Passer montanus (Eurasian tree sparrow): 120509102
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Entry
120509102 CDS
T07277
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04140
Autophagy - animal
pmoa04148
Efferocytosis
pmoa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120509102 (VPS16)
04148 Efferocytosis
120509102 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120509102 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoa04131
]
120509102 (VPS16)
Membrane trafficking [BR:
pmoa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120509102 (VPS16)
Hops complex
120509102 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
120509102
NCBI-ProteinID:
XP_039579319
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MDCYTANWNPLGEETFYRKLELYSMEWGLREDLRDCVLAAAPYGGPIALLRNSRRDKTPS
ARPLLEIYSASGLLLASVPWKSGHLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSM
GNEVLQNHVLEAQVFHTEFGTGVAILTGALRFSLATNIDDLKLRRLPEVPGLQKPPPCWT
VLAQDRVTMVLLAMGQELFLLDNTSCSVLTPPGLSPSAGPFLRLAVSFTQRHLALFCDCG
TVWMGAASLREKFCEFNTGIRSPPKQMVWCTRPRSRQRAVVLAWERQLMVVGNASECIRF
VLDEDSYLVPELDGVRILSRSSHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQ
KADEYLREIREQQLLPEAVGQCIEAAGYEHEPDTQKSLLRAASFGKCFLDKFPPEGFVRM
CQDLRVLNAIRDYQIGIPLTFTQYKQLTIEVLLDRLVLRRLYPLAIRICEFLRLPEMQGV
SRILAHWACYKVQQKDKSDEEVAQAINQKLGDTAGISYSDIATRAYDCGRAELAIKLLEY
EPRSGEQVPLLLKMKRSKLALGKAIESGDTDLVYTVVLHLKNELNRGSFFMTLQNQPVAL
SLYRQFCRHQERETLKDLYNQDDNHQELGNLHVLGGYCQKRIEGRVAALQNALDEFYKAK
NDFAAKATEEQIKLLRLQRHLQEELDKPYLDLSLHDTVATLILDGHHKRAEQLYRDFRIP
DKRYWWLKINALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPE
QRVKAFVLVGDLEQAAEAAMERRSEAEMSLVLARCCPGTDGALAERLGRARAQLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggaacccgctgggcgaggagaccttctaccggaagctg
gagctctactccatggagtgggggctgcgggaggacctgcgtgactgtgtgctggcagct
gccccctatgggggtcccatagctctgctgaggaattcccggcgggacaagacccccagc
gcccgcccgctcctggagatctactcggcctcggggctgctcctggccagtgtcccgtgg
aagagcggccacctggtgcacctgggctggacagcgggggaggacctgctgtgcatccag
gaggatgggactgtcctggtctacaacctgttctgcgagttcaagaggcacttcagcatg
ggaaacgaggtgctgcagaaccacgtgctggaggcgcaggttttccacacggagttcggg
acgggcgtggccatcctgacgggagcgctgcgcttctccctggccaccaacatcgacgac
ctcaagctgcgccgcctgcccgaggtccctgggctgcagaagcccccgccgtgctggacc
gtgctggcccaggacagggtgaccatggtgctgctggccatggggcaggagctcttcctg
ctggacaacacctcctgctccgtgctgacgccccccgggctgagcccctcggcggggccg
ttcctgcgcctggccgtgtccttcacgcagcggcacctggcgctcttctgcgactgcggc
accgtctggatgggagcggcctcgctcagggagaagttctgcgagttcaacaccggcatc
cgatccccgcccaagcagatggtctggtgcacgcggccccgcagccggcagcgagccgtg
gtgctggcctgggagcggcagctgatggtggtgggcaacgcctcggagtgcatccgcttt
gtcctggatgaggattcctacctggtgcccgagctggacggggtccggatcctgtcccgc
agctcccacgagttcctgcacgagatcccagaggccagccaggagattttccgcatcgcc
tccatggctccgggcgctctgctgctggaggcacagaaggagtacgagaaggagagccag
aaggccgacgagtacctgcgggagatccgggagcagcagctgctccccgaggccgtgggc
cagtgcatcgaggccgcgggctacgagcacgagcccgacacccagaaatccctgctgagg
gcagcttcctttgggaagtgtttcctggataagttccccccggaggggttcgtgcgcatg
tgccaggacctgcgggtcctcaacgccatccgggactaccagatcgggatcccgctcacc
ttcacccaatacaagcagctcaccatcgaggtgctgctggacaggctggtgctgcgccgc
ctgtacccgctggccatccgcatctgcgagttcctgcgcctgccggagatgcagggcgtc
agccgcatcctggcacactgggcctgctacaaggtgcagcagaaggacaagtcggacgag
gaggtggcccaggccatcaaccagaagctgggggacacggcgggcatctcctactcggac
atcgccacgcgcgcctacgactgcggccgcgccgagctggccatcaagctgctggagtac
gagccccggagcggggagcaggtgccgctgctgctgaagatgaaacggagcaagctggcc
ctgggcaaagccatcgagagcggggacaccgacctggtgtacacggtggtgctgcacctc
aagaacgagctcaaccgcggctccttcttcatgaccctacagaaccagcccgtggccctg
agcctgtaccgccagttctgccggcaccaggagcgggagacgctgaaggatttgtacaac
caggacgacaaccaccaggagctgggcaacctgcacgtgctggggggctactgccagaag
cggatcgagggccgcgtggccgccctgcagaacgccctggacgagttctacaaggccaag
aacgactttgctgccaaggccacggaggagcagatcaagctgctgcggctgcagcggcac
ctgcaggaggagctggacaagccctacctggacctgtccctgcacgacaccgtggccacc
ctcatcctggacgggcaccacaagcgcgccgagcagctctaccgggacttcaggatccct
gacaagaggtactggtggctgaagatcaacgccctggccacccgcggggactgggaggag
atggagaagttctccaagagcaagaagtcacccattgggtacctgcccttcgtggaggtg
gcggtgaagcaccacaaccgctacgaggccaagaaatacgcgccccgcgtgccgcccgag
cagcgcgtcaaggccttcgtcctcgtgggggacctggagcaggcggccgaggcggccatg
gagcggcgcagcgaggccgagatgagcctggtgctggcccggtgctgccccggcaccgac
ggcgccctggccgagcggctgggccgggcacgggcacagctcctcaaaaagtga
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