Passer montanus (Eurasian tree sparrow): 120508629
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Entry
120508629 CDS
T07277
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04510
Focal adhesion
pmoa04512
ECM-receptor interaction
pmoa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120508629 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120508629 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120508629 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoa04147
]
120508629 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pmoa00536
]
120508629 (COL4A3)
Exosome [BR:
pmoa04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120508629 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pmoa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120508629 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120508629
NCBI-ProteinID:
XP_039578349
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MAGGGCPGRLAPVLLLALLWPGRAAAENCVCKGKSPCFCDSTKGSKGEKGFPGVPGPPGQ
RGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGVPGIPGFSGPPGLPGEPGTVGPPGLPGV
PGCNGTKGDQGFPGPPGRRGAPGLPGVAGIKGEKGTPAEGYSQEYGAKGDPGLPGMPGLQ
GAQGAQGYPGELGPQGPPGSLGMPGKPGPPGPKGLMGLKVIGAKGRKGDTGLTGPPGPPG
TVIVTLTGPDNMTDLKGEKGEKGSRGPPGPMGFTGPVGDSQSEKGDRGEPGAQGKPGKEG
APGPPGLPGQKGEQGKPGLAGRQGAKGMKGNPGPPGACGRMEYYDYVVGEKGDEGPPGPP
GPKGQRGMPGPQGPPGAAGRPGVSRPGLRGPPGFPGPKGAKGERGQTGLCRVGPPGLPGV
TGRPGSVGLPGPPGEPGRVTFGTGLPGLPGEPGCTGPPGPPGDTGMRGDDARVCTDCSYI
PGMPGLPGSPGPRGQDGMPGREGTTGPKGSPGSPGTPGLPGAQGPPGFRGDQGRKGSKGE
PRYVRPEGPKGEQGDPGARGEKGRTGSSGFLGRPGSKGSKGSKGEKGLAGSKGDRGLPGL
PGGLGLPGEMGLPGLAGYGPQGVRGFKGSKGIPGPPGLPGEAGMKGETSRATPLPALPGP
QGPHGLPGPPGVPGRVGVRGQPGDPGLSGPTGDTGFPGLGFPGNPGPKGDKGLAGGRGPP
GCEGKIGDPGRAGNLGQPGQKGEPGMVIPGEPGRMGSPGGHGSPGSKGEGGLPGLPGLPG
HPGHDGDDGLRGDRGSPGAPGDPGFPGKPAECLIGLPGLPGGQGATGPPGGRGLQGSKGN
LGAPGLSIPGIYGKPGEPGLIGLQGNMGLPGPKGQSGRPGISGLPGARGDPGVMGLLGIP
GPPGMVGRPGNPGIQGSPGFPGIKGRKGFLGEKGEPGDKGFPGPSETLVAIGDKGEQGLK
GVRGRMGVRGEKGDVGVQGPPGADGSEGMPGPPGAKGFMGLPGIPGGQGFPGAFGDKGDM
GIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGDPGPPGVLG
SKGEMGSEGLPGLTGVPGPHGIRGETGGAGIPGQYGPPGDAGAKGCQGRPGQQGVPGPPG
AVGVPGKPGLVGERGTQGQDGMPGPPGVKGEPGPPGRGIPGFPGIPGRRGIKGDMGLPGF
PGPPGVKGHQGDRGPIGPPGLVGLPGFQGTTGMAITGQKGNRGIPGAHGRPGAPGFPGLP
GLSTLSVKGSKGVRGADGIPGPRGPAGDIGPPGPKGIEGRSGYPGARGHPGFLGFPGVKG
EKGNQGPPGPQGAEGPRGPKGQQGPPGFSGKIFSIPGSKGPAGLPGIPGTPGDQGIQGIP
GLQGPKGVKGLPGRFGHPGHPGLPGPKGDRGFPGQRGEPGLIGFPGLQGLPGSPGTTIAG
PTRKGFIFTRHSQTTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFSTM
PFLFCSTNDVCSFASRNDYSYWLSTAVVMPPDMAPISGRALEPQISSSQPNNCSSCMSRW
LDVSLEGFFFCYVHKCRLRGFWPSIGISWVLSGRISGRPIHRVPWQGDMQLLHKFLQFLV
GIIKSKENVQETSATDFESRTTREYHQSLSGLHEETNLNGGHSSQNMKLIYYKELPNSEE
