Passer montanus (Eurasian tree sparrow): 120511021
Help
Entry
120511021 CDS
T07277
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120511021 (CHD5)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120511021 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
120511021
NCBI-ProteinID:
XP_039583516
LinkDB
All DBs
Position
Unknown
AA seq
1885 aa
AA seq
DB search
MSENEEEIEEKSESEGSDYNPNKKKKKKLKDKKEKKPKRKKKDEEEDDNEDGSLKEPKSS
AQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWRE
FSANNPFKGSSAAAAAAAVAAAVETVTIAPALPASPQPSALPAVVRKAKTKEGKGPGVRK
KIKGSKDGKKKGKGKKTAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSMRSE
CSAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEL
EKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEEDDHMEFCRVCKDGGELLCCDTC
PSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAPPPPAAAPQLAL
PPPKALEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYG
SGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDL
PYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPET
PLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIV
FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSF
EDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQS
KFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI
KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG
NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLR
DGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFL
LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEER
ITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAM
PDAVTPFSDTLSTKGGAATPGMKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDA
TDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQ
EDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSG
RRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWL
VRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRK
KVQEFEHVNGKYSTPDLLLEGPESKRSSEVVSSDPNTPVPASPAHTHTGPGALADKTEAQ
LGFHEEKDLMEQKPRKVSDSQVSASAEAESEEHLESCDNKERPRKEKQEDCEKAEPSSEP
LAKGLFPPADEGIQEQEKPLEKAELSSSPGKGEDKEVKPEDGKEEEKEPSDAQQNGDKEE
EEEGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDIWHRRHDYWLLAGI
VTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRR
AAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELL
SDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQGSFGSAPIFNNSFGP
NFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatgaagaggagatcgaggagaaatcagaaagtgaagggagtgactataat
cccaacaaaaagaagaagaaaaaactgaaggacaagaaggagaaaaagccaaaacggaag
aagaaggatgaagaggaagatgacaatgaggatggaagtttaaaggagcccaagagctca
gcccagctcatggaggaatggggtctcgatgacgtagattacgttttctcagaagaggat
taccacactctgaccaattacaaggctttcagccagttcctcaggcctctgattgccaag
aagaaccccaagatccccatgtccaagatgatgacggtgctgggcgccaagtggcgagag
ttcagtgccaacaaccccttcaagggcagctcggcggcggcggccgcggcagctgtggct
gcagctgtggagactgtcaccatcgccccggcgctccccgccagcccccagccctctgcc
ctgcccgccgtcgtcaggaaggccaagaccaaggagggcaagggtccaggtgtacggaag
aaaatcaagggctccaaagacgggaagaaaaaggggaaagggaaaaagacggcaggcttg
aaatttcggtttggaggaatccccagcaaaaggaaaaagggctcctctagcgaagaggag
gagcgggaagaatctgactttgacagcgccagcatcaacagctcctccatgcgctccgag
tgctcagctggcctggggaagagagggaagaagaggaaaaagaaaaagaggattgaagag
ggggacgggtacgagactgaccaccaggactactgcgaggtgtgccagcagggcggggag
atcatcctgtgcgacacctgcccccgcgcctaccacctggtgtgcctggaccccgagctg
gagaaggcccccgagggcaagtggagctgcccccactgcgagaaggagggcatccagtgg
gagccgaaggaggaggaggaggaggaagaggatggtggcgaggaggaggaggaggatgac
cacatggagttctgccgggtctgtaaggacggaggggagctgctgtgctgtgacacctgc
ccatcctcctaccacctgcactgcctgaacccaccactgccagagatcccaaacggcgaa
tggctctgcccacgctgtacatgccctcccttgaagggcaaagtgcagcgcatcctgcac
tgggcctggaaggagccgccggccccgccgccgcccgctgccgccccacagctggctctg
cccccgcccaaggcgctggaggggatccccgagcgcgagttcttcgtcaagtgggccggc
ctctcctactggcactgctcctgggtcaaggagctgcagctggagctctaccacaccgtg
atgtaccgcaactaccaacgcaagaacgacatggacgagccgccggccttcgactacggc
tccggggacgaggacagccagagggagaagaggaagaacaaggacccccagtatgccaag
atggaggagcggttctaccgctacggcatcaaaccggagtggatgatgatccaccgcatc
ctgaaccacagctttgacaaaaagggagacatccattacctgatcaagtggaaggacctg
ccctatgaccagtgcacctgggagatcgatgacatagacatcccctactatgagaacctc
