Passer montanus (Eurasian tree sparrow): 120509617
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Entry
120509617 CDS
T07277
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04142
Lysosome
pmoa04144
Endocytosis
pmoa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120509617 (CLTCL1)
04142 Lysosome
120509617 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120509617 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoa04131
]
120509617 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoa04147
]
120509617 (CLTCL1)
Membrane trafficking [BR:
pmoa04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120509617 (CLTCL1)
Exosome [BR:
pmoa04147
]
Exosomal proteins
Proteins found in most exosomes
120509617 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
120509617
NCBI-ProteinID:
XP_039580406
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMSDPTTPIRRPISAESAIMNPASKVIALKDAGKTLQI
FNIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAG
CQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNA
KPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKH
GVIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVE
EDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGNYADAAKVAASAPKG
ILRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGY
TPDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMEHSLLQQCTSFLLDAL
KNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHVAQLCEKAGLLQRALEHY
TDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYH
EQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGC
EEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLEL
IKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNY
DAPDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQ
LARAQLQKDLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVE
TELIFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLAST
LVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGKEFRLAQICGLHIVIHADELEELISYY
QDRGYFEDLIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR
AAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQF
YLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLFLVKPYLRSVQNHNNKGVNEALNNL
LTEEEDFQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKK
DRLYKDAMQYAAESKDAELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHN
IMDFAMPYFIQVMREYLTKVDGLFYKVDKLDASESLRKEEEQVAEPTPIVFGQQLMLTAG
PSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgacaagttcatctgcataagggagaaagtaggagagcaggcacaagtagtg
ataattgacatgagtgatccaacaacccccatcaggcgtccgatttctgcagaaagtgcc
atcatgaatccagcctctaaagtaatagcgctcaaagatgccgggaaaacacttcagatc
tttaacattgagatgaaaagtaaaatgaaagcccacacaatggcagaggaagtgatcttc
tggaaatggatatctgtgaatacagttgccttggtgacagagacagcagtgtaccactgg
agcatggagggagaatcacaacctcaaaagatgtttgatagacatgctagtcttgcaggc
tgccaaatcatcaattacagaacagatgaacatcaaaaatggctgctgctaataggaatt
tcagcacagcaaaatcgtgtggttggtgcaatgcagttgtactcggttgatagaaaagtc
tcccagcctatagaaggccatgcagcagcttttgcagaattcaaaatagagggaaatgcc
aaaccttctaccctcttctgttttgctgtgaggagtcctgcaggaggcaagctgcacata
atcgaagtaggtcagccagctactggaaatcagccatttgttaagaaagctgttgatgtg
tttttcccacctgaggcacagacagactttcctgtggcaatgcagattggaattaagcat
ggtgtgatttatctgatcacgaagtatggatatatccacatgtatgatttggagtctgga
gtgtgcatctatatgaaccgtattagtgctgatactatctttgtcacagctcctcatgaa
cctacctcaggcattattggtgtgaacaaaaaaggacaggtgctttctgtatgtgttgag
gaagacaacattgtgaactatgcgacgaatgttctccagaaccctgacttgggactgcga
atggctatacgtagtaacctagcgggggcagaggagttatttgccagaaagttcaacaca
ctatttgctcaaggaaactatgcagatgctgctaaagtagctgcatctgcaccaaaggga
attctacgtaccagtgatacaattaggaagttccagagtgtaccagctcagcctgggcag
gcttctcccctgctccagtactttggaatattgcttgaccaggggcagctgaacaagttt
gaatctctggagctctgtcgccctgtcctgcagcagggccgcaaacagcttctggagaag
tggctgaaggaagacaagctggagtgctcggaggagctgggagacttggtgaagacggct
