Passer montanus (Eurasian tree sparrow): 120513273
Help
Entry
120513273 CDS
T07277
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmoa03037
]
120513273 (IFT140)
Cilium and associated proteins [BR:
pmoa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
120513273 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WDR55
TPR_IFT80_172
TPR_GEMI5
TPR_COPA_B
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Rax2
Motif
Other DBs
NCBI-GeneID:
120513273
NCBI-ProteinID:
XP_039588437
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MAVYVDHRTDAPDSVASPSHIAWHPLHPLLAVASVSTAGGGCVDIYLEQGEHVPDSHVER
SSQVTLLAWHPSRPILASGWETGGVLILNKQDKEQHTLPPNHNAKITVLSWSTSGTCLVS
GDGHGVLYLWKMDHQGRVQSPALVKQEYGKCLWHCVFRPPPPTDDFVQLAKAAVSGDEKA
LDMFNWKKAGIGPPLKMAVQEGLSFFITLTDGSVHYVNEQGKTRQVLSTDSLVRKLLLLE
ERDVLLVITETLQLSLHAVSPEGEAEELMKVKLSGKTGHSADMILVDHSLVVTALGETVI
RFWDLDQDENYVLSLDMQFGFEGGECINCVSYCSAKGILAAGTSKGRVAMWKKAAGSHQS
TWALEGKEKWKFQASTELEGNVTQIKWGSRKNLLAVNNISSVVILSEQAMLAHFHQQVAV
VQVSPNLFNVTIFSTGTTHSLRVDMNASGVFATQDAVVFWNGKQVAVFEFSGDAFRSAGS
FLCDSPVLSVHGENLYTVEPYRIQVRTWQGTVKQLLVFSEAEGNPCLLDVCGNFLAVGTD
LAHLKIFDLSRRQAKVHCNSKSLSKLLPGHGDILSVKCNANGSKVSILVSRADGNIDSKI
YFYDVEMDQVMFFDFKAEHGDGRESLSAGQCIGKFVVEYPELHSHIPACHFWDQSEPRLF
VCEVIPETGFQPPDQKKIETKGTMDVWIISFFSTEEHGLLLQDSFPLPSSYQVLLGVEVP
HYYFAKKLGEAEKGASESGSGTVSQMAARRPMRDFIGLGDCDKTTQDAMLNFSYYLTAGD
MDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKICLGHMGHARGAKALREAEQEPEQKA
RVAVLAIQLGMLEDAERLYKDCKRYDLLNKFYQASNQWQKAIETAEAHDRVHLRTTHYNY
AKHLEATGQQNLALTHYEKSDTHRFEVPRMLSEDLQALENYINKMKDKSLWKWWAQYLES
QADMESALKYYALAQDYFSLVRVHCFQGNIDKAAEIANETGNGAASYHLARQYESQEDIK
QAVHFYSRAQAFNNAIRLCKANDLNDQLMNLALLSSPEDMIEAACYYEEKGDQMDRAVML
YHKAGHFSKALELAFATQQFGALQLIAEDLDEKSDPALLARCSGFFIEHAQYEKAMELLL
TAKKYHEALQLCLEQNLTITEELAEKMTVSKESQDLSEDSRRELLEQIADCCMRQGNYHI
ATKKYTQAGNKIKAMRALLKSGDTEKIVFFAGVSRQREIYIMAANYLQSLDWRKDAKIIA
NIINFYTKGGALDLLAGFYDACAQVEIDEYQNYEKAHRALTEAYKCLSKAKARSPVEQES
KLGHLQSRMSLMKRFIHAQRVYPEDTEEAVRQCELLLAEQDFDNAIRHGDVLGFLVQHYA
QVEEFHTAYRYLEEMQKRIPASNLSYYVSPQTMEAVHRGAGVPMSQALAPAHSGHGSMDN
REEEEVADEVEDP
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtacgtggatcatcgaacagatgctcctgattctgttgcctccccttcccat
atagcatggcacccacttcatccactcctggcagttgcttccgtcagcacagcaggtggg
ggctgtgtggatatctacctggaacagggagaacatgtgcctgattcccatgtggagaga
agctctcaggtcacattacttgcctggcacccttccagacccattctggcatcaggatgg
gagacaggaggagttctgatactgaacaaacaagacaaggagcagcatactctaccccca
aatcacaacgccaaaatcacagtcctgagctggagtacgagtggtacctgccttgtgtct
ggggatgggcacggtgtcttgtatctgtggaaaatggaccatcagggcagagtccagagt
cctgccctggttaagcaggagtatgggaaatgcttgtggcactgtgtttttcggccaccc
cctcctacagatgactttgtacagctggcaaaagcagctgtgagtggtgatgagaaagcc
ttggatatgtttaactggaagaaagctggaataggaccacctctgaaaatggcagtccag
gaaggactctccttctttatcactttgacagatggttctgtgcactatgtgaatgagcaa
gggaagacaaggcaggtattgtctacagacagtctggtccgaaagctcctgttgctagag
gaaagagatgttttacttgtaataacagagactctgcagttgtccttacatgcagtttct
cctgagggagaggcagaagagctcatgaaggtgaagttgagcgggaagactggtcattct
gcagacatgattctagtagaccatagcctggttgttacagcactaggtgagacagtcatc
aggttctgggatttggatcaagatgagaactatgtgctctccctagatatgcagtttggc
tttgagggtggagaatgtattaactgtgtatcttactgcagtgctaaaggtatcttggca
gctggaactagcaaggggagagtagcaatgtggaagaaagcagcaggatctcatcagagc
acatgggctttggagggcaaggagaagtggaagttccaggcatctacagaacttgaagga
aatgtcactcagataaagtgggggtcccgaaaaaacctgctggcagtgaacaacatcagc
