Passer montanus (Eurasian tree sparrow): 120513130
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Entry
120513130 CDS
T07277
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04010
MAPK signaling pathway
pmoa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120513130 (CACNA1H)
04020 Calcium signaling pathway
120513130 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmoa04040
]
120513130 (CACNA1H)
Ion channels [BR:
pmoa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120513130 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
120513130
NCBI-ProteinID:
XP_039588171
LinkDB
All DBs
Position
Unknown
AA seq
2282 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRPDEAEE
NPFICSSHRENGMQRCSNIPSRKESKVECTLSMESYSPSLASPEPSRNSCINWNQYYNIC
MAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGS
FFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHI
FRKVKRRTIRLYNNWQSKRRKKVNPNSSGGGGGGQSQRSRRRITSIHHLIHHHHHHHHHH
YHISNGSPRGPRANPEICELELQVMKPGRQLMLPPPASPRPPGPAVHSIYHADCHVEGPP
GGCRATGSTVGSKLAGLGGHGGMNYPTILPSPGGKGGSAALPKGKKNGSSPAPVGNSPGS
LGLDSYGKLQQLVGEHGLRRTPSRLSGLSAAGALPSPGGPGLSCELQDCPFCASLLDDPE
FALSDSDSNGDSDSNGVYEFTQDLRHGDHRDQLQQQRGRRRRKKKKAKERNKVVKLWKAF
GTKLKRIVDSKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLL
KLLAFGIFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALR
RQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLW
AIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEG
DANRSDTDEDKTSANFEDEFEKLKDFRATEMKMYSLAVTPNGHLEGRGAVPPPIIMRTAA
TPMPTPKCSPHLDSLHALGDSRRGSNASLDPTGYDQKSLSSLRSSPCANWATSSTWGSRR
SSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTPSRPSPPRRAESLDRR
GSQELPELLRVPSVRQLGLGPAALLPAELRGCNGKMGHGAAEFFLRVDAHKEDALDYEDD
AEDSYCYRIRKALEPYKPQWCKTHENWSLYVFSPQNRFRVMCQKVIAHKMFDHVVLVFIF
LNCITIALERPDIDPLSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWN
VLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLIS
SLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKADCTNAHYKWVRRKY
NFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFF
VLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYS
PARRYIHSLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEA
LLKLVAFGFRRFFKDRWNQLDMAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIAR
VLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEG
LSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFV
LIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGSRSGAVAGESRALHGNL
EHSKGKQQGLGSAASLRAQDSQNLLAVRKISVSRMHSLPNDSYMFRPVTPATAPLPLHEV
EMETYPCKAPRGSITSIRSQPVVGSSSLRVPTEAVRCPGHDGRHRWKGLGPHGCPRSPAL
SKLLCRQEAVRTDSVDGQTAEHKDSVQAEPGEPQPSAKQPQSTLTPSPLPASPPRSPPSS
PHRPLGALARKHTCGQHGVASRPPSPGSPPSPEGCQGEPSDLADEEVRHINSSAKDWAEE
HSDPGSRSTSPFPSPAPSPVPLKNCSTSSLSRREKDLKKFYSTDAKGFLSKPSWADEQRR
HSIEICPSGGFQEPAEDTQRPPGHVQPEADYIHGARRKKKMSPPCISIDPPMEDEGAPRA
KPSENTLLRRRTPSCEFPAYRESLELPESRGEHLSIPNFSFEQLDGGSLSSLSELLDSGQ
STPASADSRPDAEQKKQDHLKTQRGDGKERGKELPGTAKSPLHKQDLGPVTVATEEGTDD
PV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgcgtcaccctgggcatgttccagccctgcgaggacgtg
gagtgccagtcggagcgctgcaccatcctggaggcgtttgatgacttcattttcgccttc
tttgccgtggaaatggtcatcaagatggtggccctgggcatcttcgggcagaagtgttac
cttggggacacctggaaccgcctggacttcttcatcgtcatggcagggatgatggaatat
tccctggatggccacaacgtcagcctctccgccatccgcaccgtgcgcgtcctgcggccg
ctgcgggccatcaacagggtcccaagtatgaggatcctggtcacgctgctgctggacact