L
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgggggctgccccggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggagaactgtgtatgcaaaggtaaaagtccctgcttttgtgat
agcacaaaaggcagtaagggagaaaaaggctttcctggtgttccaggtccacctggtcaa
agaggctttcctggtccagaagggcctccagggccacagggaccaaagggttctccaggg
cttacaggcttagttggacccaaaggtatacgaggagtcccaggaatacctggattttca
ggtcctccaggccttcctggtgaaccaggaactgttggtcctcctggtctcccaggtgtt
ccaggatgcaatggcacaaagggtgaccaagggtttccaggtcctccaggtcgaagaggt
gctccaggcctcccaggagttgctggtatcaaaggagagaagggtacccctgctgaggga
tatagccaagagtatggtgcaaaaggtgatcctggattaccaggaatgcctggtctccag
ggtgcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggatct
ttaggcatgccagggaaaccaggacctcctggacctaagggtcttatgggactgaaagta
ataggagccaaaggaaggaagggtgacactgggttaactggaccccctgggcctccagga
actgttattgtgacgttaactggaccagacaacatgacggacttgaaaggagaaaaagga
gaaaaaggatcaagaggacccccaggaccaatggggtttacagggccagttggtgattct
caaagcgaaaagggtgaccgaggagaaccaggagcacaggggaagcctggaaaagaaggt
gccccaggtccacctggcttaccgggacaaaagggtgaacagggcaagccaggactggct
ggaaggcaaggagctaaggggatgaaaggaaaccctggtccgcctggagcgtgtggtcga
atggagtattacgattatgtggttggtgaaaaaggggatgaaggaccccctggacctcca
ggaccaaaaggtcaacgtggcatgcctgggccacagggtcctcctggagctgctggtagg
ccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctgggccaaaaggagca
aaaggagagagaggacaaactggcttgtgtagagtaggccctccaggactgcctggtgtt
actggcaggcctggttctgttggattgccaggtcctccaggagaaccaggtagagtaaca
tttggaactggcctgccaggacttcctggagagccagggtgtacaggacctccaggacct
ccaggagatactggcatgagaggtgatgatgctcgtgtgtgtactgattgtagctacatt
ccgggaatgcctggccttcctggttctcctgggcctcgtggtcaggatggcatgcctggt
agagaaggaacaacaggtccaaaaggttctccaggttctccaggaacaccagggcttcca
ggggctcaaggacctccaggtttcagaggagatcaaggacgtaaaggatcgaaaggtgaa
ccaagatatgtacgtccagaagggccaaaaggtgagcaaggagatcccggagccagggga
gaaaaaggaagaacaggttcaagtggatttctggggagacctggctctaaaggatccaaa
ggttctaaaggtgaaaagggattggctggatcaaaaggagatagaggactacctggattg
cctggtggacttggtcttcctggagaaatggggcttcctggtctggcaggttatggacca
caaggagtaagaggttttaaaggctctaaaggaatacctggaccacctggattacctgga
gaagcaggtatgaaaggagagaccagtagggcaactccattacctgctttgccaggacct
cagggaccacatggtttacctggacccccaggagtgcctggtagggttggagtaagaggt
cagccaggtgatccaggactttcaggaccaacgggtgacacaggctttccagggcttggg
tttcctgggaacccaggtccaaaaggagataaaggacttgcaggaggcagagggccacca
ggttgtgaaggaaagattggagatccaggccgagctggaaacctaggacaaccaggacaa
aagggtgagccaggcatggttattcctggagagccaggaagaatgggttcaccaggaggt
catggcagccctggctcaaaaggtgaaggtggacttccaggactcccaggcctaccaggg
catcctgggcatgatggtgatgatggcctaagaggagatcgtggctcacctggagctcct
ggagacccaggttttccagggaaacctgctgaatgtcttattggcctgccaggtttgcca
ggtggccagggagctacaggcccaccaggaggaagaggtttacaaggttcaaaaggaaac