gacccaaccctggcactcagcgtctaccttcgagctaatgtgccaaacaaagtgattcag
tgctttgctgaaactggccaattccagaaaatagtgctgtatgctaagaaggttggctat
accccagactggatcttcctactaagaagtgtgatgagagtcagtccagaacaaggtctg
cagttctctcagatgctggtacaggatgaggagccactggctaacatcaaccagattgtg
gatgtgttcatggagcacagtcttctgcagcagtgcacatcctttttgttggatgccctg
aaaaataaccgccctgcagaaggccaccttcagacccgcctcctggaaatgaatttgatt
catgccccgcaggttgcagatgccattctcggaaaccaaatgtttacacactatgatcgt
gctcatgttgcccagctgtgtgaaaaggctggcttgctccagcgagctttggaacactac
acagatctctatgatattaaacgtgcagttgttcatactcacctcttgaatcctgagtgg
cttgtgaacttctttggctctctctcagttgaagactctgtggagtgtttgcgtgccatg
ctgtcagccaacattcggcaaaacctacagctctgtgtgcaagtggcttctaaataccat
gaacagcttggcacccagtctcttgtggagctttttgaatctttcaaaagctatgaagga
ctgttctatttcttgggttccattgtaaactttagccaggatccagatgttcacttcaag
tacatccaggcagcttgcaagactggtcagataaaggaagtggaaagaatctgccgtgaa
agtaactgctataacccagaacgagtgaagaactttctgaaggaggcaaagctcacagat
cagcttcctctcatcatcgtctgcgatcggtttgactttgttcatgacctggtgctctat
ttatatcgcaataatctgcagaagtatatcgagatctatgtacagaaggtgaatcctagc
cgtataccagcagtggttggagggcttcttgatgtagattgttctgaagatgtcatcaag
aacttgatcatggtggtgagagggcagttctccacagatgagctggtggctgaagtggaa
aaaagaaatcggcttaagttgctgttgccctggcttgaatcaaggattcatgaaggctgt
gaagaacctgcaactcataatgctttggccaaaatctacattgacagtaacaataatcca
gagcgcttccttcgtgagaatccttactatgacagccgtgtagttggcaaatactgtgaa
aagagggaccctcatctggcctgcgttgcttatgagagggggcagtgtgatctggaactc
ataaaggtgtgcaatgagaactccctgtttaagagcgaggctcgctacctggtgcgcagg
aaggaccctgagctctgggcaaatgtactggaagaaaacaacccattcaggcggcagctt
attgaccaggttgtccaaacggctttatcagagacacaggatccagaggaagtttctgta
actgtgaaagctttcatgactgctgatctgccaaatgaactgattgagttgttggaaaaa
attgtcttggataattctgtattcagtgaacacaggaatctccagaatctgctgatcctg
actgccattaaggctgaccgcacccgcgtgatggaatacatcaatcggctggataactat
gatgccccagatattgcaaacattgccatcagtaatgagctatatgaggaagcctttgct
atattcagaaaatttgatgtcaatacttcagcaattcaggtgctgattgagcacattggc
aacttagaccgtgcttatgaatttgcagagagatgtaatgaaccagcagtgtggagccaa
ctggccagagcacagctccagaaggacttggtgaaggaagccattgactcctatataaag
gcagatgatccatctgcctacatggaagttgttcaggcagctaatagaaatgataattgg
gaggacctagtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagag
acagaacttatttttgctttggcaaaaactaatcgtctgtcagaactggaggagtttatt
agtggccctaataatgcccatatacaacaggtcggtgatcgctgttacgaggaggggatg
tatgaagcagcaaaacttctctataacaacgtatccaactttgctcgcctggcatctacc
ttggtgcaccttggggagtatcaggcagcagtggacagtggccgcaaagccaacagcaca
aggacttggaaggaggtctgctttgcctgtgtggatggaaaagaattccgcttggcacag
atctgtggcttacacatagtcatccatgctgatgagcttgaggagctgatcagttactat
caggatcgtggctactttgaagacctcattgcccttttggaagccgctctgggcctagag
cgtgctcacatggggatgtttactgaacttgctatcttatactccaaattcaagcctcag
aaaatgagggaacatctggagcttttctggtctagagttaatattccaaaggtgctcaga
gctgcagaacaggctcatctctgggcagaacttgtattcctgtatgacaagtatgaggag
tatgacaatgcaataattactatgatgaatcatcccactgatgcctggaaagaaggccag
tttaaagacataattgccaaggtggccaatgtggagctgtactacaaagcattgcagttc
tacttagactacaaacctctgctgatcaatgatctcctgcttgtattatctccacgactg
gaccacaccaggacagtcaactttttctcaaaggttaatcagctatttctagtaaagccg
tacctgcgttcagtccagaaccataacaacaaaggagttaacgaagctctaaacaacctt
ttaacagaagaagaagatttccagggtttgagagcttccattgatgcctatgacaacttt
gataacataacattggctcagcgtctggaaaagcatgaactaattgaatttaggcgtatt
gcagcgtacttgtacaagggtaacaaccgctggaaacagagcgtggagctgtgcaagaaa
gaccgtctgtataaggatgctatgcagtatgctgcagagtccaaagatgcagagctggct
gagaagctgctccaatggttcttggaagaaggcaagcaggaatgctttgcagcctgcctt
ttcacatgctacgacttgctgcacccagatgtagtccttgagttggcatggagacataat
atcatggactttgcaatgccttatttcatccaagtgatgagagagtaccttaccaaagtt
gatggactgttctataaggtggataaacttgatgcttctgaaagcctaagaaaagaagag
gaacaagtagctgaacccactccaatagtatttggccagcagttgatgttaacagcaggc
cccagtgcagtacctccccaggcaaacttcccatatggatacacagcaccaggattcacc
cagccgcctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