ctgcctatgttaggcaacgtcctcctcctctgcttcttcgtcttcttcatctttgggatc
gtcggggtccagctctgggcagggctgctgaggaacaggtgcttcctagacaggaatttt
gccatgacatacaacctgaccttcctccacccctactaccggccggacgaggcggaggag
aaccccttcatctgctcctcgcaccgcgagaacggcatgcagaggtgctccaacatcccc
agcaggaaggagtccaaggtggagtgcaccctgagcatggagtcctacagccccagcctg
gccagccccgagcccagcaggaactcctgcatcaactggaaccagtactacaacatctgc
atggccggggacgtcaacccccacaacggggccatcaattttgataatattggatatgcc
tggattgctatttttcaggtgataaccctggaaggatgggtggacatcatgtattacgtg
atggatgcacactctttttacaattttatatattttatattgcttatcatagttggctcc
ttcttcatgatcaacctgtgcctggtggtgatcgccacccaattttcggagaccaagcag
cgggagaaccagctgatgcaggagcagcgggcgcgctacctgtccaacgacagcaccatc
gccagcttctcggagccgggcagctgctacgaggagctgctcaagtacatctgccacatc
ttcaggaaggtgaagagaaggaccatccgcctctacaacaactggcagagcaaacgccgg
aaaaaagtcaaccccaacagcagcggcggcggcggcggcgggcagagccagcggagcagg
aggaggatcacctccatccaccacctgatccaccaccaccaccaccaccaccaccaccac
taccacatcagcaacgggagcccgcgggggcctcgcgccaaccccgagatctgcgagctg
gagctgcaggtgatgaagccgggccggcagctgatgctgcccccgcccgcctcgccccgg
ccgccgggccccgccgtgcacagcatctaccacgccgactgccacgtggaggggcctccc
ggcggctgcagggccaccggcagcactgtgggcagcaaactggccgggctgggcggccac
ggcggcatgaactaccccaccatcctgccctcccccggcggcaagggcggctcggcggcc
ctgcccaaagggaagaagaacgggagctctccggcgcccgtggggaacagcccgggcagt
ttgggcctggattcctacgggaagctgcagcagctggtgggagagcacggtctccgccgg
acgcccagccggctgtcggggctcagcgcggccggggctctgcccagccctggtggcccc
gggctgagctgcgagctgcaggactgtcccttctgtgccagcctcctggacgaccccgag
ttcgccctcagcgactccgacagcaacggcgactccgacagcaacggcgtctacgagttc
acgcaggacctgcggcacggcgaccaccgggaccagctgcagcagcagcgcggcaggagg
aggaggaagaagaagaaggccaaggagaggaacaaggtggtgaagctctggaaggcgttc
ggcaccaaactcaagaggatcgtggacagcaagtacttcaaccgcgggatcatgatcgcc
atcctcatcaacaccctcagcatgggcatcgagtaccacgagcagccagacgagctgacc
aacgccttggagatcagcaacatcgtcttcaccagcatgtttgccctggagatgctcctg
aagctcctggcctttgggatctttggctacatcaagaacccctacaacatctttgatggg
atcatcgtggtcatcagtgtctgggagatcattgggcagtcggacgggggcctgtccgtg
ctcaggacgttccggctgctccgcgtgctgaagctggtgcgcttcatgcccgccctgcgc
cgccagctcgtggtgctcatgaagaccatggacaacgtggccaccttctgcatgctgctc
atgctcttcatcttcatcttcagcatccttggcatgcatctttttgggtgcaagttcagc
ctgaaaaccgacacgggagacacggttccagacaggaagaattttgattccttactctgg
gccatcgtgaccgtgttccagatcctcacgcaggaggactggaacgtggtgctctacaac
gggatggcctccacctcctcctgggccgccctctacttcgtggccctgatgacctttggc
aattacgtcctcttcaacctgctggtggccatcctggtggaaggattccaggcagaggga
gatgccaacaggtcagacacagatgaggacaagacatctgccaacttcgaggacgagttt
gagaagctgaaagacttcagagcaacagagatgaagatgtactcgctggctgtcacccca
aacgggcacctggagggcaggggggccgtgcccccgcccatcatcatgcgcacggcggcc
acccccatgcccaccccgaagtgctccccacacctggactccctgcacgccctcggggac
tcgaggagaggcagcaacgcctcgctggaccccacgggctacgaccagaagtccttgtcc
agcctccgcagctccccctgcgccaactgggccaccagcagcacctggggcagccgccgc
tccagctggaacagcctgggccgggcgcccagcctcaagaagaagaaccagtcgggagag
cgggaatcgctgctgtccggagagggcaagggcagcacggacgacgactcggacgacgcc
aagtccagcacgccgagccggccctcgccgccgcgccgcgcggaatccctggatcgccgc
ggctcccaggagctgcccgagctgctgcgggtgccctcggtgcggcagctgggcctgggc
cccgccgccctgctgcccgccgagctccgcggctgcaacggcaagatgggccacggcgcc
gccgagttcttcctcagggtggacgcgcacaaggaggacgcgctggactacgaggatgac
gcggaggatagttattgctaccggatccgcaaagccctggagccctacaaaccccagtgg
tgcaagactcacgagaactggtccctctacgtgttctccccacagaacaggttccgagtg
atgtgccagaaggtcattgctcacaaaatgtttgaccacgtggtgctggtcttcatcttc
ctcaactgcatcaccatagctctggagagaccagacatcgaccccctgagcacggagagg
