Passer montanus (Eurasian tree sparrow): 120513317
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Entry
120513317 CDS
T07277
Symbol
SOX8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120513317 (SOX8)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120513317 (SOX8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120513317
NCBI-ProteinID:
XP_039588560
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MLNMTEEHDKALEAPCSPAGTTSSMSHVDSDSDSPLSPAGSEGLGCAPAPAPRPPGAAAL
GAKVDAAEVDERFPACIRDAVSQVLKGYDWSLVPMPVRGNGSLKAKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQP
RRRKSVKAGQSDSDSGAELSHHAGTQLYKADTGLGGMADSHHHGDHTGQPHGPPTPPTTP
KTDLHHGSKQELKHEGRRLVESGRQNIDFSNVDISELSSEVINNMETFDVHEFDQYLPLN
GHAALPAEHGAAAASFGASSYAHSGAAAQVWTHKSPAAASPAAAEPGQQRPHIKTEQLSP
SHYSEQPHGSPAHSDSYGSYGGQACATSAAPAAAAASFSSSQCDYTDLQSSNYYNPYPGY
ASSLYQYPYFHSSRRPYATPILNGLSIPPAHSPTANWEQPVYTTLSRP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatgaccgaggagcacgacaaagcgctggaggctccgtgcagccccgcgggc
accaccagctccatgtcgcacgtggactcggactcggactcgccgctctcccccgccggc
tccgaggggctgggctgcgcccccgcgcccgccccgcgcccgccgggcgccgccgcgctg
ggcgccaaggtggacgcggccgaggtggacgagcgcttccccgcctgcatccgcgacgcc
gtctcgcaggtgctcaagggctacgactggagcctggtgcccatgcccgtccgcggcaac
ggatcgctgaaagccaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcg
caggcggcccgcaggaagctggcggatcaatacccgcatctgcacaacgccgagctcagc
aagaccctgggcaagctctggcgtttattgagcgagaacgagaaacgtccctttgtggag
gaagccgagcggctcagggtgcagcacaaaaaggatcacccggattacaaataccagccc
cggaggaggaaaagcgtcaaagccgggcagagcgactcggactcgggggctgagctcagc
caccacgccggcactcagctctacaaggccgacacggggctggggggcatggccgactcc
caccaccacggcgaccacacaggccagccccacggacctcccacgccgcccaccaccccc
aaaaccgacctgcaccacggcagcaagcaggagctgaagcacgagggccggcgcctggtg
gagagcggccgccagaacatcgacttcagcaacgtggacatctcggagctgagcagcgag
gtcatcaacaacatggagaccttcgacgtgcacgagttcgaccagtacctgcccctgaac
ggccacgcggcgctgccggccgagcacggcgccgcggccgcctccttcggcgcctcctcg
tacgcgcactcgggcgcggccgcgcaggtgtggactcacaagagcccggccgcggcctcg
ccggcggcggccgagccgggccagcagcggcctcacatcaagacggagcagctgagcccc
agccactacagcgagcagccccacggctcgccggcccactccgactcgtacggctcctac
ggcggccaggcctgcgccacctcggccgccccggccgccgccgccgcctccttctccagc
tctcagtgcgactacacggacctgcagagctccaactactacaacccctaccccggctac
gcctccagcctgtaccagtacccctatttccactcgtcgcgccggccctacgccaccccc
atcctgaacgggctgtccatcccgccggcgcacagccccaccgccaactgggagcagccc
gtctacaccacgctgagcaggccttaa
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