KEGG   Passer montanus (Eurasian tree sparrow): 120511254
Entry
120511254         CDS       T07277                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4 isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03020  RNA polymerase
pmoa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120511254 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120511254 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmoa03021]
    120511254 (POLR2D)
   03400 DNA repair and recombination proteins [BR:pmoa03400]
    120511254 (POLR2D)
Transcription machinery [BR:pmoa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120511254 (POLR2D)
DNA repair and recombination proteins [BR:pmoa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120511254 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom
Other DBs
NCBI-GeneID: 120511254
NCBI-ProteinID: XP_039583983
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGSDPRTADVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggcggtagcgacccgcggacggcagacgtggaggaggacgcctcgcagctc
gtcttccccaaagaatttgaaactgcagaaactctgctgaactccgaggtgcacatgctg
ctggagcaccgcaagcagcagaacgagagcgcggaggatgagcaggagctgtcagaagtc
ttcatgaaaaccttgaactacaccgcgcgcttcagccgcttcaaaaaccgcgaaaccatc
gccagcgtgcgcagcttactgctgcagaagaagctccataagtttgaactggcatgtttg
gctaacttgtgtcctgagacagccgaggaagcaaaagctctgattcctagcctggagggc
cggtttgaggatgaagaattgcagcagattctggacgacattcagactaaacgcagcttc
cagtactaa

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