aaactcctctactggaaccacagggagctgatgctgggggaggacacgcgccctctgaag
aagctgaacaagaaagggaaaaagctgaaagaggagaagctggaaaaacctccagaaaca
cctcttgtggatcctacagtgaagtttgacaagcagccctggtacattgatgccacggga
ggcacgctgcacccttaccagctggaagggctgaactggctgagattctcctgggcacaa
ggcacagatacaatcctggctgatgagatggggctagggaagacggtgcagactattgtg
ttcttgtattccctgtacaaggagggccactccaaagggccgtacctagtcagtgccccc
ctctccaccatcatcaactgggagcgagagtttgagatgtgggcgcctgacttctacgtg
gtgacctacacgggggacaaggagagccgctcggtcatccgggaaaacgagttttctttt
gaagacaacgccatccgcagcgggaagaaggtgttccgcatgaagaaggaagcccagatc
aagttccatgtcctgctcacgtcctatgagctgatcaccattgaccaggcagtgctgggc
tccatagagtgggcctgtctggtggtggatgaagcacacaggctgaagaacaaccagtcc
aaattcttcagagtactgaatagctacaagatcgattacaagctgctcctcacagggact
ccgctccagaacaacttggaagagctcttccacctgctcaatttcctgactccagagagg
tttaacaacctggagggcttcctggaggagtttgcagacatctccaaggaggaccagatc
aaaaagctgcacgacctgctgggtccccacatgctgcggcggctcaaggccgatgtgttc
aagaacatgccggccaagacggagctgatcgtgcgcgtggagctcagccagatgcagaag
aagtactacaaattcatactgacaaggaactttgaagccctgaattcgaaaggtggtggg
aaccaggtctcgctgctcaacatcatgatggacctgaagaagtgctgcaatcacccatat
ctgttccctgtggcagctgtggaggcccctgtgctgcccaatggatcttatgatgggaat
tccttggtcaaatcttctgggaaactgatgctgctccagaagatgctgaagaagttacgg
gatggcggtcacagagttctgatcttctcgcagatgacaaagatgctggatttgctggag
gatttcctggagtacgaaggctacaagtacgagcgcattgacgggggcatcaccggcggc
ctgcgccaggaggccatcgacaggttcaatgctcctggggctcagcagttctgcttcctc
ctctccacccgtgccggcggtctgggcataaaccttgctacagctgacactgtcataatt
tatgattctgactggaatccccacaatgacatccaggcgttcagcagagctcaccgcatc
gggcagaacaagaaggtgatgatttaccgcttcgtgaccagggcctctgtggaggagcgc
atcacccaggtggccaaaaggaagatgatgctcacccacctggtggtccgcccggggctc
ggctccaagtcgggctccatgaccaagcaagagctggatgacatcctcaagttcgggaca
gaagagctcttcaaggatgatgtggagggcatggtgtctcagggccagcggattgcaatg
ccagatgctgttacccctttctcagacacactgtcaacaaaagggggtgcagcaaccccc
ggcatgaaaaaaaagcatggtagcaccccaccaggtgacaataaggatgtagaggacagc
agtgtgatccactacgatgacgctgccatctctaagcttttggaccggaaccaggatgcg
actgacgacacagagctgcagaacatgaatgagtatctcagctcctttaaagtggctcag
tatgttgtgagagaagaggacggtgtggaggaggtggaaagggagatcatcaagcaagag
gagaacgtggaccctgactactgggagaagctgctgcggcaccattatgagcagcagcag
gaagatctggccaggaacctgggcaaaggaaagagaatccgcaagcaggtcaactacaat
gacacctctcaggaggaccaagagtggcaggacgagctctctgacaaccagtcagagtat
tccattggctctgaggatgaggatgaagactttgaagagaggccagaaggccagagtggc
agaagacaatcacggagacagctgaagactgacagagacaaacctctccctcctttgctg
gcaagagttggggggaacatcgaggttctgggcttcaacgcccggcagcgcaaggcattc
ctgaacgccatcatgcgctggggaatgccaccccaggatgccttcaactcccactggctg
gtccgggacctgcgagggaagagcgagaaggagttcagggcatacgtgtctctgttcatg
agacacttgtgtgagcctggggccgatggtgctgaaacctttgctgatggtgttccccgg
gaggggctgtctcgccagcacgtgctgactcgcattggggtcatgtcactagtaaggaag
aaggtccaggagttcgagcatgtcaatgggaagtacagcaccccagacctgcttcttgag
ggcccagagagcaagagatccagcgaggttgtgtcttcagatcccaacacgcctgtcccg
gccagtccagcacacacacacacgggaccaggagcccttgcagacaaaacagaagcacaa
ctggggttccatgaggaaaaggacttgatggaacagaagcccagaaaggtgtctgacagc
caggtatctgcaagtgccgaggcagagagtgaagagcacctggaaagctgtgacaacaag
gagaggccaaggaaagagaagcaagaggattgtgaaaaggctgagccttcttctgagccc
ctggcaaaaggcctgttccctcctgcagacgaggggattcaagagcaagagaagcctttg
gagaaggcggagttgagcagcagcccagggaagggggaggataaagaagtcaaaccagag
gatggcaaggaggaggagaaggaaccaagtgatgcccagcaaaacggtgacaaagaggaa
gaggaggagggaaaaaaggatgacagaaacatgaacttcagattcatgttcaacattgct
gatggtggcttcacagagctgcacacgctgtggcagaatgaggagagggctgccatgtcc
tctggcaagatctacgacatctggcaccgccgacatgactactggctgttggcaggaatt
gtcactcatggctatgcccgctggcaggacatccagaatgacccacgctacgtgatcctg
aacgagcccttcaagtcagagatacacaaggggaactacctcgagatgaagaacaagttc
cttgcccggcgttttaagttgctggagcaggccctggtgattgaggagcagctgcggagg
gcggcgtacctcaacatgacccaagaccccagtcatccggccatggcactgaacgcacgg
ctggcagaagtggagtgccttgctgagagccaccagcacctctccaaagagtccctggct
gggaacaagcctgccaacgctgtcctgcacaaggtactgaaccagcttgaggagctgctg
agtgacatgaaggctgatgtgacacgcttgccctccatgctgtcccgcatcccgcccgtg
gctgcccggctgcagatgtcagagcggagcatcctcagccgcctggccacccgtggaggg
gatccagctgcccagggctcctttggctctgccccgatcttcaacaacagctttgggccg
aatttccgtggtcctgggccaggtgggattgtcaactacagccagatgcctctgggaccc
tatgtgactgatatttag
DBGET
integrated database retrieval system
