Passer montanus (Eurasian tree sparrow): 120510355
Help
Entry
120510355 CDS
T07277
Symbol
POLE
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03030
DNA replication
pmoa03410
Base excision repair
pmoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120510355 (POLE)
03410 Base excision repair
120510355 (POLE)
03420 Nucleotide excision repair
120510355 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoa03032
]
120510355 (POLE)
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120510355 (POLE)
Enzymes [BR:
pmoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120510355 (POLE)
DNA replication proteins [BR:
pmoa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
120510355 (POLE)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
120510355 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
120510355
NCBI-ProteinID:
XP_039582070
LinkDB
All DBs
Position
Unknown
AA seq
2295 aa
AA seq
DB search
MGLRDGAEPEPRRARRGRRPGGPREPADGAGSGRDDAPALSALKRLERAQLTDRLDALFG
FERLAEPGERTGWLINMHPTEVLDEDRQSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQ
KGCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFSTVEDLLKVRKE
ISPAVRKNRERDQASDVYTTMLSSALSRASLSTDEEGVSKKTANQMDNIVDMREYDVPYH
VRLSIDLKIHVAHWYNVRYRGNTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAD
TDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIRRWFE
HVQETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLR
WVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYM
YMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTE
DGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEESLP
LDQVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEA
TCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHE
LSQEEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFK
GLHKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSM
EMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVT
ISYPGAMLNILVKEGFTNDQYQELQDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEG
KKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKV
ADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMV
KDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILD
WDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVS
EGKKQILASRPVEGTHSSQVSDIEDFGAVKIPLPLVPIANKRKRIPAAEESQELSQDLEL
SQSWREILGPPPSLGTTKEERLVWLRFHQKKWELQARQRQERRKRRRLEDGGVLAGGGLV
RDALSKGLSSYLRRTARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFY
VNQRVPKPEEGTAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVY
ETQVPLLFRALIHLGCVCMVSRQLVRHLAGREAETFNIEHLEMRSLAQFTYLEPGSIRHI
YLYHSSQGSKAVLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSVERTALLEKVGKELLP
PDKHTFEVRAETDPKAIYRGVQRLLLGYKDERRGPTLVAVQSNWGLKQLASGIPIIEEFP
LVPIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTF
GSDLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCL
ELDIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETAL
CSNTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRMLHNMMKK
LFLQLVAEFKRLGSSVVYANFNRIILCTKKRHIEDAISYMEYIINSIHSKEIFHSLTISF
SRCWEFLLWMDPANYGGIKGKVDSRIHYGEKDTSKTLEEESEEEEEEVAREEEEEKGEPD
VEELLENNWNIVQFLPQAGSCQSYFLMIISAYIVAVYHSMKEELRRNTPGSTPIKRRSIS
QVSQEALGELRAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPVLP
GSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSY
VLPEVICRNCNFCRDLDLCKDPALSQDRLVLPGWLCPSCHVQYDTDVIEMALVEALQKKL
MAFVLQDLVCKKCHGVKETHMPVYCSCAGDFALTISSQVFMDHVSVFQNIARHYGMAYLL
ETIEWLLHTNLQLQQ
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgggacggcgccgagcccgagccgcggagagcgcggcgggggcggcggccg
ggcgggccccgggagccggcggacggcgccgggtccgggcgtgacgatgcccccgcgctg
