Passer montanus (Eurasian tree sparrow): 120512588
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Entry
120512588 CDS
T07277
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120512588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120512588
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120512588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
120512588
NCBI-ProteinID:
XP_039586986
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASA
KLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQ
RRLQLGLDPAPPISTENKITVQQGRTGNAEKEVESNIIKTEFKTDFLALVGGRMKAGPPP
NRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQ
PPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLA
PPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSS
SHWEYSGSRRDRERERERERDRERDRDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYR
RSRDRSREREERHRERRHRDKDDGSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEA
SEDGAQEGEEQDTKE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcacgcccttcccagtggtgaggatgatgaggatgacagtgacagtgacagc
gatgacgatgatgtgaaggtcacaattggcaacatcaaaacgggagcgccctcctacatg
ggaactcctatgaatctaaacttaaaaacgggtagaggctatggagcatcagcttcagcc
aagttgcagcccaaaggtattgacttggatgccgcagggaatataaatggattgcctgtg
atagaagtggatttggattcatttgaagacaaaccgtggaggaaaccaggtgctgatctt
tctgattactttaattatggattcaatgaagaaacatggaaagcttattgtgaaaagcag
cggcggcttcagctggggctggaccctgctcctcccatcagcactgagaacaagatcacg
gttcagcagggaagaacaggaaatgctgaaaaagaagtggaaagcaacatcatcaaaaca
gagttcaaaacagacttcttggctctggtgggaggacgaatgaaggctgggcctcctccc
aacaggaagctgggtgggaccattgatgtgatcgggggccaggcaggcacaatccgcagg
gtggaagggagacgccgcgataaacacgcctcggaggagaaccccatccaggtcctggga
gaccatggcagtaagccccagcccccccagcagccccagcagccctcccagccccagcag
cctcctcagcagcagccgtttgctccaccagcagggcctccgcctcccccgctggccggg
cctcctcctccacacttcctgcaccctcctcctccagtgacttctgttccacctcccctg
catcctccaggcctgccacctccaggtccaattccagggctgttcccaccacctctggca
ccaccaccagctctcctcatcccaaccttggatgggcagccagccagctacaacaacagg
cagccacctccctttggctacaactctgcagattcaggtttcatcagctacccccccatc
tccacgtcccacacgccctgggtgaccacggtggacaagggcacgagcagctccagcagc
agccactgggagtactcgggctccaggcgggacagggagcgcgagcgcgagcgggagcgg
gacagggagcgcgaccgcgaccgggaccgcaccccgaccaccagcgaatacaacaatgac
gacgagcggtaccgctactacagccgcgagcgcagctacgacttcgagcgcgattaccgg
cgcagccgcgaccgcagccgcgagcgcgaggagcggcaccgcgagcgccgccaccgcgac
aaggacgacggcagcaaacacaaatcctcccgcaggaagcagcacgagagcgaggagggc
gagagccaccggcgccacaagcacaaaaagaacaagaggagcaaggaggagaaggaggcc
agcgaggacggcgcccaggagggcgaggagcaggacaccaaggagtga
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