Passer montanus (Eurasian tree sparrow): 120508833 Help Entry 120508833         CDS       T07277                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism pmoa  Passer montanus (Eurasian tree sparrow) Brite KEGG Orthology (KO) [BR:pmoa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pmoa03400]     120508833 (SPG11) DNA repair and recombination proteins [BR:pmoa03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      120508833 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  120508833 NCBI-ProteinID:  XP_039578717 LinkDB All DBs Position Unknown AA seq 2373 aa AA seqDB search MAAAGARPELRVLLVPRSGQPRDEARVRLSRARHALGALLPAGAIRLESLGPGGAARARG SVLPGAWADFAWDSSEDDGSQSCKTKLLALAQSHDLFVYEFNVEDGKHNPNSLHSCEAET LKKLLEAKNITLPSISSVKILSFGNNKCKLLLNQSVLVHLTFPGEGSPPETCGCFPLALP PGAVGRIADSQFCRGILFLLDSAGWIYILDCCDGATLGKVAVALGAAPGPVSPLAALAVS PDLSTAVVTSSCQRALAVQLNTYFRQFPEHLLCRRDPESLPVKPPEGLDEDELASSEHSM ELLAAPFRTDRSWKAHLSSLWDRVRRRRTPGSPGLVHDLNLPWYQFLTHLEDHDPEVCED PERMVAFVPRAVTWAASPALQGQPGGTGQQWAQIPVGAARELVKLECRLVTAAKAVFVLQ AQDTGLSLALWDFESQHVTCSHFGRGSVYVESSAELPLCLLLTERGLSLVLFGVTQEEFL TRLMMFGSAAVVDSLCHLNGWERCSIPIHALEAGLENRQLDTVDLFLKSKESGFSLSAGC PGPEHPGGAASQSYLRNLEELRPALNLLCSAIQDNDMEPHSKPFSEQLLNLTLTFLTKQL EEIFVHTEEPDEFLQKAADILTDYIIRLRKFLRRYPHPVVTPEHTGAELDEDLPEIEESQ KWEKLTPEEVIAEAILSNKIPEAQIFFRRQQHPAESLQEFMQTALSLVYDCLLRGSPREA SELLRNMGLDVKQELHKICLHTQDRRVRELLVKVLQEENYFSEKEKKIIDFVHQVERFYS ESFQEKQETQSLSRCSRWRRQQELEGPRAVLGSQLGWGSPGAPRLTVTLSWALCWDPLLQ EMLLLPWKPRQELKTCSAEVLWMHLTAQHDWLSICSWIEEAEPSQAPCDRAAWPPLSPDI VDRSTLCSPYMRQDILNKLARKGIFVPSELEDFELLLQRLWCLGGVLQNPHPVPKYSTAS GLDFHAQFVLHCLEHSLQYLLYTYLDYYSLTPSNCPVLDDKELQEAHPWFEFLVQCRGVA SNPRDPKMVFQASLANAQMLIPSSQGGVSSILLEGRTLLALATTVYGPGGIDQVLQNEDT EKPLKKVDPQLLKMALTPYPKLKAALFPPCTAHGILPPDISLYHLLQSLMPFDPTKLFGW QSANTLAVSDAWSELPHFSSPGLVSRHGVQESLDFLFYLLHGRPAFAFGTFVGQQLARSK APRQLIQQAAREAQLLALSCLGVPSVAAACVCFLELLGQDSLGLRVELRAASLLCSHGTC RDSLVEKLTKLADGEKAAAAALLTSLEEAFWDAIEQQGIKRTSSDCRRQWSLVMQFCKLH GLQLSTSFLRECARSNEWLQFLIQTQLHGHQPAQVLALLQEFPAVLQDHLQLALGRLLPA EAGAAGRARAGSLFHTLLQCQGQPSPCWFLLAEGLRAHSPILSVLAACCPDANLISCLCV WIITSVDGATRAEATAHTRAESPQWDLQDLAVIWKVFLRKKKSKTLLNGFQLFLKDSPLL HILEMYELCMNCKKYNEAKTKLEKFQESLTNLGAAGGAAPEVPLPWLRSQALFLLELMLQ QCHTDYELGRLLQLLAAAESLLLDGPHLRRLCALSEALRGSSISISRSILTCCSLEAFQR ECSSILEQLQDKGMFSLAREVAALAQLPVDSVVTHEVLRDLQHLRDSGQWHQSQTRADFW KKCNDTFSRHSICSRAAAAFFLQQADSAWDCCGPGTASSTLERQLLLTLAGHWLAQQPEV PVQELQELEKQIWLCRVAERALLPAGSAPCPAALCFSRLAQQLSFARLPALEAAGQGGLA QQLSCARLPAQEPALTAAERAALGALLGALLDQGGVHEAARVCHYFQLWQRDVALVLLCR ALALGEAGLEQPEVRALLSEAGAAPAPSSLEDWTPLGGEDDAVVAALKALAEECVHGRGY