Passer montanus (Eurasian tree sparrow): 120512519
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Entry
120512519 CDS
T07277
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03013
Nucleocytoplasmic transport
pmoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120512519 (UPF2)
03015 mRNA surveillance pathway
120512519 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120512519 (UPF2)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120512519 (UPF2)
mRNA cycle factors
P-body specific factors
120512519 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
120512519
NCBI-ProteinID:
XP_039586843
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPANMEEKESQLNNKEKEFSERRPVSTREKPKEDVKVGMKRETLKVPEDKKKKM
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEEAAQL
KEKEEAHQLHQEAWERHQARKELRNKNQNAPESRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKYSQNKDSSKDESRDSKDAKDNKEAAGNEDLELELENLDINDDALELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVKKKDQINIE
TKNKTVRFIGELAKFKMFSKNDTLQCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAVRQVQDLEREFLIKLGIVNDKDSKD
SITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatctcagttaaataat
aaagaaaaagaatttagtgaaaggcgaccagtgagcaccagggagaagccaaaagaagat
gtgaaggttggtatgaagagagagactttaaaggttcctgaagataaaaagaaaaaaatg
gaagaggataaaagaaagaaggaagacaaggagcggaagaaaaaagaagaggataaagta
aaggcagaggaggagcaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagaaaaaaagaaacaagaagaagaagctgctcaactg
aaggagaaggaggaagcacatcagctccatcaggaggcttgggaacgccatcaggcaaga
aaagagctccgcaacaaaaaccagaacgcaccggagagtcgtccggaggaaaacttcttc
agcagactggactccagtctgaagaagaacacggcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaggccaaactgaaaatatcagacgtgaactgc
gctgtgcacttgtgttccctctttcaccagcgatacgctgattttgctccttcgttactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattaccaag
ttaagaactgatctgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtttgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggaaggtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttaca
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
agacgcattctgcactccaaaggagagctgagtgaagatcgacacaagcagtatgaggaa
tttgcaatgtcctatcagaagctgttggcaaattcccagtctctggctgatcttctggat
gagaacatgcctgacctcccccaagagaagccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagaatatgacctggaggggggtatctgggaagat
gaagatgctagaaacttctatgagaatctcattgacttgaaggcttttgtgccagcaatt
ttgtttaaagataatgaaaaatattcccagaacaaggattccagcaaagatgaatcaaga
gattcaaaagatgccaaagataataaagaagcagctgggaatgaggatctggaattggag
ctggagaacctggatattaatgatgatgcactggagttggactgtggagatgaggcagaa
gatcttacaaagaagcttcttgatgagcaagaacaagaggatgaagaagccagtactgga
tctcatttaaaactcatagtagatgcttttcttcagcagcttccaaattgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaacaga
agaaaactggtccgagcacttttcatagttcctagacaaagattggatttgctaccattt
tatgcaagactggttgccacattgcatccctgtatgtctgatgtagcagaggatctctgt
tccatgctgagaggggatttcaggttccatgtaaaaaaaaaggaccagatcaacattgaa
acaaagaataaaactgtcagatttattggtgagcttgccaagtttaagatgttctccaaa
aatgatactctccagtgtttaaagatgcttctgtcagacttctctcatcaccacattgaa
atggcgtgtaccttgctggaaacctgtggaagattcctcttcagatcaccagaatctcac
ctaagaaccagcgttcttttggaacaaatgatgaggaaaaaacaagcaatgcatcttgat
gcacgctatgttacaatggtagaaaatgcctattactactgtaatccccctccagctgaa
aaaactgtgaagaaaaaacgtcctcctttgcaggaatatatccgtaagcttctttacaag
gatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttggcag
gatgcagaagttaaggactatgttatatgctgtatgatcaacatctggaatgtgaaatat
aatagtattcactgtgtagccaacctcttagcagggttggtcctttaccaggaagatgtg
ggaattcatgttgtggatggagtgctagaggatattcgactaggaatggaggttaatcaa
ccaaagttcaaccaacggcggatcagcagtgccaagtttttgggggagctttacaattat
cgaatggtggagtcagctgtaatatttagaactctgtattccttcacctcgtttggtgtg
aaccctgatggcagtcctagtccactggaccctccagaacatcttttcaggatcagactt
gtctgtactatcctcgatacctgtgggcaatattttgacagaggatccagcaagcgcaaa
cttgattgcttccttgtatattttcagcgctatgtgtggtggaaaaaaagtctggatgtt
tggacaaaagaccacccttttcctatagacatagactatatgatcagtgatacactggaa
ctgctgagaccaaagataaagctctgcaattctctggaagaagctgtcagacaggttcaa
gacttggaacgagaattcttaataaaattgggaattgtgaatgacaaagattccaaggat
tccattacagaaggagagaatctggaagaggatgaagaagaggaggaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggctct
gacaatgaggaagaagagggtgaagaagaggaggaagagaacactgattatctcacggac
tccaataaggaaaatgaaactgatgaggagaatacagaagtaatgattaaaggaggagga
ctgaagcatgtcccttgtgcagaggatgaggacttcattcaggccttggataaaatgatg
ctggaaaatcttcagcaacggagtggtgaatctgttaaagtgcatcagctggatgttgct
attcctctgcatctcaaaagccagctgaagaagggccccccacttggaggtggggaagga
gagtcagagtctggggacacaatgccatttgtcatgttaacaagaaaaggcaacaagcag
cagtttaagatccttaatgtaccgatgtcttcccaacttgctgcaaaccattggaaccaa
cagcaagcagaacaggaggagagaatgaggatgaaaaagctcactctggatatcaatgaa
cggcaggaacaagaggactatcaggaaatgttgcagtctctggcacagcgtccagctcca
gcaaatactaatcgtgagcggcggcctcgttaccagcatccgaagggagcacctaatgca
gatctaatctttaaaaccggtgggaggagacgctga
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integrated database retrieval system
