Passer montanus (Eurasian tree sparrow): 120508745
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Entry
120508745 CDS
T07277
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120508745 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmoa01009
]
120508745 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmoa04515
]
120508745 (PCDH11X)
Protein phosphatases and associated proteins [BR:
pmoa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120508745 (PCDH11X)
Cell adhesion molecules [BR:
pmoa04515
]
Cadherins
Protocadherins
120508745 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Motif
Other DBs
NCBI-GeneID:
120508745
NCBI-ProteinID:
XP_039578560
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
SASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILG
HSDNCWMPPALTQFQQPNTSLPSFGFQQGWGRGARPEGRHTLGRPPKDDSDKGQAGPRPQ
FYNTCERHCAGEDPVKVIPLANFAASHPAPGAGSSTTFIHEHQL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcctgttggcctgcatcgtgttccaa
tctggcgcgcaggagaagaattacaccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatctgctcaaggatctcaacctaacgctggaccctgacgtgcccctgtcctccccg
ctgcagttcaagctggtctacaagaccggggacgtgcccctggtgagggtggaggagaac
accggggagatcttcacggctgccaaccgcatcgaccgcgagaagctgtgcgccggcatc
ttcagcgagaaccgctgcttctacgaggtggaggtggctgtgctgcccgacgaggtgttc
aggctggtcaagatcagattcctgatcgaggatataaatgacaacgccccccttttcccc
tcgacagttattaacatctctatcccggagaacacggccattaattcccgctactctgtc
ccgtctgccatcgacccggacatcggcgtgaacggaatccagcattatgagctcctcaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgaccagggtcaaaatgtg
tttggtcttgacataactgagacacctgagggagataagtggcctcaactgattgtccag
cagatcctggatagggagcagaaggacacctatgtgatgaaaatcaaagttgaagatggt
gggagccccccgaggtccagcactgccatcctgcaggtgacggtgaccgatgtcaacgac
aaccgcccggtcttcaaggagaacgacatcgaggtcagcgtgcccgaaaatgcccccgtg
ggcacctccgtgtcccagctccacgccaccgacgcagacctgggctccaatgcacaaatc
cacttctacttcagcaaccagatctccagcctggccaaaaggctctttgccatcgacaac
accactggcctcatcaccatcagggagccgctggacagggaggagtcccctgtgcacaag
ctgactgttctggcgagcgatggcagctccactccctcaagagcaacggtgactgttaat
gtcacagatattaatgacaatgtcccgtcaatagacaccaggtacatcatcaaccccgtg
aatggaacagtgcttttgtctgagaaggctccccttaatacaaaaattgccttgataaca
gtgatggacaaggatgctgatcagaatgggaaagttacctgttttacagaccatgatgtt
cctttcaggctaaaaccagtgtttgataatcagtttctcctggagacagccacgtttcta
gactatgaagctacacgggaatacgccatcaaaatagtggcttcagattcagggaagcct
cccttaaatcagtctgcaatgctcctgatcaaaattaaagatgaaaacgacaacgcccca
gttttcacacagcctatcatcggcctttccatccctgaaaacaacgctcctggtactcag
ctgaccaagatcagtgctacagatgctgacagcgggcggaatgccgagatcagctacatc
ctgggctccgatgcacccccaattttcaacctggaccgccgcacaggcatcctgacagca
gtgagaaagctggacagagaaaagcaggacaggtactctttcactgtgctggctaaggat
aatgggatgccacctttgcagaccaatgctaccgtgacggtgtcagtgctggaccagaat
gataacagccctgctttcacacataatgaatataatttctatgtgccagaaaacctgccc
atgtatggcacagtggggcttatcacagttacggatgctgatgcgggagacaacgctgca
gtcactctctctatcttaaatggtagagataatttcattatagatccactcactggtgta
ataaggcctaatattacctttgatagggagcagcaggggtcgtacactttccaggtgaaa
gcggtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgataacaggcccgtttttgttattccctcatctaattattcctatgagttg
gtcccaacgtcagccagcccggggtctgtagtcactaaagtctttgcagtcgataatgac
acgggaatgaacgcagagctccgctatagcatcataggtgggaactccaggggcttgttt
accattgaccaattaacaggcaatatcactttgaaagagaaggtaattacatcagaccat
ggcttgcacagactggtgatcaaggtgaatgacctgggacagccggagtctctttacacc
atagctcttgtgcacttgtttgtgaacgagacggtcaccaacagctcctacgtgcaagag
ctggtgcgtaggaatatggaaactccagttggccagaacattggggatggtgagataacc
ccacagaccaatgattacgtcaagatcatcattgccattattgcaggcaccatgacagtt
attctggtaatttttgttaccgctttagtccggtgccgccagacgcccaggcacaaggtt
gtccaaaaaaataagcagagtggtgaatgggtttcccccaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctctccaaagagtctcctcctcaactttgtgact
attgaagaatctaagcctgatgatcctggccacgagcacataaatggcactttagacatt
cctgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaaacctgatagcccagacttagcaaagcactacaagtctgcttctccgcagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaattg
cctctagataacacctttgtggtgggctgtgactcactttccaagtgctcatccagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcacacaaaagaagtgggaaggccacaaactcctttgaaagaaacc
accttggagccctggactcagccacagccccagcgccgtgtcaccttccacctgccagat
ggctcccaggaaagctgcagtgacagcgggctcggagaccacgagcccacgagcggggcc
agcgcgtcccacccgctgcccctgggcttcccccaggacgagttctacgagcaggcgtcc
cccaacagccgcacggagggagacggcaactccgaccccgagtccactatcgaagtgaac
ctgcagaaagctctggccgaagcctctgagaactgcacgcaggagtgcctcatcctcggc
cactccgacaactgctggatgccaccggccctgacgcagttccagcagcccaacacctcc
ttgccatcgtttggcttccagcaaggctggggccggggagccagacccgagggacgccac
actctcgggaggccgccaaaggacgacagtgacaaaggccaggcagggcccaggccccag
ttctacaacacctgcgaaagacattgcgccggcgaggatcccgtcaaggtcatccccctg
gcaaacttcgccgcgtcccacccggcgccgggggctggcagcagcaccacgtttatacac
gagcaccagctgtaa
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