tctgcactcaagcgcctggagcgggcacagctcacggaccggttggacgcgctgttcggc
ttcgagcggctcgcagagcccggtgagcggacaggctggctcatcaacatgcacccgacg
gaggtgctggatgaggaccggcagtcagtcagcgcagtggactactacttcatccaggag
gatgggagccgcttcaaggtggccctaccctacaagccctacttctacattgccacccag
aagggctgtgagcgggaagtgtcctccttcctctccaagaagttccaagggaagattgca
aagctggaaactgtccccaaagaggacttggacctgccaaaccacttggtaggcctgaag
aggaactacatcaagctgtccttcagcacggtggaggacttgttgaaggtgcggaaggag
atctctcccgctgtgcggaaaaacagggagcgagaccaggcgagtgatgtctacacgacc
atgctgtcgagtgctctgagtagggccagtctaagcacagatgaggaaggagtgtcaaaa
aaaactgccaaccagatggacaacattgtggatatgcgggaatatgatgtgccttaccac
gttcgcctttccatcgacctgaagatccatgtggctcactggtacaacgtgcgataccgg
ggcaacacctacccacctgaaatcacccgtcgagatgaccttgtggagaggccggatcct
gttgttcttgcctttgatattgaaacaaccaaactgcctttgaagtttcctgatgcagac
acagaccagatcatgatgatctcctacatgattgatgggcagggctacctgatcacaaac
agggagattgtgtcagaggacattgaagactttgagtttactcccaagccggagtatgag
ggtccattttgtgtctttaacgaaccagatgaggctcatttaatccggagatggtttgaa
catgtccaggagaccaaacccaccatcattgtcacatacaatggagacttctttgactgg
ccctttgtggaagcaagagcagcagctcatggaattaatatgtatcaggaaattgggttt
cagaaggacagccagggagagtacaaagcatcccagtgcatccacatggactgtttgagg
tgggtgaagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaa
gcaaaactgggttacgatccggtggagctggaccctgaggagatgtgccggatggccaca
gaggagcctcagaccttggccacctactcagtgtctgatgccgttgctacttactacatg
tatatgaagtatgtgcatcccttcattttcgccttgtgtactataattcccatggagcct
gatgaggtgttaagaaaaggatctgggacactgtgtgaggcactgctgatggttcaggcc
taccatgccaacatcatcttccccaacaagcaggagcaagaattcaacaaacttacagaa
gatggacatgtgctggactcagagacctatgtgggaggccacgtggaagcactggaatct
ggggtcttccgcagtgacattccctgccgcttcaaaatgaatcctgctgcctttgacttc
ctggtgcagcatgtggagaagaccctgcagcatgccatagaggaagaggagagtcttccc
ttggatcaggtcaccaacttccaggaggtttgtgatgaaatcaaggccaaactgaattcc
ctgaaggatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggcc
atgtaccccaacatcattctgaccaacaggttgcagccctccgccatggtggatgaggcc
acatgtgctgcctgtgacttcaacaagccaggtgccaactgtcagcgccggatgacgtgg
cagtggagaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcagcag
ctggagtcagagaagttccctcccttgttccctgatggaccaccccgtgccttccatgag
ctctcccaggaagaacaagccaagtatgagaaaaagcgcctagcagattactgccgcaag
gcatacaagaagatccatgtcaccaaggtggaggagcgagtcaccaccatctgccaacga
gaaaactctttctatgtggacacggtgcgagcattccgggaccgccgatatgagttcaaa
gggctgcacaaggtgtggaagaagaagctgtctgcagcagtggagacaggagatgcctct
gaagtgaaacgctgcaagaacatggagatcctctatgactcccttcagctggcccacaag
tgcatcctcaactccttctatggatatgtcatgcggaaaggagctcgttggtactccatg
gaaatggctggcattgtctgcttcacaggggcaaatatcatcacccaggccagagagctg
atcgagcagattgggagacctctagagctggataccgatgggatttggtgtgtccttccc
aacagcttcccagagaactttgttatcaagtcaaccaatatcaagaagccaaaagtaacc
atctcttacccaggtgccatgctgaacatcctggtgaaggaaggcttcacaaatgaccag
taccaggaactgcaggatccagcctcactcacctacgtcacacgctcagagaacagcatc
ttttttgaagtggatggtccatacctagccatgatacttccagcctccaaagaggagggc
aagaagctgaagaaaaggtatgctgtgttcaatgaggatgggtccctggctgagctgaag
gggtttgaggtgaaacgccggggagaactgcagctggtgaagatattccagtcgtctgtg
tttgaagcctttctgaaaggcagcaccctggaggaggtctacgcttctgtggccaaggtg
gccgattactggctggatgtgctctacagcaaggctgccaacatgcctgattcagagctg
tttgagctcatctcagagaaccggtccatgtcacgcaagctggaggactacggggaacag
aagtccacctccatcagcactgccaagcgcctggcagagtttttgggggaccagatggtg
aaggatgcagggctgagctgtcgcttcatcatttccaagaaaccagaagggtctcctgtc
actgagagggccatcccccttgccatcttccaagccgagcccagtgtgcgcaaacactac
ctccggaaatggctgaagagcccctcgctgcaggacttcaacatccgtgcgatcctggac
tgggactactacatcgagagactgggcagcaccatccagaaaatcatcaccattcctgca
