Passer montanus (Eurasian tree sparrow): 120512998
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Entry
120512998 CDS
T07277
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120512998 (RAI1)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120512998 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
120512998
NCBI-ProteinID:
XP_039587837
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTVALAGGRPYHEPAATSLPFRTHFQQQPQQQQQQQQQQQQPPALPYPK
LQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPL
ERPLGSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPQPPQPPQPPQPPQPM
QGRHHASETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGR
SPSYSSTPSPLMPNLENFQYSQQPLNAGAFPAGIADHSHFMPLLNPSPTDGTSPDTQSGN
CKNMQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGIKTPARTPE
QLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLYCNQN
RSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVSNERDCPR
LLLSALSQEELASEIIVLQDAISEKADKAWANLPMLGKETTKSPFQMENHRPSLDSMVKG
AWPSQGDSSTLTEPLKLDKASGASTGKDFNEEVYEGPQVEFTATESKDVLKDTAPLAFNS
KPSMPAATSSTGATGYSCYSNTTANSVASENAMEHFEWPEESLGEACLRWKDLQATDLPK
GLFPSKLVSSCKEKKNACGLDLCDGEQPAKSEPVQDFGQQVMEEEEETLTYDEATKADSE
RWLQDTRHCCSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASSPKPP
EMPAVLSSSEVPVSAEETVSTVEKESSAPTPRLSGQSVILLGPAVGTETKVKSWFKSSLP
HIQPEEENGGGETSHLEAADAESASSVMVKQQLTPENVLGKMEPVSRGKSLRNKRVHCRL
PEGDGPGSTVLSPFDELPAASSVAGACLGPDGQTEVPSKSAQSQTPRFPAEGLPARMCTR
SFTALAEPRAPAPLEGLKAPAHQEKLGKKPGCGVKQRVAFKTRKRNSRPAPRVVQNTGDA
TLLVPGLVAAEEVAGPTPLEGDAVEAGERDQRSMILRSRTKTQEVFYTKRQRGKRAAEVR
LKNCKAPKKLISNNHLPPAFKLPAPGSPHKEGKVGARMKLPKAGPGVGGKMSERPLHSLK
RKSTFISPIPTKKRNLVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKAKLPPKSSGEAIP
KPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFTCKPA
ATAVAATVAAYGSSLSPAGAERERVVKHSGVAVAVGDARLPKLGAAQKVPTMPVAEPLCR
NPNGRAPKGKPGGGKKLPHDGCQGEACGSTPGTQSSPNMVAKNLGLLPKKRNRKGKAAAL
GMAKAPLSPALPAPLPRERVAGPGGAEEAPREKKPKTEEKEAGSSDGPPEGRSAAGPARG
PKPRANHSNYNGYSKRQRKRLGHGKAKAVPARCKSRGKRRRQPQQAPLLHPAEPEIRLKY
ISCKRLRADSRAPPFAPYVRVERRGDFTTTCTVVNSPGDEARLQRGPAGPAPRPRAALPA
SSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARAE
GPGEESGVPATAERAPRGTEGGCGGKAARPEGAAEAAKQSSLRSSPRGMFRRLQSCYCCD
ERTEGEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEA
VKAAADLKCSSCQQAGATVGCCQKGCPHTYHYACAIDTGCLLTEESFSLRCPKHKRQPV
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccgtacgcgggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcagggcagcag
ctgcagggcaggccggccttttccaattacaccgtgcaggagaacagcccttatccggcc
cggtattccggggacgagagcctgcaggcgtggggaggccagccacaggcactgcccggc
ggcgtggccaagtatgaggacaacctgatgaagaagacagtggcgttggcgggtgggcgg
ccgtaccatgagccggcagccacctcgctgcccttccggactcacttccagcagcagccg
cagcagcagcagcagcagcaacagcagcagcagcagccgcccgcactcccctaccccaag
