Passer montanus (Eurasian tree sparrow): 120512623
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Entry
120512623 CDS
T07277
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120512623 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120512623 (ATRX)
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120512623 (ATRX)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120512623 (ATRX)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120512623 (ATRX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
120512623
NCBI-ProteinID:
XP_039587075
LinkDB
All DBs
Position
Unknown
AA seq
2505 aa
AA seq
DB search
MGGGGGGRRQEAGPLGLPPIRWRRRWRWRRPWLCLRPAPERGPGPGGRSAPSSGGGVMTA
EPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKSIGKSREPKGSPASMENNKDE
GSSSSERTKSLGSSRSKRKPTVVTKYVGSDDEQIADETVNEDISNENSENDVDMQSLPKG
TVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVNHFQ
KDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKK
CILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKMRVEN
EKSKIYDHTVKFSPKKNNANCNGEEKKIDNSYSGSLTYSYKALMVPKDLLKKTKKLIETT
TNLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLNDMKKAHLSLEEGLNLEIQALNVK
IKDKNTKEKKTEVRSEKNEVKKDEGKEHVALKEDDTTQTQKKVVSEQPDNEPMDQSVPSV
EQTDNKAAPGEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQMPS
DEQDSGNTAADHETPNSNTKVNAPVKDTKGGTKLKSSAKGTKELIVKLTPVSLSESTVKG
EGQDNSLEKESKDVDASKDADASKDIDESKGVDASQAGAANSDSGKQNHSAGSEPSTEND
AAPVEDSDLRRSPRVKTTPLRRPTDISPLTSNSEEDSNDTSNEKQKRKASKQPRRKSDKR
NTSDSAADGPSPNKLSKSKKPYDLDHSSDSDEVPAVLKEAGMMSRSSSDSESNSEAPAKN
QKTSDFQKSQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNYSDSSNYDSD
LEKEIQMLSKIEAAKKSKKKFSRKDDSYDSSDEEQRKKVSSKRKLNLKKKRGKSSEEEDD
GEKSSPEKEMNHSSKDKKTGKRSAAKDKLSRDSKEKSAKGKRDESSDAEKSSLEKEESPE
VKKKKDLKKKKAQDDDSSSESTEKSEKKEHKLESSKDRLKNKKGSESKAKKSEKLKKKGF
KKEQDDSSSDLDKSSPEKGSSNSSENDKIKKEPVFTEKRKLRERVAKRVHIDLSSDTEKS
PQKEESSDDDAMQRKKRTETKEKRKISHKKKISKKEQNDSSSSDEESYEDSKKKVKRGSV
KESKKSNLKKKVAKKKVVVTSSSQSDKEENDDQNSTGDGSSDEQKIRPVTESLMLSADAG
FCQSSGDEGDALSRTIPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDTSSDEQPEE
GKKKPAKQPENTADDGEKEKEDKKSEKEEPNSESDSEEEETSKKPRYRHRLLRQKLTVSD
GESGEEKKVVKPKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSA
KKAEAEENQRSYKQKKKRRRIKVQEDSSSENENKSNSENEDNDDSKSPGKGRKKIRKIIK
DDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEET
KEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVV
SFLHTVLLCDKLDFRTGLVVCPLNTALNWLNEFEKWQEGLEDEEKLEVYELATVKRPQER
SYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILK
NEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQ
NGQCADSTPVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCK
LYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDED
SMDDFIASDSDETSMSLSSDDYAKKKKSKGKKVTKECSSSGSGSDNDVEVIKVWNSRSRG
GGEGNVEDLTNNPASTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFE
ILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKSDRDQPPIYKGEGKWFRNIDYYRL
DGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQ
SIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTE
LYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEEL
TEEERKAAWAEYEAEKKGMTMRFNMPTGTNTMPTNFNSQTYIPYNLGALSAMSNQQLEDL
INQGREKVVEATNSVAAARIQPLEDIISAIWKENLTLTESQVQALALNRQASQELDVKRR
EAIYNDVLGKQQMLIGCVQRILMNRRLQHQYNQQQQQQMSYQQAAMGHLMMPKPPNLIMN
PSSYPAIDVRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggcggaggaggacggcggcaggaggcaggtcccctcgggctccctccgata
agatggcggcggcgctggcgatggcggcggccgtggctttgtctgcgcccagcgcctgag
cgcggccccggcccgggcggccgctccgctccgagcagcggcggcggagtcatgaccgca
gagcccgtgagtgaaagcaagttgaatacattggtacagaaactccatgacttcttggct
cattcatcagaagaatctgaggacgcaaactctcctccagcattatctaaaaacaaaagt
ataggtaaaagtagagaacctaaaggaagtccagcatcaatggagaacaacaaggacgag
ggaagtagttcttcggaaagaaccaaatccttaggatcatcccgttccaaaaggaaacct
acagttgtaacaaaatatgttgggtcagacgatgaacaaatcgcagatgaaactgtaaat
gaagatatttcaaatgagaactcagagaatgatgtagatatgcaaagcttgcctaaaggt
acagtggttgtacagcctgagccagtgctgaatgaagacaaagatgattttaaagggcct
gaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaagcgtggagaa
gaaggactccatggaattgtgagctgtacagcttgtgggcagcaagtgaaccattttcaa
aaggattcaatctatagacaccctacactgaaagtgcttatttgtaagacttgctacaaa
tattacatgagcgatgacatcagtcgtgattcagatgggatggatgaacagtgtaggtgg
tgtgctgaaggtggaaatttgatttgctgtgacttttgccataacgccttctgtaaaaag
tgcattttgcgcaacctgggccgaaaagagctctcgactatcctggatgaaaataaccag
tggcactgctatatttgccatccagagcctttgttggacttggtcactgcttgtgacagt
gtctttgaaaatttagaacagttgcttcaacaaaacaaaaaaaagatgagagttgaaaat
gaaaaaagtaaaatatatgaccacacagtcaagttttctccaaagaaaaataatgcaaac
tgtaatggggaagaaaaaaaaatagataattcatattcaggttcactaacatattcttat
aaagcactaatggtgccaaaagacttgcttaagaaaacaaaaaaactgattgaaactaca
acaaatctgaattctagctttgtaagctttttgaaaaatgctgcagaaaatgtagaaata
agcccaactgtgcaactgtgccagctgaaagcttttaaatctgtgctgaatgacatgaaa
aaagctcatctgtcactagaagaaggcctgaacctggagattcaagcactgaatgttaaa
atcaaagataaaaataccaaagagaaaaaaacagaggttagatcagaaaaaaatgaggtg
aaaaaagatgaaggaaaggaacatgtggcattaaaagaggatgacaccacacagacacag
aaaaaagtcgtgtcggagcagcctgacaatgagcccatggatcaaagtgttccctcagtg
gagcagacagataacaaggcagctcctggggaggagaagaagtccggcagaaatgaagaa
ccgcagtatgagcccaacagtacagaggctttagacatggatatcgtgtccatcccctcg
tccgttcctgaagatatttttgagactctggaatctgcgatggagattcagatgccatca
gatgagcaggacagtgggaacacagcagcagatcacgagactccaaattcaaatacaaaa
gtgaacgctcctgtgaaagataccaaaggtggtaccaagctaaaatcgtcagctaaagga
acaaaagaactgattgtaaaattgactcctgtttccctttcagagtccacagttaaaggt
gaaggtcaagacaacagccttgaaaaggagagtaaagatgttgatgcatccaaagatgct
gatgcatccaaagacattgatgaatctaaaggtgttgatgcatctcaagctggggcagca
aactctgattctggaaaacagaaccacagtgctggcagcgagccctccacggagaacgac
