Passer montanus (Eurasian tree sparrow): 120508635
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Entry
120508635 CDS
T07277
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120508635 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoa04121
]
120508635 (TRIP12)
Enzymes [BR:
pmoa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120508635 (TRIP12)
Ubiquitin system [BR:
pmoa04121
]
Ubiquitin ligases (E3)
HECT type E3
120508635 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
120508635
NCBI-ProteinID:
XP_039578360
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSNRPSNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFPKRGCSSSAVLIPQQEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSSETNKPHTKSKRRHSDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIESGSSVESTGTEEKSAKVSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEPSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEPPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLASTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVEHYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEIYLISTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctagtaacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaag
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacactttcctaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagagagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcccagctctgctaaaaaacccaaagcacttcaacacactgaa
acttcctcagaaactaacaagccacatactaaatctaagagaagacactcagaccaagag
cagcccaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtatagagagt
gggtcatcagttgaatcaactggcactgaagaaaagtcagcaaaagtctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttccacctcctcctcctcctctgctgttgcctctgcttcttctactgttcctcagggt
gccagagtgaaacagggaaaggaccagagtaaggctagacgttcccgttctgcatccagc
cccagtccaagaaggagtagcagggacaaagaaccaagtaaaacaggtggctcttcaaag
tttgactgggctgctcgatttagcccaaaagtcagtctccctaaaacaaaactgtctcta
ccaggctcttccaagtcggagacatcaaaacctggaccttcaggactacaggctaagcta
gcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttacggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggagttaattcttcagctgcacggacagatgagcctccccaggga
gctgcagcttctagttctgttgctggagctgtaggtatgacaacttctggagaaagtgag
tcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttccaaagctcaacagcttttacaaggtctccaagctactgatgaaagtcag
caactacaggcagtgattgagatgtgccagctgttggttatgggaaatgaagaaacatta
ggaggatttccagtcaagagtgttgtaccagctttgataacgctgctgcagatggagcac
aactttgacattatgaatcatgcatgtcgggccttaacatacatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttatc
cagtgcattgatgtggcagagcaggcgcttacagccctggagatgctgtcacgcaggcac
agtaaagccattctgcaggcaggtgggttggcagactgtttgctgtatctggaattcttc
agtataaatgcacaaaggaatgcactagctatcgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgctaacacaaaggttaacccat
caggacaaaaagtctgttgaaagcacctgtctgtgttttgcacggctagtggacaatttc
cagcatgaagagaacttgctgcagcaggttgcttccaaggacttgctaacaaacatccag
cagctcttggtcgtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttctccctgatgtgctccaactgccccacacttgcagtccagcttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgtggagcctcaaatgggagctgtcaagaacaa
attgaccttgttccacgaagtcctcaagaactttatgaacttacttctcttatctgtgaa
ctgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgag
ataagcctgtctacgcttgggcgtgtctatactattgattttaactctatgcagcaaatc
aatgaggatactggaacagctcgtgccattcagcgaaaaccaaaccctttagccagtaca
aacactagtggacattcagaattgaagaaggatgatgctcgagcacagttaatgaaagag
gacccagaactggcaaaatcctttatcaaaacattgtttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtgttgaaaaatcatgctgtttcaagtcat
attgcctccatgctgtcgagtcaagaccttaagatagtagttggagccctacagatggca
gagattttaatgcagaagttacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaaaaacttggcagagtctgaggctttgctgacaagccccccaaaagtc
tgcactaatggatcaggaacgctgggaaccactacgaccataagcactgggacagccact
gctgccagcaacgcagctgcagatttgggctctcccagcttgcagcacagccgggaggat
tccttggatctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgcca
aaacgagggccaaggagaccaaaatactcccctccaagagatgatgacaaagtagacaat
caagctaaaagccctacaactacacagtctcctaaatcatctttcttggcaagtttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaataatattgaaccagcaaga
acagcaggagtaagtggtctggcaagggctgcttccaaggataccatttccaataacaga
gaaaaaattaagggctggattaaggagcaagcccataaatttgtagaacattactttagt
tctgaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggaatctgacgtctcctcatttgaaatccagcatagtgggtttgttaaacaa
ctgctgctctatttgacatctaaaagtgaaaaagatgctgttagcagggatatcagattg
aaaagatttcttcatgtatttttttcttctccacttcctggagaagagccccttggaaga
ttagagccattagaaaacgcacctttgttggcattagtccataaaatgaacaactgcctc
agtcagatggaacagtttcctgttaaagtgcatgacttccctagtggaaatggaacaggg
agcagtttttctcttaacagaggatcccaagctttaaaattcttcaatacacatcaatta
aaatgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggacct
gtgaagattgatcctctggctttggtacaagccattgaaagataccttgtagttagaggc
tatggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagattgcagttt
tacattggagatcacttgctgccatacaatatgactgtgtaccaagcagtgaggcagtac
agtttacaagctgaggaagagagggagtccacagatgatgaaagcaacccactgggaaga
gctgggatttggacaaaaacgcacaccatttggtacaaacctgtgcgagaggatgaagat
ggtaataaggactgtgttgggggtaaaagaggaagagcacaaactgctcccacaaaaacc
tcccctagaaattctaaaaaacatgatgagttgtggcatgatggtgtatgcccttcggtg
ttaaatcctctggaaatttacctcatatctactccacctgaaaatataacatttgaagac
ccctcattagatgttattcttcttttgagagtgctacatgctatcagtcgatactggtat
tacttgtatgataatgcagtctgcaaggagataattccaacctcagagtttatcaacagt
aaactgacagcaaaggcaaacaggcagcttcaggatcctttggtaattatgacaggaaac
atcccgacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacc
cgccaaatgctgttttatgtaacggcctttgatcgtgatcgagccatgcagaggctactg
gacactaatccagaaatcaatcagtcggattctcaggatagcagagtggcaccacggctg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcaca
ggtctaggccctacactagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctttggaggggagaagaagtgactttagccaatccaaaaggaagccaggagggt
accaagtacattcataaccttcaaggcctttttgcacttccttttggtagaacagccaag
ccagctcacattgcaaaagtcaaaatgaagttccgctttctgggaaaactaatggccaag
gcaatcatggacttcagactggtggatcttcctcttggacttcctttttataagtggatg
ctacgacaggaaacttccttgacatcacatgacttgttcagtattgatccagtagtagcc
aaatcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaagataaa
actcagaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctca
gtggaagatctggggctggacttcacacttcctgggtttcccaacatagagctgaaaaag
gggggaaaagatacaccggtcactatccacaatttagaggagtatctcagattggttata
ttctgggcactaaatgaaggtgtggccagacagtttgactccttcagagatggatttgag
tcggtgttcccccttagtcatcttcagtacttctatcctgaggagttggagcagctcttg
tgtggcagcaagacagacacttgggatgcaaagactttaatggaatgttgcaggcctgat
cacggttatacgcacgacagtcgagcagtgaagtatctctttgaaattctcagtagtttt
gatagtgagcagcaaagactgtttcttcagtttgtgacaggcagccccagactgcctgta
ggaggttttcgaagtttgaatcctcccctgacgattgtacggaagacatttgagtccaca
gagaatcccgatgatttcttaccctcagtaatgacctgtgtgaactatctcaaattgccg
gactattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