ctgcagcggcagaaactgcccaacgatgtctcctcacccatgcccttctcacagagccct
cacttcgggcagcactcccagtccttccctgcctcctccacctactcctcggtgccgggg
ggcagccagccggcacactcctacaagagctgcacggcgccctcggggcagccgccgctg
gagcggcccctgggtagcgctgccagcctggcccccggcccccgtgtgcccaacctgcac
ggctaccagcccaaccgcattggctacgagcagcccccacagccaccaccacagcccccc
cagccgccgccaccacagcccccgcagccaccgcagcccccgcagcccccacagcccatg
caggggcggcatcacgcctcagagaccctccactaccaaaacctggccaagtaccaacat
tacaaccagccaggccagacctactgccagggcgatgcgccgcccgtccggacgccggag
cagtactaccagaccttcagccccagcgccagccactcgccggctcgctccgtcggcagg
tccccctcctacagctccactccctcccctctgatgcccaacctggagaacttccaatac
agccagcagcccctgaatgctggtgccttcccggccggcattgctgaccacagccatttc
atgccgctgctgaacccttctcccactgacgggacgagccccgacactcagtctgggaac
tgcaaaaacatgcagaaggagaagctgcctgaaaacctgctgtcagacctgagcctgcag
agcctgacggcactcacctcccaggtggagaacatctccaacactgtccagcagctgctg
ctctccaaagcagctgtgccccagaaaaagggcatcaagaccccagcgagaacccctgag
cagctcaaggggcagcactgcagtcctgagagcagcacctactcggcagagcaggtgggg
acccccctgtccgacccactgagcaccccccagtctgtgcacgctgagacacaggacact
gactatctcagtgggtcagaggaccagctggagaggagtttcctgtactgcaaccagaac
cgcagccctgcccgcgtcaacagcaactccaaggcaaagcctgagtcggtgtccacctgc
tctgtgacctccccagacgacatgtccaccaaatcagatgactctttccagagtatccac
gccaccctgcccctggagaccttcaccaagtatgtgagcaatgaacgggactgcccccga
ctgctcctcagcgccctgtcccaggaggagctggcttctgagatcatcgtcctgcaggat
gccatcagcgagaaggcagacaaagcctgggccaacttgcccatgctgggcaaggagacc
accaagtcccccttccagatggagaaccaccggcccagcctggactccatggtgaaaggt
gcctggcccagccagggtgactccagcacgctcaccgagcccctcaagctggacaaagct
tcgggggccagcacagggaaggactttaatgaggaggtgtacgagggtccccaggtggag
ttcacagccaccgaaagcaaggatgtgctgaaggacactgccccactggccttcaactcc
aagcccagcatgccggcagcgacgtcaagcacgggagccactggctacagctgctactca
aacaccaccgccaactcggtggcgtctgagaatgccatggagcattttgagtggccagag
gagagcctgggtgaggcctgcctgcggtggaaggatctccaggccactgacctccccaag
ggcttgttccccagcaaactggtgagctcctgcaaggagaaaaaaaacgcctgcggcttg
gacctgtgtgatggagagcagccagccaagagtgagccggtccaggactttggccagcag
gtgatggaggaggaggaggagacactgacctacgatgaagcaacaaaggcagacagcgag
aggtggctgcaggacacccggcactgctgctcagctggggactttagtgagatccccatc
atctcctcgccggatctgaaggagtcagacctggaggcagaggagtactcctcactctgt
gagctggctggctcggagcagaagtcagtgacatacgatgcctcatcacccaagcccccg
gagatgccggccgtgctgtcctccagtgaggtgcctgtgtctgccgaggagaccgtcagc
acagtggagaaggagagctcagctcccaccccacgcctctctggccagtctgtcatcctg
ctgggccctgctgtgggcacggagaccaaggtgaaaagctggttcaaatcctccctgccc
cacatccagcctgaggaggagaacggtggaggggagacatcccacctggaggcggccgat
gctgaatccgcctcatcggtcatggtgaagcagcaactcacgcccgaaaacgtgctgggg
aagatggagcctgtctcacggggcaagagcctccgcaacaagagggtccactgccggctg
ccggagggggatggccctggcagcaccgtgctgagtcccttcgatgagctgccagcagcc
agcagcgtggccggcgcctgcctggggccagacggacagacggaggtaccgagcaagagc
