Passer montanus (Eurasian tree sparrow): 120510259
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Entry
120510259 CDS
T07277
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03082
ATP-dependent chromatin remodeling
pmoa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120510259 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120510259 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmoa01009
]
120510259 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120510259 (SMARCB1)
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120510259 (SMARCB1)
Protein phosphatases and associated proteins [BR:
pmoa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120510259 (SMARCB1)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120510259 (SMARCB1)
SWI/SNF complex
120510259 (SMARCB1)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120510259 (SMARCB1)
PBAF complex
120510259 (SMARCB1)
SWI/SNF complex
120510259 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
120510259
NCBI-ProteinID:
XP_039581805
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MFRGSLYKRYPSLWRRLATVEERKKIVASHENQRSHSPRRYHGYTTLATSVTLLKASEVE
EILDGNDEKYKAVSISTEPPTYLREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMG
RDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEM
FSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVD
QFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVE
IAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggggctccctgtacaagaggtacccctcgctctggaggcgcctggccacggtg
gaagaaaggaagaagattgtggcctcgcatgaaaatcagcggtctcacagtccccgaaga
tatcatggctacacaacattagccaccagtgtgacgctgctgaaggcctctgaagtggaa
gagatcttggatggaaatgatgagaagtacaaggcagtgtctatcagcacagaacctcct
acctacctcagagaacagaaagcaaagaggaacaaccagtgggtgccaaccctgcccaac
agctctcatcacctggatgctgtgccgtgctcaacaaccatcaacaggaaccgcatgggc
agggataagaagagaacattccctctgtgctttgatgaccatgacccagcagtgatccat
gagaatgcatcccagccagaggttctggttccaatcaggcttgatatggaaattgatggg
cagaaactccgagatgcatttacgtggaacatgaatgaaaaactgatgaccccagaaatg
ttctccgagattctttgtgatgacctggatttgaatcctctgacctttgtccctgccatt
gcctctgccatccgacagcagatcgagtcgtacccgactgacagcatcctggaggatcag
tcagaccaacgagttatcattaagctgaacatccatgtaggaaacatctccctcgtagac
cagtttgagtgggacatgtcagagaaggagaactccccagagaagtttgccttgaagctg
tgctcagagctgggcctgggcggggagtttgtcacgactattgcctacagcatccgggga
cagctgagctggcaccagaagacctatgccttcagtgagaaccctttgcccaccgtggag
atcgcgatccgcaacacgggggacgctgaccagtggtgccctctcctggaaaccctcaca
gacgccgagatggagaagaagatcagagaccaggacaggaacacaaggcgcatgagacgt
ttggccaatactgctccagcctggtag
DBGET
integrated database retrieval system