CRQVLCLYELSKELGCSFGEVAAREPREVLGAILARRGPERGRRAQAFIACQGLPPDTVA PLLAQQITQELLASAQGRGQKQASNPAVESQELLQLAKLCQDHTLVGMKLLDKISSVPRG ELSCITELLILAHSCFSLTCHMEGITRVLQAARLLTEEHLAPREEYGLLVRLLTGIGRYN EMTYIFELLHQKHYFEVLMRKNLDPSGTLKAALLDYTKRCRPGDSEKHNMIALCFSMCRE IGQNHEAAACTQLKLIDCRPWEESLQDVPNLKKLLLKAVTLFIDAAESYSKDSCVRQALR CRRQTRLITLQLHFLGSGQSTRIINLGRQDLPGAILALPRFYQAAIVAEAYEFLPDWAEV LFQQVITRGDFVYLEEFRQQRPLRPGLFEEVAKKVKQHPPADAALRNLKRFLTHCEDIYT YYRLAYDHKFYDVVNSLLKDPQTGCCLNDLLAN NT seq 7122 nt NT seq  +upstreamnt  +downstreamnt atggcggcggccggggcccggccggagctgcgggtgctgctggtgccccgctcgggacag ccgcgggacgaggcgcgggtgcggctcagcagagcccggcacgccctgggcgccctgctg ccggccggcgccatccgcctggagtcgctggggccgggcggggccgcgcgggcccggggc agcgtcctgccgggagcctgggccgacttcgcctgggacagctcagaagatgatggttca caatcctgcaagacaaagctgctggctcttgctcaaagccatgacctgtttgtctatgaa ttcaatgtagaagatggaaaacacaacccaaattctctgcacagttgtgaggcagagacg cttaaaaagctccttgaagctaaaaacataactctgccttccatttcctctgtgaagatc ctgtcttttggaaacaacaagtgcaaactgctgctcaaccagtctgtccttgtgcacctg acctttcctggggaaggctcacccccagagacctgtggctgcttccccctggctctgcct ccaggagctgtgggcagaattgcagactcccagttctgcagggggatcctgttcctgttg gacagtgctggctggatttacatacttgactgctgtgatggagccaccctggggaaggtg gctgtagccctgggagctgccccgggccctgtgtcccccctggctgccctggcagtgtcc cctgacctcagcacagccgtggtgaccagcagctgccagcgtgccctggctgtgcagctc aacacctacttcagacagttccctgaacatttgctctgtaggagagatcctgaaagtctc ccagtgaagcctccagagggcctggacgaggatgagctggccagctctgagcacagcatg gagctgctggcagcccctttccgcacagacaggtcctggaaggcacacctgtcctcactg tgggacagagtgaggagaaggagaacaccaggctctccaggtttggtgcacgacttgaat ttgccttggtatcagtttttgacccatcttgaagaccacgatcctgaagtctgtgaggat ccagagaggatggtggcctttgtcccccgggctgtcacgtgggcagcttccccagccctg caaggccagcctgggggtacaggacagcagtgggcacaaatccccgtgggagctgcccgg gagctggtgaagctggagtgcagactggtgactgcagcgaaggctgtgtttgtgctgcag gcacaggacacggggctgtctctggccctctgggattttgagtcccagcacgtgacgtgt tcccactttggcagaggcagtgtctacgtggagagcagtgcagagctgcccctgtgtctg ctgctgacagagcgtggtctgtccctggtcctgtttggggtcacccaggaggagttcctg accaggctgatgatgtttggcagcgctgcagtcgtggattccctgtgtcacctcaacggg tgggagaggtgctccattcccatccatgccctcgaggcaggtttggagaatcgccagctg gacacggtggacctgtttttaaaaagcaaagaaagtggtttcagtctgtctgcaggctgc cctgggcctgagcaccctgggggtgctgcctcccagtcctacctgagaaatttggaggag ctcaggccagctctaaacttgctctgctcagcaatccaagacaatgacatggagcctcac agcaagcccttctctgagcagctcctgaacctcaccctgactttcctcaccaagcagctg gaggaaatctttgtgcacacagaggaacctgatgagttcctgcagaaggctgcagatatt ttaactgattacatcatcagactgaggaagttcctgaggaggtaccctcacccagtggtg accccagagcacacaggagctgagctggatgaggacctgcctgagatagaagagagccaa aaatgggaaaaactgacaccagaggaggtcattgctgaggccatcctaagcaacaaaata ccagaggcccagatcttcttcaggaggcagcagcatcctgctgagagcctgcaggagttc