gcccagagccaaacaccccggtttccagccgaggggctgccggcacgcatgtgcacccgc
tccttcaccgccctggccgagccccgcgcccctgccccgctggagggactgaaggccccc
gcgcaccaggagaagctggggaagaagcccggctgcggcgtgaagcagcgggtggctttc
aaaaccaggaagcgcaacagccggccggcccccagggtggtccaaaacaccggcgatgcc
accctcctggtgcccggcttggtggcggcggaggaggtggcagggccgacaccgctggag
ggggacgcggtggaagccggggagagggaccagcggtcgatgatcctccgctcgcgcacg
aagacacaggaggttttctacaccaagcggcagaggggcaagcgggcagctgaagtccgg
ctgaagaactgcaaggcgcccaaaaagctcatatccaacaaccacctcccacctgccttc
aagctgccagcgccaggcagcccccacaaggagggcaaggtgggtgcgcggatgaagctg
cccaaagcagggccgggcgtgggcggcaagatgtcggagcggccgctgcactcactgaag
aggaagtccaccttcatctcccccatccccaccaagaagaggaacctggtcctgcggagc
aacagcggtggcgtgaaggaggagaagccagagggtccccccagcctcttcaaaaaaatg
ccggtggccaagaaggtgaaagccaagctgccccccaagagctctggcgaagccatcccg
aagccccccctgccaaaggaggcccccgatgtctgcatcaagatcacctcccgggcggcc
ttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgcggcctcaagctg
gaggccattgtccagaagatcacctcacccaacctgaagaagttcacctgcaaaccagca
gccacagcagtggcagccacagtcgctgcctatggctcctccctgagcccggctggggca
gagcgggagcgggtagtgaagcacagtggggtggctgtggcagtgggcgatgcgaggctg
cccaagctgggggcagcacagaaggtgcccacgatgccggtggctgagccgctctgccgg
aaccccaatggccgagcaccaaaggggaagccgggtggtgggaagaagctgccccatgac
ggctgccagggggaggcttgtgggtcaacgccagggacccagtccagccccaacatggtg
gccaagaacctggggctcctccccaagaagaggaaccgcaagggcaaagcagcagcgctg
ggcatggccaaggcgcccctgagccctgcactgcctgcaccgctgccccgggagcgtgta
gccggcccgggtggtgcggaggaggcgcctcgggagaaaaaaccaaagactgaggagaag
gaggcagggagcagcgacggccctcctgagggacgctcggccgccgggccggcgcggggc
ccgaagccgcgggccaaccactccaactacaacggctactccaagcggcagcggaagcgt
ctgggccatggcaaggccaaggcggtgccggcgcggtgcaagagccgcgggaagcggcgg
cggcagccccagcaggccccgctgctgcaccccgccgagcccgagatccggctcaagtac
atctcctgcaagcggctgcgggcggacagccgcgccccgcctttcgctccctacgtgcgc
gtggagcggcgcggagacttcaccaccacctgcaccgtcgtcaactcgcccggcgacgag
gcgcggctgcagcggggaccggccgggccggcgccgcggccgcgggcggccctgcccgcc
tcctccaccatgcacatgggcccggtggtgtcgaaggcgctgagcgccgcgtgcctggtc
tgctgcctctgccgcaaccccgccaactacaaggacctgggggacctctgcgggccctac
taccccgaggactgcctgcccaagaagaaatcgcggctgaaggagaaggcgcgggcagag
gggccgggcgaggagtccggcgtgcccgccacggccgagcgggcgccccgcgggactgag
ggcggctgcggcggcaaggcggcgcggcctgagggggccgccgaggcggccaagcagagc
tcgctgcgctccagcccgcggggcatgttccgtcggctgcagagctgctactgctgtgac
gagaggacagagggcgaggaggcggccgaaaagccccggcggcacgaatgtcacaaggcc
gagtcgccgccgcaggagccggcaggcgacacgcaggagcactggctgcacgaggcctgt
gccgtatggaccgctggggttttcctggtggcgggcaagctctatgggctgcaggaggct
gtcaaggcggctgccgacctgaagtgctcgagctgccagcaagcaggagccaccgtgggc
tgctgccagaaggggtgtccccacacctaccactacgcatgtgccatcgacacaggctgc
ttattaactgaggagagcttctctctgagatgtcccaaacataagaggcagccggtgtag
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