gctgcgcccgtggaggactcggatctccggcggtcaccgcgggtcaagaccaccccactg
aggcgccccacggacatcagccccctgacatccaactcagaggaggacagcaatgacacg
agcaacgaaaaacagaagaggaaagcatccaagcaacccaggaggaaaagcgataaaaga
aatacttctgacagcgctgctgatggtcccagtcctaacaaactttccaaatccaaaaag
ccatatgacttagatcacagctcggactctgatgaggtgccagctgttcttaaagaagca
gggatgatgagtcgcagctcctcggacagtgagagcaacagtgaagcaccagcaaagaat
caaaagacttcagattttcaaaagagtcaaccagtaaaggatgaaaatgggaaacgaaaa
aggaagagttccagttccggttcagatttagatgctaaaagaggcaaatcagctaaaaat
gctgctgctgctaaaaagaaacgacaaaactactctgattcttcaaactatgattctgac
ttggaaaaagagatacaaatgttgagtaaaattgaggctgcaaagaaatcgaagaaaaaa
ttctcaagaaaagatgatagttatgattcctctgatgaagagcagaggaaaaaagtaagc
agcaagagaaagttaaatctgaagaagaagagaggtaaatcttctgaagaagaggatgat
ggtgagaagtcttctccagagaaggaaatgaatcactcttctaaagataaaaaaacaggt
aagaggtcagctgctaaggacaagttaagcagagactcaaaagaaaaatctgcaaaggga
aaacgtgatgagtcatctgatgctgagaaatcttcattggaaaaagaggagagtcctgaa
gttaagaaaaagaaggatttgaaaaagaaaaaggcacaggatgatgattcttcttctgag
agtactgagaaatcggaaaagaaagagcacaagttggagtcttcaaaagacagactcaag
aacaaaaaaggatcagaaagcaaagcaaagaaatctgaaaaattgaaaaagaaaggtttc
aagaaagaacaagatgattcctcttctgatcttgataagtcatctccagagaaaggaagt
agcaattcttctgaaaacgacaaaattaaaaaggaacccgtgtttacagaaaagagaaaa
ttgagagagagagtagctaaaagagtacacattgatttatcctctgatactgagaaatct
ccccagaaagaggagagttctgatgatgatgccatgcagcgtaaaaaacgaactgaaacg
aaagaaaagaggaaaataagccacaaaaagaagatttccaagaaagaacagaatgactca
tcctcttctgatgaggagtcttatgaagacagtaagaaaaaggttaagagaggatcagta
aaagaaagtaaaaagagcaacttaaaaaagaaagtggcaaaaaagaaggtggttgtcact
tcctcttcccagtctgataaggaggaaaacgatgatcagaattccacaggcgatggaagc
agcgacgagcagaagatcaggcccgtgactgaaagcttgatgctgtctgctgatgcagga
ttttgtcagtcatcaggagatgagggagatgctctatcaaggactatcccaatggaggag
gaggaagatgatgatgatgacgaccctgagaatagaattgccaagaaaatgcttttagaa
gaaatcaaagccaatctttcctctgatgaggatacgtcttcagatgagcagccggaggaa
ggaaagaagaaacctgcaaagcaacctgaaaacacagcagatgatggagagaaggaaaag
gaagacaagaagtcagaaaaggaagaacctaattctgagtcagattcagaggaggaagaa
acatccaagaagcccagatacagacacagactgctgaggcagaagctcactgtgagtgat
ggggagtctggagaagaaaagaaggtggtgaaaccaaaagacaaaaaagaaggggggaag
cgcagaaatagaaggaaagtgagcagtgatgactccaatgactctgagttccacgagtct
gcagtgagtgaggaggtcagtgagtctgaggatgaccaaaggccaaggacaagatctgcc
aaaaaagctgaggcagaggaaaaccagcgcagctacaaacagaaaaagaaacgaaggagg
ataaaggttcaggaggattcatccagtgaaaatgagaataagagtaactctgagaatgag
gacaatgatgactccaaatctcctggaaaaggcaggaagaagatcaggaaaattattaaa
gatgataagcttagaacagaaacacaaaatgcacttaaagaagaagaagaaagaagaaaa
cgtatagcagagagagaacgggagagagagaaattgagagaggtgatagagattgaggat
gcctcacctctgaagtgtcccatcacaaccaagctggttttagatgaagatgaagaaacc
aaagaacctttagtgcaggtccacaggagtatagtgaccagactgaaaccacaccaagta
gatggtgttcagttcatgtgggattgctgctgtgaatctgtaaaaaaaaccaagacatct
cctggctctggctgcattcttgctcactgtatgggcctgggaaaaacattacaggtagta
