDPGFPGKPAECLIGLPGLPGGQGATGPPGGRGLQGSKGN
LGAPGLSIPGIYGKPGEPGLIGLQGNMGLPGPKGQSGRPGISGLPGARGDPGVMGLLGIP
GPPGMVGRPGNPGIQGSPGFPGIKGRKGFLGEKGEPGDKGFPGPSETLVAIGDKGEQGLK
GVRGRMGVRGEKGDVGVQGPPGADGSEGMPGPPGAKGFMGLPGIPGGQGFPGAFGDKGDM
GIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGDPGPPGVLG
SKGEMGSEGLPGLTGVPGPHGIRGETGGAGIPGQYGPPGDAGAKGCQGRPGQQGVPGPPG
AVGVPGKPGLVGERGTQGQDGMPGPPGVKGEPGPPGRGIPGFPGIPGRRGIKGDMGLPGF
PGPPGVKGHQGDRGPIGPPGLVGLPGFQGTTGMAITGQKGNRGIPGAHGRPGAPGFPGLP
GLSTLSVKGSKGVRGADGIPGPRGPAGDIGPPGPKGIEGRSGYPGARGHPGFLGFPGVKG
EKGNQGPPGPQGAEGPRGPKGQQGPPGFSGKIFSIPGSKGPAGLPGIPGTPGDQGIQGIP
GLQGPKGVKGLPGRFGHPGHPGLPGPKGDRGFPGQRGEPGLIGFPGLQGLPGSPGTTIAG
PTRKGFIFTRHSQTTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFSTM
PFLFCSTNDVCSFASRNDYSYWLSTAVVMPPDMAPISGRALEPQISSSQPNNCSSCMSRW
LDVSLEGFFFCYVHKCRLRGFWPSIGISWVLSGRISGRPIHRVPWQGDMQLLHKFLQFLV
GIIKSKENVQETSATDFESRTTREYHQSLSGLHEETNLNGGHSSQNMKLIYYKELPNSEE
L
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgggggctgccccggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggagaactgtgtatgcaaaggtaaaagtccctgcttttgtgat
agcacaaaaggcagtaagggagaaaaaggctttcctggtgttccaggtccacctggtcaa
agaggctttcctggtccagaagggcctccagggccacagggaccaaagggttctccaggg
cttacaggcttagttggacccaaaggtatacgaggagtcccaggaatacctggattttca
ggtcctccaggccttcctggtgaaccaggaactgttggtcctcctggtctcccaggtgtt
ccaggatgcaatggcacaaagggtgaccaagggtttccaggtcctccaggtcgaagaggt
gctccaggcctcccaggagttgctggtatcaaaggagagaagggtacccctgctgaggga
tatagccaagagtatggtgcaaaaggtgatcctggattaccaggaatgcctggtctccag
ggtgcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggatct
ttaggcatgccagggaaaccaggacctcctggacctaagggtcttatgggactgaaagta
ataggagccaaaggaaggaagggtgacactgggttaactggaccccctgggcctccagga
actgttattgtgacgttaactggaccagacaacatgacggacttgaaaggagaaaaagga
gaaaaaggatcaagaggacccccaggaccaatggggtttacagggccagttggtgattct
caaagcgaaaagggtgaccgaggagaaccaggagcacaggggaagcctggaaaagaaggt
gccccaggtccacctggcttaccgggacaaaagggtgaacagggcaagccaggactggct
ggaaggcaaggagctaaggggatgaaaggaaaccctggtccgcctggagcgtgtggtcga
atggagtattacgattatgtggttggtgaaaaaggggatgaaggaccccctggacctcca
ggaccaaaaggtcaacgtggcatgcctgggccacagggtcctcctggagctgctggtagg
ccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctgggccaaaaggagca
aaaggagagagaggacaaactggcttgtgtagagtaggccctccaggactgcctggtgtt
actggcaggcctggttctgttggattgccaggtcctccaggagaaccaggtagagtaaca
tttggaactggcctgccaggacttcctggagagccagggtgtacaggacctccaggacct
ccaggagatactggcatgagaggtgatgatgctcgtgtgtgtactgattgtagctacatt
ccgggaatgcctggccttcctggttctcctgggcctcgtggtcaggatggcatgcctggt
agagaaggaacaacaggtccaaaaggttctccaggttctccaggaacaccagggcttcca
ggggctcaaggacctccaggtttcagaggagatcaaggacgtaaaggatcgaaaggtgaa
ccaagatatgtacgtccagaagggccaaaaggtgagcaaggagatcccggagccagggga
gaaaaaggaagaacaggttcaagtggatttctggggagacctggctctaaaggatccaaa
ggttctaaaggtgaaaagggattggctggatcaaaaggagatagaggactacctggattg
cctggtggacttggtcttcctggagaaatggggcttcctggtctggcaggttatggacca
caaggagtaagaggttttaaaggctctaaaggaatacctggaccacctggattacctgga
gaagcaggtatgaaaggagagaccagtagggcaactccattacctgctttgccaggacct
cagggaccacatggtttacctggacccccaggagtgcctggtagggttggagtaagaggt
cagccaggtgatccaggactttcaggaccaacgggtgacacaggctttccagggcttggg