atgcagacagctctgagcctggtctatgactgcctgctgaggggcagccccagggaggcc tccgagctgctcaggaacatgggcttggacgtgaagcaggagctgcacaagatctgcctg cacacacaggacaggcgcgtcagggagctcctggtgaaagtcttacaagaagaaaattat ttttctgaaaaagagaagaaaattatagactttgtgcatcaggttgaaagattctactcg gaatccttccaggaaaagcaagagactcagtctctttccaggtgcagccgctggaggagg cagcaggagctggaggggccccgggcagtgctgggctcccagctgggctggggcagcccc ggggccccccggctcacagtgaccctcagctgggctctctgctgggacccgctgctgcag gagatgctgctgctgccctggaaaccacggcaagaactcaagacgtgcagtgctgaggtg ctctggatgcacctgacagcccagcatgactggctgagcatttgttcctggattgaggag gcagagcccagccaggctccgtgtgacagagctgcctggccccccctgagccctgacatc gtggacaggagcactctgtgcagcccctacatgagacaggacatcctcaacaagctggcc agaaaggggatttttgtcccttctgagctggaagattttgagctgctgctccagaggttg tggtgcctggggggagtcctgcagaatcctcacccagttccaaagtacagcactgccagt ggcctggacttccatgctcagtttgtcctccactgcctggagcacagcctgcagtacctg ctgtacacctacctggactattacagtttaaccccttcaaactgccctgtcctggatgac aaggagctgcaggaagcacacccctggtttgagttcctggtgcagtgcagaggggttgcc agcaatccccgagatcccaagatggttttccaggccagtctggccaacgctcagatgctg attcccagcagccaagggggtgtgagcagcatcctgctggagggcaggaccctgctggcc ctggccaccacggtctatgggcctgggggcattgaccaggtccttcagaacgaagacaca gaaaaacctctcaagaaagttgatccacagctcttgaagatggccttgaccccttacccc aagctcaaggctgctctctttcccccctgcactgctcatgggattttgccccctgacatc tctctctaccacctgctgcagtcattaatgccctttgatcccacgaaattgtttggctgg cagtcagcaaacactcttgctgtgtcagatgcctggagcgagctgccccacttctccagc ccggggctggtgagcaggcacggcgtgcaggagagcctggatttcctgttctacctgctg cacggccgccccgccttcgccttcggcaccttcgtggggcagcagctggcccggagcaaa gccccccggcagctgatccagcaggcagctcgggaggcccagctgctggccctgagctgc ctgggggtcccctcggtggctgcagcctgcgtgtgcttcctggagctgctggggcaggac agcctggggctgcgcgtggagctcagggctgccagcctgctctgcagccacggcacctgc agggactccctggttgagaagctaacaaagctggctgatggtgaaaaggcagcagcagca gcacttctgacctccttggaagaggccttctgggatgccattgagcagcagggcataaag aggacgtccagtgactgcaggaggcagtggtccttggtcatgcagttctgcaagctgcat ggcctgcagctgagcacgtccttcctgagggaatgtgccagatccaacgagtggctgcag ttcctgatccagacccagctccacggccaccagccagcccaggtccttgccctgctgcag gagttccctgccgtgctgcaggatcacctgcagctggccctgggcaggctgctgcctgct gaggcgggtgctgctggcagggcccgtgcagggagcctgttccacacgctgctgcagtgc cagggccagcccagcccctgctggttcctgctggctgaagggctccgggcacacagcccc atcctcagcgtgctggcagcctgctgccccgacgccaacctcatctcctgcctctgtgtt tggatcatcacttctgtggatggtgccaccagggctgaggccactgcccacacccgggca gagagtccccagtgggacctgcaggaccttgctgtcatctggaaagtcttcttgaggaag aagaagagtaaaacacttctgaatggcttccagctcttcttaaaggattcccctttgctg cacatcctggagatgtatgagctgtgcatgaactgtaagaagtacaacgaagctaaaacc aaactggagaaatttcaggaaagcctcacaaatctgggggctgcagggggagcagccccc