gccctgcagcaggtaaagaacccagtgccacgggtccgacacccagactggcttcacaag
aaactcctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctttttgtttca
gaaggcaagaaacagattcttgccagccgacctgtcgaggggacacacagctcacaggtc
agtgatatagaggactttggggctgtcaagatccctctgccactggttccaattgcaaat
aagcggaagcgtatccctgcagcagaggagagccaagagctgtcccaggacctggagctg
tcccagtcctggcgagagatcctgggcccacctccatcccttggcaccaccaaggaggag
cgtctggtctggctgcgcttccaccagaagaagtgggagctgcaggctcggcagcggcag
gagcggaggaagaggcggcggctggaggatggtggggtgctggcaggtggaggattggtc
cgcgatgccctctccaaagggctgagcagttacctgcgccgaacagcgcgcagcatcctg
gacttgccctggcaggtcgtgcagattgctgagaccagccagcctgggctgttccggctg
tgggcggtgatagggagcgacctgcactgcatcaagctgagcatcccccgtgtcttctat
gtcaaccagcgtgtcccaaagcctgaggagggaacagcctacaggaaggtaaacaggatc
ctgccccgctcaaacttagtttataacttgtacgaatactctgttcctgaagacatgtac
caagagcacatcaatgaaattaatgcagacctctctgctccggacatcgagggagtgtat
gagacacaggtgccactgctcttccgtgccctgatccacctgggctgtgtgtgcatggtc
agcaggcagcttgtccggcacctggcagggcgagaggctgaaaccttcaacattgagcac
ctggagatgcgctcactggctcagttcacttacctggagcctggaagcattcgccacatc
tacctgtaccacagctcccagggcagcaaggcagtcctgggcctcttcatcccatcacag
cgcaaggctgccgtctttgtgctggacaaggtacgcagcaaccagatgccaaacctcacc
accttgttctcggtggagcgcacagctctgctggaaaaggtgggcaaggagctgttgccc
ccagacaaacacaccttcgaggtgcgtgctgaaaccgaccctaaggccatctacagaggt
gtccagcggctgctcttgggctacaaggatgagcgccggggccccacgttggtggctgtg
cagtccaactggggcctgaaacagctggcgagtgggatccccatcattgaggagttcccc
ttggtccccatccggctggtagatgacatcagctactcggtcctggactggcagcgccat
gccgcccgccgcatgattcgccactacctcaacctggacacctgcctttcccaggctttt
gagatgagcaggtactaccacatccccattggaaacctccctgatgacatctccaccttc
ggctccgacctgttcttctcacgccaccttcgtcgtcacaaccacctgttgtggctgtcc
cccacggcccgccccgacctgggggggaaggaggctgatgacaaccgcctggtaatggag
tttgatgagagagcctcagttgagatcaacaaccctggctgctactccacagtgtgtctg
gagctggacatccagagcctggctgtgaacaccgtgttgcagtcccaccacgtgaatgac
atggaaggaggctccagcatgagcattagcttcgatgtgattcagcaggcatccctggag
gacatggtcacagggaaccaagctgccaacatcccagccagctatgatgagactgccctc
tgctccaacactttcaggattttgaagagcatggtggtgagctgggtgaaggagattaca
cagtaccacaacgtctatgcagacaaccaggtcattcacttttaccgctggctccgctct
ccttcctccctgctttatgacccagcactgcaccgcatgctccacaacatgatgaagaag
cttttcctgcagctggtggctgagttcaagcgcctgggttcctctgtggtctacgccaac
ttcaaccgcatcatcctgtgcaccaagaagcggcacattgaggatgccatcagctacatg
gagtacatcatcaacagcatccactccaaggagatcttccactctctgacaatctcgttc
tcccggtgctgggagtttctgctctggatggacccagcaaattatggaggtatcaaggga
aaagtggattctcgcatccactatggggagaaggataccagcaagacgttggaggaggag
agtgaggaggaagaggaggaggtggcaagggaagaagaggaggagaaaggggaaccagat
gtggaggagctgctggagaacaactggaacatcgtgcagttcctgccccaggccggctcc
tgccagagctacttcttgatgatcatatcagcctacatcgtggctgtgtaccacagcatg
aaggaggaactgcggcgtaacacccctgggagcacccccatcaagaggaggagcatcagc
caggtgtcccaggaggctctgggggagctgagggccatgcctggcatgatcaccttttca
caagattacgtggccaatgagctcacacagagcttcttcaccatcacccagaagatccag
aagaagatggctggttctcagaatgccacagagccctcagacatgttcccagtcctgcct
ggctcctacttgccactcaacaacccagctctggagttcatcaaatatgtctgcaaggtc
ctctccctggatgccaacataaccaaccaggtgaacaaactacgtcgggacctgctgcgc
ctcatcgaggtgggcgagttctcagaagcagcccagtttcgggacccttgccgctcctat
gtgcttcctgaagtcatctgcaggaactgcaacttctgcagggacttggacctgtgcaag
gaccctgccctttcccaggacagattggtgctgcctggctggctctgccccagctgccat
gtgcagtacgatactgatgtcattgagatggcactggtggaagctctgcagaagaagctg
atggcctttgtgctgcaggacctggtgtgcaaaaagtgtcatggtgtgaaggagacgcac
atgcctgtgtactgcagctgtgctggagacttcgccctcaccatctcctcccaggtcttc
atggaccatgtcagtgtcttccagaacattgcccggcactatggcatggcctacctgctg
gaaaccattgagtggctgctgcacaccaacctccagctccagcaatga
DBGET
integrated database retrieval system
