Passer montanus (Eurasian tree sparrow): 120511830 Help Entry 120511830         CDS       T07277                                  Symbol DDX3X Name (RefSeq) ATP-dependent RNA helicase DDX3X   KO K11594   ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] Organism pmoa  Passer montanus (Eurasian tree sparrow) Pathway pmoa04622   RIG-I-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:pmoa00001]  09150 Organismal Systems   09151 Immune system    04622 RIG-I-like receptor signaling pathway     120511830 (DDX3X)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pmoa03019]     120511830 (DDX3X)    03041 Spliceosome [BR:pmoa03041]     120511830 (DDX3X)    03036 Chromosome and associated proteins [BR:pmoa03036]     120511830 (DDX3X) Enzymes [BR:pmoa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      120511830 (DDX3X) Messenger RNA biogenesis [BR:pmoa03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      120511830 (DDX3X)    mRNA cycle factors     Common to processing body (P body) and stress granule      120511830 (DDX3X) Spliceosome [BR:pmoa03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA helicase-like proteins     120511830 (DDX3X) Chromosome and associated proteins [BR:pmoa03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     120511830 (DDX3X) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII Utp25_C Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  120511830 NCBI-ProteinID:  XP_039585328 LinkDB All DBs Position Unknown AA seq 653 aa AA seqDB search MSHVAVENALSLDQQFSGLDLNSSDSQSEGSSTSKGRYIPPHLRNREASKQGFDSGGWSS RRDKDAYSSFGARSDRDAKSSFFDRGTGSRGGRYEERGRGGDYDRSGFGRFDRGGGNSRW CDKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDM GEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGP GDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIG QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ DTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEPDK RSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQF RSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNE RNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSS GFGSSSSSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN NT seq 1962 nt NT seq  +upstreamnt  +downstreamnt atgagtcatgtggcggtggaaaatgccctcagtctagaccagcagttttctggtctagac ttgaattcctcagactctcagagtgaaggaagctctacaagcaaaggccgatacattcct cctcacttgcggaacagggaagcttcaaaacagggtttcgatagcggtggctggagctcc agacgggacaaggatgcctacagcagcttcggtgcgcgctccgaccgcgacgccaagtcc agcttcttcgaccgcgggaccggatccagaggagggagatacgaggagcgtggcagaggc ggggactacgaccgcagcggcttcggcagatttgaccgcggcggcgggaacagccgctgg tgtgacaaatcagatgaggatgactggtccaagcctctccccccaagtgaacgcctagaa caggaactcttttcaggaagcaatactggcattaactttgagaaatatgatgatattcct gttgaagcaacaggcagcaactgtcctccacatattgaaagtttcagtgatgttgacatg ggagaaattatcatgggaaacattgaactcacacgctacacccgtcctactccagtccag aaacatgcaatacctattattaaagaaaagagagacttaatggcctgtgctcagacaggg tctgggaaaacagctgcatttcttctaccaatactgagccagatatatgcagatggccct ggtgatgccttgagagcaatgaaggagaatgggaggtatgggcgccgtaagcaatatcca atctcactggtcttggctcccactagagaactggctgtgcagatctatgaggaagccaga aagtttgcataccgctccagagttcgcccctgcgttgtatatggtggtgcagacattggc cagcagatccgtgacttggaacgtggatgtcacttgcttgtagcaactccaggacgactg gttgatatgatggagagaggaaagattggactggatttctgcaagtacctagtccttgat gaagctgacagaatgcttgacatggggtttgaacctcaaattcgtcgaattgttgaacaa gatactatgccaccaaagggggttcgtcacaccatgatgttcagtgctactttccccaag gaaatccagatgcttgctcgtgacttccttgatgaatacatctttctggctgttggcaga gtaggttctacatctgagaacatcacacagaaagtggtatgggtggaagagccagacaaa cgatcgttcctgcttgacctgctaaatgccacaggtaaagattcgttgactctggtgttt gtggaaactaaaaagggagcagatgctctagaggacttcctgtaccacgaaggctatgcc tgtacaagtatccacggagatcgctcccagagggacagagaggaagcgctacaccagttc cgctctggcaagagccccattcttgttgccacagcagtagcagcaagaggactggatatc tcaaatgtaaagcatgtcataaactttgacctgcccagtgacattgaggagtacgtacat cgtattggccgtacaggccgtgtaggaaaccttggtcttgccacttcattcttcaatgag aggaacataaacattacaaaggacttgcttgatctccttgtggaggctaagcaagaagta ccatcttggctggagaacatggcctatgagcagcatcacaaaggaggaggcagccgtggg agatctaagagcagtcggttcagcggaggcttcggagccagggactaccggacgagcagc ggctttggcagcagcagctccagcagcagccggtcaaccagcagccgcagcggcgggagc ggcagcaggggcttcggaggtggtggttatggaggcttctacaacagtgatggatatgga ggaaactataactcccagggggtggactggtggggcaactga

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