Passer montanus (Eurasian tree sparrow): 120512887
Help
Entry
120512887 CDS
T07277
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmoa01002
]
120512887 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoa04121
]
120512887 (USP42)
Enzymes [BR:
pmoa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120512887 (USP42)
Peptidases and inhibitors [BR:
pmoa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120512887 (USP42)
Ubiquitin system [BR:
pmoa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120512887 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120512887
NCBI-ProteinID:
XP_039587608
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGASSKQAAFMGPRLPPHMIKSSSRLNGNGPLKEDPSTVGVAVKRPSS
APPTACVQNWAISRPSMADPSKTQKITISIHNKLPPRQAVPQAECLSSAVEEEDLKPLPS
ATITNSSAAEPTSNLSTVSVATNVSKQEVPDEIFVEPAVNGNPKLCADNVVPYGAEPSGK
SEESKGLFKRHCNVISSNGILIGKVVRTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPIKPSEIFFSKANGVLEAMPKALSPDPQGILDSLTYSQLNSL
SEEKSVSGSQKSSDSDGVTDTVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDSEGEFLGQCESEDIRDKDKLRRSKEPELISK
ENPLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDITDKCQDTKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGLSNKICEDDDKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRNKPDDHSHRRRSSHSMETNRQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRERYYQDEPRRWDKCRYYNDYYSSHGTRDGR
ERRSSHCDKDYDKLSQAYSRSHKDYHCKSRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYSRERHALPPVSAHSNFEDSSRDSEKEKLRNGKRKYSHQEESGSDIEKKCRKTDDQ
RIKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLE
YLDPRFQKKTWEKKEESHPPDDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMASTEYA
RDVELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacggtct
gacaaatctatgaaaccccgtactaaaaaaatgacgtctcgcactgcaagtttgggccgg
gtacctcctacagaagatccaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcaa
caaacacaaagtgttggagttgggctgcagaacctcggcaacacttgtttccttaattct
actctccagtgtttgacctacacgcctcctcttgccaattacatgctttcacttgagcac
accaagtcatgtcacgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgccatcaaacctacgtctgttatcaatggccttaaa
agaataggaaaacatttccactttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaaattagacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcagtgtcggatacatacgagccatttctcgacgttactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttccagcatcaaagagatac
acaatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatctattggagagcccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcatcaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctacgacctgacgctgggggagcgcgccttctacctg
cccgcgccctcctacccgcgctccttcctgggccagcgcggcgccagcagcaagcaggct
gccttcatgggaccacggctgcctccccacatgatcaagagttcaagtcgtttaaatgga
aatggacccttaaaagaggatcccagtactgttggtgttgctgtaaaaaggccgtcttca
gctccaccaacagcctgtgttcaaaactgggcgatttccaggccttcaatggcagaccct
tccaaaacgcagaagatcacgatcagtattcacaacaagctgcccccacggcaggcggtg
ccgcaggcggagtgtctgagcagcgctgtggaggaggaggatctgaagccccttccttca
gccacaattacaaactcttctgcagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgagatctttgttgagccagcagtgaat
ggaaaccctaagctctgtgctgataacgtggttccttacggtgcagagccttcaggaaaa
tccgaggagtcaaagggcttgttcaaaaggcattgcaacgtcatttcttccaatggaatt
ctgattgggaaggtggtccgtacattgcataattcccattcatcctgtcagaatgctgaa
gagagatcccagcatgagctgccaaaaattgattccctaaatggtgctattagtttagat
aatgaatataaagaaaacggactgaaacttgatgattccacttgccaagtccaacccatt
aaaccttctgagattttcttctctaaagcaaatggagtgcttgaagcgatgcctaaagct
ttgtcaccagatcctcaaggtatcttagactctcttacgtacagccagttgaacagcttg
tcagaagaaaagagtgtctctggatctcagaaatcttctgacagtgatggagttacagat
actgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaaccatttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatagtgaaggtgaattccttgggcagtgtgagtct
gaagacatcagagataaggacaaactaagaagatcaaaagaacctgaactcatttcaaaa
gaaaatcctttgtacatcaaaggatctcctgagagcaaagagaaattagggcaaatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagat
aaatgccaagatacaaaggacatttctaataactatgtagaggtaccacccgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagatgaggga
ctgagtaataaaatatgtgaagatgatgataaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaaggactgacaaagagcactaccggaggaagagagaaaactcggacacg
gaggagaaggagaggcaaaccagaaacaaaccagatgatcattcccacaggaggaggagc
tctcacagcatggaaacaaacaggcaaagccgtcacaagcaggagtattgcagcgagagc
aagtacagatcctcccacaacgagagaaacagtcccagtaatggcaggagctcaggaaaa
tattctcgttacagatcccgaagcagagaaaggacagatccagacaggaataggtattat
tattccaaaggagacagaccttggattagagaaagatactatcaagatgaaccacggaga
tgggataaatgcaggtactacaatgattattattcctcccatggaacaagggatggtagg
gagaggaggtcctctcattgtgataaagactatgacaaattgagccaagcttacagcagg
tcacacaaggattatcactgcaaaagcagatgggctcacagcacactctcccgagaggag
gatgtgcatcacttcagcagccacagagcaaacttccaccactgttcagtacctcagcag
cactcggaaaaatattcccgcgaaaggcacgcgcttcccccagtgtcagctcactcaaac
tttgaggactcttcccgggacagcgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaatgcagaaagacagatgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaactgaaagacttattggaa
tatttagatcctcgtttccagaagaaaacatgggagaagaaggaagaatcccatcctcca
gatgaccatttatgtgagcaatacagaaaccagggcagtaagcaaccctacaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcatccactgagtatgcc
agagatgtggagctgactgatgaaagccttcaatactcagactga
DBGET
integrated database retrieval system