gaggtgccgctgccgtggctgcgctcgcaggcgctcttcctcctggagctgatgctgcag cagtgccacactgactacgagctgggcaggctcctgcagctcctggctgcagcagagagc ctgctgctggacggcccccacctgaggaggctctgtgccctcagtgaggccctgaggggc tcctccatctccatcagccgctccatcctcacctgctgcagcctggaggccttccagagg gagtgcagctccatcctggagcagctgcaggacaagggcatgttcagcctggctcgggag gtggcagccctggctcagctgcccgtggacagcgtggtcacacacgaggttctgagggat ctacaacatttaagagactctggacagtggcatcagagccagacacgagctgacttctgg aagaagtgcaacgacaccttcagcagacattccatctgcagccgggccgcagcggcgttc ttcctgcagcaggccgacagcgcctgggactgctgcgggccgggcacggcgagcagcacc ctggagaggcagctgctgctcaccctggctggccactggctggcccagcagcccgaggtg cccgtgcaggagctgcaggagctggaaaagcagatctggctgtgccgcgtggccgagcga gcgctgctgcccgcgggctcggcgccgtgccccgcggccctgtgcttcagcaggctggcc cagcagctgtccttcgccaggctgccagccctggaggcggccgggcagggcgggctggcc cagcagctgtcctgtgccaggctgccagcccaggagccggcactgacggccgcggagcgc gcggcgctgggcgcgctgctcggggccctgctggaccagggcggcgtgcacgaggctgcc cgagtgtgccactacttccagctgtggcagcgggacgtggcgctggtgctgctgtgcaga gccctggccttgggcgaggccgggctggagcagcccgaggtgcgggccctgctgagcgag gccggcgcagcccccgccccatccagcctggaggactggacccctctggggggtgaggat gatgctgtggtggcagcgctgaaggccctggcagaggaatgtgtccatggcaggggctac tgcaggcaggtgctgtgcctctacgagctctccaaggaactgggctgctccttcggggag gtggcggcgcgggagccgcgggaggtgctgggggccatcctggcgcggcggggccccgag cgcggccgcagggcccaggccttcatcgcctgccaggggctgccccctgacaccgtggca ccgctgctggcacagcagatcacccaggagctgctggcctcggcacagggaagagggcag aagcaggcttcgaaccctgcagtggagagccaggagctgctgcagcttgccaagctgtgc caggatcacaccttggttgggatgaagttgctggataaaatctcctctgtgccccgtggg gagctgtcgtgcattacagagctgctgatcctggcccacagctgcttcagcctgacgtgc cacatggaggggatcacacgagtgctgcaggcagctcggctgctcaccgaggagcacctg gccccccgcgaggagtacgggctgctggtgcgcctgctgacgggcattggcaggtacaat gagatgacctacatcttcgagctgctgcaccagaaacactacttcgaggtgctcatgagg aagaacctggacccgagcgggacgctgaaggcggcgctgctggactacaccaagcgctgc cggcccggcgacagcgagaagcacaacatgatcgcgctgtgcttcagcatgtgcagggag atcggccagaaccacgaggctgccgcctgcacccagctcaaactcatcgactgccggccc tgggaggagtctcttcaggatgttccaaatttaaagaagctgctgctgaaagctgtgact ctcttcattgatgcagcagaaagttactccaaggactcgtgtgtgcggcaggcgctgcgc tgccgccgccagacgcggctcatcacgctccagctgcacttcctgggctcgggccagagc accaggatcatcaacctgggcaggcaggacctgccaggagccatcctggccttgccccgc ttctaccaggcagccatcgtggccgaggcctacgagttcctgccggactgggctgaggtt ctgttccagcaggtgatcaccaggggggactttgtgtacctggaggagttccggcagcag cggccgctgcggcccggcctgttcgaggaggtggccaagaaggtcaaacagcacccgcct gctgatgctgccctgaggaacctgaagcggttcctcacccactgtgaggacatctacacc tactacaggctggcctacgaccacaagttctatgacgtggtgaactcgctgctgaaggac cctcagactggctgctgcctcaacgacctcctagccaactga

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