Passer montanus (Eurasian tree sparrow): 120509438
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Entry
120509438 CDS
T07277
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa02010
ABC transporters
pmoa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120509438 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120509438 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmoa02000
]
120509438 (ABCA1)
Transporters [BR:
pmoa02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120509438 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
120509438
NCBI-ProteinID:
XP_039579975
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLIDNETFSDFLHHNVSMPSSAIEELLDAGVNL
QQVIVSGYRMRLRDLCNSSTSSEFLMIQNQTAAMDSEAFICTLSKEKLHAAEQAFRANLN
PLKPLQRQLSFNSSLWDLSETVETLRESIGNLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAIRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNSPEDFETENG
SVYTWMDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
IEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPGQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTHNLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTA
SVPESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKRVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctgtggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcacgaatgtcactttccaaataaagct
atgccttcggcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggtattgttggaaatttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggacaca
agtataaaggatgtccagaaggtcctgggaaaactacgcaagttgggaaattcctctggc
ttagacttgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatgtctctatgccatcatctgccatagaggagctactggatgcaggggtcaacctg
cagcaggtcattgtgtctggttaccgaatgcgactgagagatctctgcaatagctcaaca
tcatctgaatttctaatgatccaaaatcaaacggcagccatggactctgaagccttcatt
tgcaccttgtcaaaggaaaaactccatgcagccgagcaagccttccgtgccaacctgaat
cctttgaagcctcttcagagacaactttctttcaattcctccttgtgggatctgtcagaa
actgtggaaactttgagagagagcattggaaatcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctatcaggctgtgtcacgcatcgtgtgcggccatcctgaaggtggagga
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagctaatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaa
cccttgctgattgggaagatcttgtacactccagatacaccagctataaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacattgctgaaaggcaaagccctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaggattttgagacagaaaatggc
tctgtgtacacctggatggatgccttcaatgagacggaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacctggacaaactggagcctgtgcccacagaagtccggctc
attaacaagtccttggaacttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctgacagcacagaccttccccaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtg
atagaacaggccatcatcagggttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccgtgttacgtggatgacatatttctgcgtgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaaaggcatt
gtgtatgagaaggaagcccggctgaaagaaacaatgaggattatgggacttgacaatggc
atcctttggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggattg
ctggtgctgatcctgaagatggggaatctgctgccttacagcgatcctagtgtggtgttc
attttcctctcaatcttcggtgttgtgaccatcctccagtgcttcctcatcagcactgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccttatgtgctgtgtgttgcctggcaggatcacatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggttttggttgtgagtactttgcactgtttgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagctgtcatgatgctgtttgataccttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcatattggtttggggaggaaccacaagacagacagcacccccatcctggc
cagaagggatcttcagaagtctgcaaggaagaagagccagtgcatctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctc
acacttaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccattttgactggcttgttccccccaacttcaggaacagccttcatc
ctgggcaaagatattcgctctgagcttagcaccatcaggcagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctacgctcgg
ctgaaagggctgccagaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctagaacaagcaagctctctggtggcatgcagaggaag
ctctctgttgccttagcttttgttggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccttattctcgcagaggaatatgggaactgcttctaaaatatcggcaa
ggtcgcaccatcattctctccacgcaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggaaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtagattcttctctgagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacattgacaatagatgtg
tctgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttggcatttctagctatggcatctcg
gaaactactctggaggagatctttctgaaagtggctgatgatagcggtgtggatgcagaa
acctcagatggtacattgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccgtttacagaagatgatgcatttgatcctaatgactcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccaaatg
aagggctggaagctcacccagcagcagttcatggctctgttgtggaagaggatgcttatt
gccaagagaagccggaagggcttttttgcccagattgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccatttgggaagtatcccagcctggaacta
caaccctggatgtatgatgagcagtacacttttattagcaatgatgctccagaagatgca
ggcactcacaaccttttggatgctcttcttgataagccggggtttgggacacgctgtatg
cagggacattccatcccggacactccttgcactgtggggcagaaggaatggaccactgct
tcagtcccagagtcagtgctggacatcttcctgaaaggtaactggagcatggagaatcct
tccccatcttgcgagtgtagcagtgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcaggtggcctgccacccccacagcgtgagcaagacacagctgacatactccagaat
ctgacaggccgcaatatatcagactacctagtgaagacctatgcgcagatcattgggaaa
agcttaaagaataaaatctgggtgaatgagttcaggtatggtggcttttccttgggagcc
agcagttccctcgtgcttcctccaagtcatgaagtcactgatgccattaaacgggtgaag
aaaattttggagctggcacaggggagttctggggatcgatttctcaacagtttatcaagt
ttcatgaaaggcctggacacaaagaacaatgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcctgaatgtgatcaacaatgccatccttcgggccaacctccag
cagggtgaaaatccaagtgcttatgggatcactgccttcaatcacccactcaacctcacc
aaacaacagctctctgaagtagctctgatgaccacctctgtggatgtccttgtgtccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgttatctactgg
ctggccaactttgtgtgggatatgtgcaactacattgttccggccacactagttgtcatc
atcttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctcctcctgtttctctatgggtggtccatcacccctctcatgtatccggcctcctttgtg
ttcaaaatccctagcacggcatatgttgtgctgaccagtgtgaatctcttcattggcatc
aatggcagtgtggccacctttgtcctggagctcttcaccaacaataaactgaaggacatc
aatgacatcctgaagtctgtcttcctcatcttccctcacttctgcctgggccggggactc
attgacatggtgaaaaaccaggctatggctgatgctctggagagatttggagagaatcgg
tttgtgtcccctctgtcatgggacctggtgggcaggaacctctttgccatggcagtagaa
ggtgtggtgttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtgtatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagtggaggaggacagagtgacattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagttgataggatctgtgttggaatccctcctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaggaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaa
ctgctgacagggcgagagcacttggagttctttgctctcttgagaggtgttccagagaaa
gaagtctgtaaggttggcgagtgggcaattcggaaactgggccttgtgaaatatggagaa
aaatacgctgggaattacagtggagggaacagacgcaagctttccacagctattgccctc
attggagggccgcctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgtcgcttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctc
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaat
gggcgattcaggtgtctgggcagtgtccagcacctaaaaaacaggtttggagatggttac
accatagtggtgagaattgcaggggcaaacccagatctgaagcctgttgaggagttcttt
gggcacgctttccctggaagtgtcctaaaggaaaaacatcggaatatgctgcagtaccaa
cttccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaagaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgatgacgaccatactaaggacctgtcattgcacaaaaaccag
actgtggtggacattgcaatccttaactcctttctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
DBGET
integrated database retrieval system