tttcctgggaacccaggtccaaaaggagataaaggacttgcaggaggcagagggccacca
ggttgtgaaggaaagattggagatccaggccgagctggaaacctaggacaaccaggacaa
aagggtgagccaggcatggttattcctggagagccaggaagaatgggttcaccaggaggt
catggcagccctggctcaaaaggtgaaggtggacttccaggactcccaggcctaccaggg
catcctgggcatgatggtgatgatggcctaagaggagatcgtggctcacctggagctcct
ggagacccaggttttccagggaaacctgctgaatgtcttattggcctgccaggtttgcca
ggtggccagggagctacaggcccaccaggaggaagaggtttacaaggttcaaaaggaaac
ctgggtgctcctggtttgagtatcccaggaatctatggaaagcctggggaacctggatta
ataggtcttcagggaaatatgggattacctggtcccaagggacaatctggaaggccagga
atctctggtttgccaggtgcaaggggagatccaggagtaatgggactgttaggaattcct
ggacctcctggcatggttggaagaccaggaaaccctggtatccaaggttctcctggcttt
ccaggaataaagggaagaaaaggatttcttggagaaaaaggtgaaccaggtgataaaggt
tttcctggaccatctgagaccttggttgctattggggacaaaggagaacaaggtttaaaa
ggagttcgaggccgaatgggggtaaggggagaaaaaggagatgttggtgtgcaaggtcca
ccaggtgctgatgggtctgaaggaatgcctggtccaccaggagccaaaggatttatgggt
cttccagggattcctggaggacaaggattcccaggtgcatttggagacaagggggacatg
ggaattccaggtccaaaaggtcagaaaggatctccaggctttccaggaccatcaggtgac
cctggtccaccaggctatggtggctttccaggtgacaaaggagatcctgggtacccatct
gctgggcctccaggagaacctggtccaaagggagatccaggtcccccaggagttttgggc
agcaaaggagaaatgggctctgagggtcttccagggcttacaggagtaccaggaccacat
gggatcagaggagaaacaggaggtgcaggaatcccagggcagtatggaccccctggagat
gctggtgctaaaggatgccagggccgcccaggacagcagggagtcccaggccctcctggt
gctgttggagtccctggaaaacctggacttgttggtgaaaggggtactcaaggtcaggat
ggtatgcctggccccccaggagtaaagggagaaccagggccaccagggagagggattcct
ggttttccaggtattcctggacgtagaggaatcaaaggggacatgggactgcctggcttt
cctgggcctccaggtgtgaaaggtcatcagggagatcgaggacccattggacctcctggc
ttagtggggttacctggatttcaaggcaccacaggcatggcaatcactggccagaaaggg
aacagaggtattcctggtgcacatggaagaccaggtgctcctggttttccaggccttcct
ggcctttccactctcagcgtgaaaggaagcaaaggtgtccgaggggcggatggaattcca
gggccaaggggcccagctggtgacattggccctcctggtcccaagggaatagaaggccga
tcaggctatcctggtgctagagggcaccctggatttcttggattcccaggtgtaaaagga
gaaaagggtaatcaaggacccccaggaccacaaggtgcagaagggccaaggggaccaaag
ggccagcaaggcccacctggattctctggaaaaatattctccatcccaggaagcaaaggt
cctgcaggactaccaggaatcccaggaaccccaggtgatcaaggaattcaagggattcct
ggactacaaggacccaaaggagtaaaaggtctaccaggacgttttggtcatccaggacat
ccaggattgcctggtccaaaaggagacaggggatttccaggacaaagaggagaacctgga
ttgattggctttccaggtctgcaggggttacctggatcaccaggtactaccattgctggt
ccaacaagaaaaggatttatctttacccgtcatagtcagacaacaaagattccttcgtgc
ccacatgggacatcccagatctatgttggctattcactgctctttgtacaaggaaatgaa
cgagcacatggacaagatcttggaacagctggtagctgcttgcagaggttcagcaccatg
ccattcttgttctgcagcaccaatgatgtttgtagctttgcttcccgcaatgactactcc
tactggctgtccactgcagtggtgatgccaccagacatggcacccatttctggcagggca
ctagagccccagataagcagttcacagccaaacaactgtagttcctgcatgtccagatgg
ctggatgtctctctggaagggtttttcttttgttatgtacacaagtgccggctcagaggc
ttctggccaagcattggcatctcctgggtcttgtctggaagaatttcgggccgtcccatt
catagagtgccatggcagggggacatgcaactactacacaaattcctacagtttctggtt
ggcatcattaaatccaaggagaatgttcaggagaccagtgccacagactttgaaagcagg
acaactagagaatatcatcagtcgttgtcaggtctgcatgaagagaccaatctaaatggt
ggccactcctcacagaacatgaaactgatttattacaaagaattgcctaactctgaagag
ctataa
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integrated database retrieval system