tctgtggtgatcctcagtgagcaggccatgttggcacattttcatcagcaggtggccgtg
gtacaggtgtctcccaacctcttcaatgtgacgatcttcagcacaggaaccactcacagc
cttcgtgttgatatgaatgctagtggagtctttgcaactcaggatgctgtagtattctgg
aatgggaagcaagtggctgtctttgagttctcaggagatgccttcagaagtgcaggctct
ttcctttgtgactctccagttctgtctgtgcatggagaaaatctgtacacagtggagccg
tatcggatccaggtccgcacctggcagggcacagttaaacagctgctcgtgttctctgaa
gcagaggggaatccgtgcctcctggatgtctgtgggaatttcctggctgtgggaactgat
ctggctcacttgaaaatctttgatctctcacgcagacaggcaaaagtgcactgcaacagc
aagagtttatccaagctgctccctggccatggagacattttgtctgtgaagtgcaatgct
aatggcagcaaagtcagcatccttgtcagcagggcggatgggaacattgattccaagatc
tatttctatgatgttgaaatggaccaagttatgttctttgatttcaaggctgaacatgga
gatggtagagagagcctttctgctggacaatgcattggcaagtttgtagtggagtatcca
gagttgcacagtcacatccctgcttgccatttctgggaccagagtgaaccaagacttttt
gtatgtgaagtaattcctgaaacaggcttccaacctccagaccaaaagaaaatcgagacg
aagggcacaatggatgtttggattatatcattcttcagcactgaagagcatggccttttg
ctgcaggacagctttccattgccttcatcctaccaggttcttcttggtgtagaggtgcca
cattattactttgcaaaaaagctgggagaagctgagaagggagcatcagagtctggctca
ggaacagtctctcagatggctgcaagaagacccatgagagatttcattggattgggagac
tgtgataagaccacccaggatgccatgctgaacttcagctactatctcactgctggagac
atggatgaggccttcaaatccatcaagctgataaaaagtgaggctgtctgggagaacatg
gctcgcatgtgtgtgaagactcagaggctcgatgttgccaaaatttgcctggggcacatg
ggtcatgcaagaggagccaaggcactgcgggaggctgagcaagagccagagcagaaggcc
agggtggctgtgctggccatccagctgggaatgctggaggacgcagagcggctgtacaag
gactgcaaacggtatgacctcttgaacaagttctaccaggcctccaaccagtggcagaaa
gccattgaaacggccgaggctcacgaccgggttcacctgcgcaccacgcactacaactac
gccaagcacctggaggcaactgggcagcagaacctggcactcacccactatgaaaagtca
gacacacacaggtttgaagtacctcgaatgctctctgaagacttacaagccctggagaac
tacatcaacaagatgaaagacaaaagcctgtggaagtggtgggcacagtacttggagagc
caagcagatatggagtctgcattgaaatactatgcactggctcaggattatttttcccta
gtccgtgttcactgttttcaaggcaacattgacaaggctgctgaaatagcaaatgaaacg
gggaatggggcagcctcctatcacctggcacgccagtacgagagtcaggaggacatcaag
caggccgtgcacttctacagccgagcccaggcgttcaacaacgccatccgcttgtgcaag
gcaaatgatttaaatgatcagctgatgaacctggctctcctgagctcaccagaagacatg
atagaggcagcctgctattatgaggaaaagggggatcaaatggacagagctgttatgtta
taccacaaggcaggacacttctccaaagccctggagctggcctttgccacgcagcagttt
ggggccctacagctcattgctgaggacctggatgagaaatccgacccagccctgcttgcc
cgctgctccgggttcttcattgaacatgctcagtatgagaaggcaatggagctgctgctc
acagccaagaagtaccacgaagctctgcagctctgcctggagcagaacctaaccatcaca
gaggagctggctgagaagatgacagtctccaaggaatcccaggatctctctgaggattcc
cggagggagctgctggagcaaattgccgactgctgcatgagacaaggcaactaccacatt
gccaccaaaaaatacacacaagcaggaaacaagataaaggctatgagggcattgctgaaa
tctggagatactgagaaaattgtcttctttgcgggagtttccagacagagagaaatttat
atcatggcagccaactacctgcagtcactggattggcgtaaggatgcaaagattattgca
aatatcatcaacttctacaccaaaggaggggcccttgacctcctggcaggtttctatgat
gcatgtgctcaggtagaaattgatgagtatcagaactatgaaaaagcccacagagcactg
acagaagcatacaagtgcctttccaaagcaaaggccagaagccctgtggaacaggaaagc
aaacttggtcacctgcagagcaggatgagtctgatgaagcggttcatccatgctcagaga
gtttaccctgaagacactgaagaagcagtcaggcagtgtgaactgctcctggctgaacag
gactttgacaatgccatccggcatggtgatgtcctgggatttttggttcagcattatgca
caagtggaggaattccatacagcttatcgctacctggaagagatgcagaaaagaattcca
gcctcgaacctgagctactatgtgtccccacagaccatggaggccgtgcaccgaggagct
ggtgttcccatgagccaagccctggccccagcacactctggccatggcagcatggataac
agggaggaggaagaagtggctgatgaagtggaggacccctga
DBGET
integrated database retrieval system
