KEGG   Passer montanus (Eurasian tree sparrow): 120511227
Entry
120511227         CDS       T07277                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120511227 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmoa03019]
    120511227 (WDR33)
Messenger RNA biogenesis [BR:pmoa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     120511227 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Collagen Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 120511227
NCBI-ProteinID: XP_039583928
LinkDB
Position
Unknown
AA seq 1322 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPLHQGGGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGSAGPQGHLGPQGLPGSQAHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGSMLG
PPQEMRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLG
DGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSDR
RHEQNSGGPEHGPERGLFRGGQDWSDGRDSRGMPDRRGPHPDFHDDFERPDDFRDDFHPD
KRFGHRLREFEGRGGPPLQEEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDD
RYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPEENSRGR
DHGARGRGRGALRGARKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPAS
RERSSSLQGMDMASLPPRKRPWHDGPGTSDHRDMDAPGAPPEERGKGRANSGPSQRAPKS
GRSSSLDGDHHDGFHREEAFGGGPGAGNNPSRGGRSSSNWGRGNNMNSGQSRRGGSRGGR
GR
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggccacggagatcggctccccgccgcgcttcttccacatgccgcgcttccagcaccag
gcgccgcggcagctcttctacaagcggcccgacttcgcccagcagcaggccatgcagcag
ctcaccttcgacggcaagcgcatgaggaaagctgtcaacagaaagaccatcgactacaat
ccttctgtcatcaaatatttggagaacagagtgtggcagcgcgaccaacgagatatgcga
gcgatccagcccgatgcagggtattacaatgatttggtgcctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcggacgtctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggaattcactttatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggagcagatgtgaaatgtgtcgactggcatccaaccaaggggttagttgtg
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacactacatgctcacaaaaacacagtgatggaggtgaaactgaatctcaatggc
aactggctgctgacagcttctcgtgaccacctctgcaagctcttcgacatccgcaacctg
aaggaagaacttcaggtcttcagggggcataagaaagaggccacagctgtggcctggcat
cctgttcatgaagggctgtttgccagtggagggtctgatgggtccttgctgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctggcatggcatccccttggacacattctgtgttcaggctcgaatgatcacaccagcaag
ttttggactagaaatcgacctggagataaaatgcgagatcgttacaacttgaacctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatctggagcccaacagc
ctggcagttattcctgggatgggaattcctgaacagttgaaaatagctatggagcaggag
cagatggggaaagatgagtccaatgacattgagatgacaatcccaggactggattgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaaccaataccagcacagtttcagcaggcctggatgcaaaataaagttcctttgcctccc
ccacctgagccactgaatgatagaaaggaggatattaagctggaggagaaaaagaaatca
caggcagagattgagcaggaaatggcagcacttcagtacacaaacccacaactcctggag
caactgaagattgagagacttgcacaaaagcaagctgagcaggtgcagcccccgccccca
ggaggatctctccatggacctcagcctttcccagggcaaggcccaatgtcacagatgcct
caagggtttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttcagacctccaggaccccaaggacaaatgggacctcaa
ggtccattacaccaaggaggtggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaagggcctccacaaggaatgccacggcctcaggatttacacggacatcaagga
atgcagagacacccgggccctcatgggccaatggggccgccaggcccacagggcagcgct
ggcccacagggacacttgggaccgcagggcctgcccggctctcaggctcatttaggacca
cagggcccgcctggcccacaaggtcacctgggtccccagggtccccctggaggtcaagga
atgcaggggccacctggtccacgaggaatgcaaggacctcttcctcacggcatgcaagga
gctccgggatctcaaggcatgcagggccctatatctcaagggcctttgatgggacttaat
ccaagagggatgcagggtccaccaggacccagagataaccagggacctaatccacaaggg
atgatgatgggtcatccacaagaaatgagaggtcctcatatgcaaagtggtttgctagga
cacggtccccaggagatgcggggccttcagggacccccgcctcaaggttcaatgctggga
ccgccgcaagaaatgcgtgggccacccggtcctcagggccagcagggacctccacaaggc
tctttggtggggcctcaaggaaacatgcaaggacctcagggacagccaaacccttcgagg
gggccgcacccttcccagggccccctgcccttccagcagcagaaaacgcctctgttgggt
gatgggcctcgcccccccttcaatcaggatggacagaacccgggtcctcctcctctgata
ccaggcctggggcagcaaggaggacaaggtcgtctgggccctcacaaccagggacctggt
cttaataaaggcgatgcccgagggccacccaaccatcacctgggcccgctgtcggacagg
cggcacgagcagaacagcggcggccccgagcacgggccagagaggggcctgttccgaggg
gggcaggactggagcgatggcagggacagcaggggcatgcccgacaggcggggacctcac
cctgacttccacgatgacttcgagcggcccgacgacttccgcgatgatttccacccagac
aagagatttggccatcggttacgggagttcgaggggagaggaggcccaccactgcaagag
gagaaatggaggcgagggggacctgggcctccctttcctcctgaccacagggaatttgaa
ggaggtggttccaaccggggccctcctggtgcttgggaaggacggagaccttcagatgac
agatatccacgggatcccgaggatgcgcgcttccgaggaaggcgagatgagagcttccga
agaggaggaccctcgagacacgagggccgggggcccaggggcagagatggttttcctggc
cctgaagattttgggccagatgatgcttttgactctccagaggagaactccagaggaagg
gaccatggtgctcgggggcgaggtcgaggtgctctgagaggagctcggaagggtttgctt
cctactccagacgagttcccacgctttgaaggagggaggaaaccagaatcctgggatgga
aacagagaaccaggtcctcgtccagatcaccctcctcatgatgggcactctccagccagc
agagaacgttcctcttcactccagggcatggacatggcctcactgccaccacggaaacgg
ccctggcacgacggaccgggaacctctgaccacagggacatggatgctccaggtgcacct
ccagaggagaggggcaaaggacgagcaaattcgggaccttcacagagagcgccaaaatct
gggaggtccagttctctagatggagaccaccacgatggattccacagggaggaagccttt
ggtggaggccctggggcaggcaataacccttctcgaggaggaaggagcagcagcaattgg
ggaagaggaaataacatgaactctggccagtcccggagaggaggatctcggggcggacga
ggccgatag

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