ctgggtgctcctggtttgagtatcccaggaatctatggaaagcctggggaacctggatta
ataggtcttcagggaaatatgggattacctggtcccaagggacaatctggaaggccagga
atctctggtttgccaggtgcaaggggagatccaggagtaatgggactgttaggaattcct
ggacctcctggcatggttggaagaccaggaaaccctggtatccaaggttctcctggcttt
ccaggaataaagggaagaaaaggatttcttggagaaaaaggtgaaccaggtgataaaggt
tttcctggaccatctgagaccttggttgctattggggacaaaggagaacaaggtttaaaa
ggagttcgaggccgaatgggggtaaggggagaaaaaggagatgttggtgtgcaaggtcca
ccaggtgctgatgggtctgaaggaatgcctggtccaccaggagccaaaggatttatgggt
cttccagggattcctggaggacaaggattcccaggtgcatttggagacaagggggacatg
ggaattccaggtccaaaaggtcagaaaggatctccaggctttccaggaccatcaggtgac
cctggtccaccaggctatggtggctttccaggtgacaaaggagatcctgggtacccatct
gctgggcctccaggagaacctggtccaaagggagatccaggtcccccaggagttttgggc
agcaaaggagaaatgggctctgagggtcttccagggcttacaggagtaccaggaccacat
gggatcagaggagaaacaggaggtgcaggaatcccagggcagtatggaccccctggagat
gctggtgctaaaggatgccagggccgcccaggacagcagggagtcccaggccctcctggt
gctgttggagtccctggaaaacctggacttgttggtgaaaggggtactcaaggtcaggat
ggtatgcctggccccccaggagtaaagggagaaccagggccaccagggagagggattcct
ggttttccaggtattcctggacgtagaggaatcaaaggggacatgggactgcctggcttt
cctgggcctccaggtgtgaaaggtcatcagggagatcgaggacccattggacctcctggc
ttagtggggttacctggatttcaaggcaccacaggcatggcaatcactggccagaaaggg
aacagaggtattcctggtgcacatggaagaccaggtgctcctggttttccaggccttcct
ggcctttccactctcagcgtgaaaggaagcaaaggtgtccgaggggcggatggaattcca
gggccaaggggcccagctggtgacattggccctcctggtcccaagggaatagaaggccga
tcaggctatcctggtgctagagggcaccctggatttcttggattcccaggtgtaaaagga
gaaaagggtaatcaaggacccccaggaccacaaggtgcagaagggccaaggggaccaaag
ggccagcaaggcccacctggattctctggaaaaatattctccatcccaggaagcaaaggt
cctgcaggactaccaggaatcccaggaaccccaggtgatcaaggaattcaagggattcct
ggactacaaggacccaaaggagtaaaaggtctaccaggacgttttggtcatccaggacat
ccaggattgcctggtccaaaaggagacaggggatttccaggacaaagaggagaacctgga
ttgattggctttccaggtctgcaggggttacctggatcaccaggtactaccattgctggt
ccaacaagaaaaggatttatctttacccgtcatagtcagacaacaaagattccttcgtgc
ccacatgggacatcccagatctatgttggctattcactgctctttgtacaaggaaatgaa
cgagcacatggacaagatcttggaacagctggtagctgcttgcagaggttcagcaccatg
ccattcttgttctgcagcaccaatgatgtttgtagctttgcttcccgcaatgactactcc
tactggctgtccactgcagtggtgatgccaccagacatggcacccatttctggcagggca
ctagagccccagataagcagttcacagccaaacaactgtagttcctgcatgtccagatgg
ctggatgtctctctggaagggtttttcttttgttatgtacacaagtgccggctcagaggc
ttctggccaagcattggcatctcctgggtcttgtctggaagaatttcgggccgtcccatt
catagagtgccatggcagggggacatgcaactactacacaaattcctacagtttctggtt
ggcatcattaaatccaaggagaatgttcaggagaccagtgccacagactttgaaagcagg
acaactagagaatatcatcagtcgttgtcaggtctgcatgaagagaccaatctaaatggt
ggccactcctcacagaacatgaaactgatttattacaaagaattgcctaactctgaagag
ctataa
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integrated database retrieval system
