Passer montanus (Eurasian tree sparrow): 120511452
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Entry
120511452 CDS
T07277
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03015
mRNA surveillance pathway
pmoa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120511452 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120511452 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120511452 (SYMPK)
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120511452 (SYMPK)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120511452 (SYMPK)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120511452 (SYMPK)
U7-dependent histone pre-mRNA processing factors
120511452 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
120511452
NCBI-ProteinID:
XP_039584458
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MGSGPPRHQEWDRDHPVIKYNVLWEEGKAALEQLLKFMVHPAISSINLTAALGSLATIAR
QRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNLKLHLLSVLRHPSSGDFQPQITTLL
VDLGTPQAEIARSMPSPREARKRPRDEPDAALKKMKIDVLWEEGKAALEQLLKFMVHPAI
SSINLTAALGSLATIARQRPMFMAEVIQAYETLHANLPLTLAMFLVSPGVPNLSLSLVAN
LPLTLAMFLVSPGVPNPSLSLVANLPLTLAMFLVSPGPVSPQVLISMVYLPEAMPASFQA
TYTPVESAGTEAQIKHLARLMATQMTAAGLGPGQGHPGRGPSEDPGLAGDTVPARVKILA
SLARVKILASLVTQFEVPLKGEVLSFILDDVRGRLDLAFAWLFQEYNAHLARGGAGGLER
YDECLIGLLAGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDEVGHRGIFTKVVL
EAPLITESALEVIRKYCEDEVTPGDTRRCHAEVPPGDDTWRYFGADKDTEVAAPWTEETI
KQCLYLYLALLPHNHKLIHELASVYTEAIADIKRTVLRVIEQPLRGMGMNSPELLLLVEN
CPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQAL
PKLIKLNPIVVKEVFNRLLGTQHGDGASAVSPLNPGELLIALHNIDSSKCDMKSIIKATN
LCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQALTMYPRLGGFVMNILSRLIMKQ
VWGPEIP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaggaccaccccgtcatcaagaatgggatcgggaccaccccgtcatcaagtac
aacgtgctgtgggaggagggcaaggcggcgctggagcagctgctcaagttcatggtgcac
ccggccatctccagcatcaacctgacggccgcgctcggctcgctggccaccatcgcccgc
cagcggcccatgttcatggccgaggtcatccaggcctacgagaccctccacgccaacctg
ccgcccacgctggccaagtcgcaggtgagcagcgtgcgcaagaacctgaagctgcacctg
ctgagcgtgctgcggcacccgtcctcgggcgacttccagccgcagatcaccacgctgctg
gtggacctgggcacgccgcaggccgagatcgcccgcagcatgcccagcccgcgcgaggcc
cgcaagcggccccgcgacgagcccgacgccgccctcaagaagatgaagatcgacgtgctg
tgggaggagggcaaggcggcgctggagcagctgctcaagttcatggtgcacccggccatc
tccagcatcaacctgacggccgcgctcggctcgctggccaccatcgcccgccagcggccc
atgttcatggccgaggtcatccaggcctacgagaccctccacgccaacctgcccctgaca
ctggccatgttcctggtgtccccaggtgtccctaacctgtccctgtccctcgtagccaac
ctgcccctgacactggccatgttcctggtgtccccaggtgtccctaacccgtccctgtcc
ctcgtagccaacctgcccctgacactggccatgttcctggtgtccccaggtcccgtgtcc
ccgcaggtgctgatcagcatggtgtacctgcccgaggccatgcccgcctccttccaggcc
acctacacgccggtggagtcggccggcaccgaggcgcagatcaagcacctggcgcggctc
atggccacgcagatgaccgcggccggcctggggccaggtcaggggcaccccggccggggc
ccgagtgaagatcctggcctcgctggtgacacagtcccagcccgagtgaagatcctggcc
tcgctggcccgagtgaagatcctggcctcgctggtgacgcagttcgaggtgcccctcaag
ggcgaggtgctgtccttcatcctggacgacgtgcggggccgcctggacctggccttcgcg
tggctcttccaggagtacaacgcgcacctggcgcgcggcggcgccggcggcctggagcgc
tacgacgagtgcctgatcgggctgctggccgggctgcaggagaaacccgaccagaaggac
gggatcttcaccaaggtggtgctggaggcgccgctgatcaccgagagcgccctggaggtg
atccgcaagtactgcgaggacgaggtgggacaccgggggatcttcaccaaggtggtgctg
gaggcgccgctgatcaccgagagcgccctggaggtgatccgcaagtactgcgaggacgag
gtgacaccaggagacacccggaggtgccacgcggaggtgccaccaggagatgacacatgg
aggtacttcggcgccgacaaggacaccgaggtggcggcgccctggaccgaggagaccatc
aagcagtgcctgtacctgtacctggccctgctgccccacaaccacaagctgatccacgag
ctcgcctccgtctacaccgaggccatcgccgacatcaagcgcacggtgctgcgcgtcatc
gagcagccgctccgcgggatggggatgaactccccggagctgctgctgctggtggagaac
tgccccaagggcgccgagacgctggtgacgcgctgcctgcacagcctgaccgacaaagtg
ccaccctcgcccgagctggtcaagcgcgtcagggacctgtaccacaagcggctgccggac
gttcgcttcctcatccccgtgctcaacggcctcgagaagaaagaggtgatccaggcgctg
cccaaactcatcaaactcaaccccatcgtggtcaaggaggtcttcaaccgcctgctgggg
acacagcacggtgacggcgcctcggccgtgtcccccctgaaccccggggagctcctgatc
gccctgcacaacatcgactcctccaagtgtgacatgaaatccatcatcaaagccaccaac
ctgtgcttcgcggagcggaacgtgtacacgtccgaggtgctggccgtggtgatgcagcag
ctgatggagcagagcccgctgcccatgctgctgatgcgcacggtcatccaggccctgacc
atgtacccgcgcctgggcggcttcgtcatgaacatcctgtcccgcctcatcatgaaacag
gtctggggccccgaaatcccctga
DBGET
integrated database retrieval system