agttttctccacacagtcttgctatgtgacaaactggattttcggacaggcctggtcgtg
tgtccactcaacactgccttgaactggctgaatgagtttgaaaaatggcaagaaggttta
gaagatgaggagaaactagaggtctatgagctggcaactgtgaagaggcctcaggagagg
agctacatgctgcagcactggcaggatgagggaggggtgatgatcattggctacgagatg
tatcgaaacctggctcaaggcaggaatgtgaagagtagaaaacttaaagaaatatttaac
aaagctttagtcgacccaggtcctgacttcgtggtgtgtgatgaaggacacatattgaaa
aatgaagcatctgctgtctccaaggcaatgaattctattaaatctaggagaagaataatt
ctgacaggaacaccactgcagaataatcttatagaatatcactgcatggttaacttcatc
aaggagaacttgcttggctcaattaaggagttccggaatcggttcatcaaccccatccag
aacgggcagtgtgcagactccacccccgtggatgtcagggtgatgaagaaaagggctcac
atcctctatgagatgctggctggctgtgttcagaggaaggattacacagcactaaccaag
ttcctgccccccaaatatgagtacgtgctcgaggtgaggatgacccccatccagtgcaag
ctgtaccagtattacctggaccatctcacaggtgtaggtggtggcaatgaaggtggaaga
ggcaaagctggagctaaactattccaggatttccagatgttgagcagaatctggactcac
ccttggtgtttgcagctggactatattagtaaagaaaataagggctattttgatgaagac
agcatggatgacttcatagcttcagattctgatgaaacttccatgagcttaagttcagat
gattatgcaaagaaaaaaaaatccaaggggaaaaaggtgacaaaagaatgtagctcgagt
ggcagtggcagtgataatgatgttgaagtcattaaagtctggaattcaagatctcgtgga
ggtggggaagggaatgtagaagatcttacaaacaacccagcatcaacaaagtcagatgaa
ggcaaagctacatcctcttccaatcctggtagcccagctccagactggtacaaagatttt
gtcactgatgcagatgctgaggtgttggaacattctgggaagatggtgctgctctttgaa
atcctccgaatggcagaggagctgggagacaaagtcctagtgttcagccagtccctgata
tctctggatttgatagaagatttcctggagctggctaacagggagaaatctgacagagat
cagcctcctatctacaaaggtgaaggaaaatggttcagaaatattgattattatcgcttg
gatggctcaaccacagctcagtccagaaagaaatgggctgaggagtttaatgatgaaact
aatgtgagaggccgcttgttcatcatatccaccaaagcaggttccctgggaataaacctg
gtggctgctaacagagtcatcatctttgatgcctcctggaacccctcctatgacatccag
agcatcttcagggtgtatcgcttcgggcagaacaagcctgtgtttgtgtacaggtttttg
gctcagggaaccatggaggacaagatctacgaccggcaggtgacgaagcagtcgctgtcc
ttcagggtggtggaccagcagcaggtggagaggcacttcaccatgaacgagctcactgag
ctctacaccttcgagccagacctgctggatgaccccaactccgagaagaagaagaagagg
gacacccccatgctgccaaaagacacgatcctggcagagctgctccagatcaacaaggag
tacatagttgggtaccacgaacatgattcactcctggaccacaaggaggaagaggagctc
actgaagaagagaggaaggcagcctgggcagaatatgaagcagaaaagaagggcatgacc
atgcgcttcaacatgcccacagggaccaacacaatgcccacaaatttcaactctcagaca
tatattccttacaatttgggtgctctgtcagcaatgagcaaccaacagctggaggacctc
attaaccaaggaagagagaaggtggtggaagcaaccaacagtgtggctgcagcaagaatc
cagccccttgaagacatcatttcagccatatggaaagaaaacttaaccctgacggagagc
caggtgcaggccctggccctgaacagacaggcgagccaggagctggacgtgaagcgccga
gaagccatttacaacgacgtcctcgggaaacagcagatgctaatcggttgtgtccagagg
atcctgatgaacaggcggctccagcaccagtacaaccagcagcagcagcagcagatgtcc
taccagcaagcagccatgggccacctcatgatgccaaagcctccaaatttaatcatgaat
ccttccagctacccagccatagatgtgagaggaatgtatcagtcagtgtctggtgggatg
cagccaccacccctacaacgagcaccacccccaatgagaggcaaaaatccagggccttcc
caagggaaatcaatgtga
DBGET
integrated database retrieval system