atattcctaagtgtctctaattacatcttcactgccatcttcgtggctgaaatgatggtt
aaggtggtagctcttggctttttctctggggagaacacgtatctgcagagcagctggaac
gtcctggatggagtgctggtctttgtgtccatcattgacatcattgtgtccatggcatca
gcaggaggagccaaaatcctgggagtccttcgtgtgttgaggcttctgcggaccctgaga
cctctccgagtcatcagcagagccccaggtctgaagctggtggtggaaaccttgatctcc
tccttgaggcctattgggaatattgttctcatctgctgtgctttcttcattatctttggg
attttaggggtccagctttttaaaggcaagttctactactgtgatggccctgatgtcaaa
aacatcaccacgaaggctgactgcaccaacgctcactacaaatgggtccggaggaagtac
aacttcgacaacttggggcaggccctgatgtccctgtttgtcctctcctccaaggacggc
tgggtgaacatcatgtacgacgggctggatgccgtgggcattgaccaacagcccatccag
aaccacaacccttggatgctgctctacttcatctccttcctgctcatcgtcagcttcttc
gtgctcaacatgttcgtgggggtggtggtggagaacttccacaagtgccggcagcaccag
gaggcggaggaggcgcggcgccgggaggagaagcggctgcggcgcctggagaaaaagcgc
aggagtaaggagatgtacctgtctgaagcccagcgcaggccctactacgccgactactcc
ccggccaggaggtacatccacagcctgtgcaccagccactacctcgacctcttcatcacc
ttcatcatcggcgtcaacgtcatcaccatgtccatggagcactacaaccagcccaagtcc
ctggatgaagccctcaagtactgcaactacgtgttcaccatcgtctttgtgttcgaggcg
ctgctcaagctggtggcctttggtttccggaggttttttaaggacaggtggaaccagctg
gacatggccatagtgctgctgtccatcgtggggatcactctggaggagatcgagatgaac
gctgccctgcccatcaaccccaccatcatccgcatcatgagggtgctcaggatagcccgc
gtgctgaaactgctgaaaatggccacaggcatgagagctctgctggacacggtggtgcaa
gccctgccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgct
gccctgggagtggaattgtttggcaagctggattgcagcgaggagaatccctgtgaaggc
ctgagccgccacgccaccttcaccaacttcggcatggccttcctcaccctcttcagggtg
tccacgggggacaactggaacgggatcatgaaggacacgctccgggagtgcacgcgggag
gacaagcactgcctcagctacctgcccgtcatctcccccgtctacttcgtcaccttcgtc
ctcatcgcccagttcgtcctggtcaacgtggtggtggcagtgctgatgaagcacctggag
gagagcaacaaggaggccaaggaggacgctgagatggacgctgagatcgagctggagatg
tccagagggagcaggagtggggccgtggccggggagagccgggcgctgcacgggaacctg
gagcacagcaagggcaagcagcaaggcctgggcagtgcagcctcgctgagggcccaggac
tcccagaacctgctggcagtgaggaagatctccgtgtccaggatgcattccctgcccaac
gacagctacatgttccggcccgtgaccccggccacggccccgctgcccctgcacgaggtg
gagatggaaacctacccctgcaaagccccaagaggatccatcacgtccatccgctcccag
cccgtggtgggcagctcctcgctgcgggtgcccacggaggccgtgcgctgccccggccac
gacgggcggcaccgctggaaggggctgggcccccacggctgcccccgatctcctgccctc
agcaagctgctctgcagacaggaggccgttcggacagactcggtagacggacagacagca
gagcacaaagacagcgtgcaggcagagcctggagagccccagccatcagcaaagcagccc
cagagcaccctcacccccagccctctcccagcctcccctccacgctctcccccatcctcc
ccacaccggcccctgggcgccctggcacggaagcacacgtgtggccagcacggcgttgcc
agccggccacccagccccggcagccctcccagccccgagggctgccagggcgagccctca
gacctggctgacgaggaggttcggcacatcaacagctcggccaaagactgggcagaggag
cactcggaccccggcagccgctccacgtcgcccttcccctccccggccccgtcccccgtg
cccctcaagaactgcagcacaagcagcctctcccgcagggagaaggacttgaagaagttc
tacagcaccgacgccaagggcttcctcagcaagcccagctgggccgacgagcagcggcgg
cattccatcgagatctgcccctccggcggcttccaggagcccgccgaggacacgcagcgg
ccccccggccacgtccagcccgaggccgactacatccacggagcccggaggaagaagaag
atgagcccgccctgcatttctatagatcctcccatggaggatgagggggccccgcgcgcc
aaaccctccgagaacaccctgctgcggaggagaacgccgtcctgcgagttcccggcctac
cgagaatccctggagctcccggagagccgaggggagcacctcagcatccccaacttctcc
ttcgagcagctggacggcggctccttgagcagcctctcggagctgctggacagcgggcag
tccacgccggcctccgcggactcgcggccggacgctgagcagaaaaaacaggatcactta
aaaactcagcggggcgacggcaaagagaggggcaaagagctgccgggcactgccaagagc
cccctgcacaagcaggacttgggccccgtgactgttgccacagaagaaggcacggatgac
ccggtatag
DBGET
integrated database retrieval system
