Passer montanus (Eurasian tree sparrow): 120513326
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Entry
120513326 CDS
T07277
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120513326 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmoa01001
]
120513326 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pmoa04054
]
120513326 (CIITA)
Enzymes [BR:
pmoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120513326 (CIITA)
Protein kinases [BR:
pmoa01001
]
Serine/threonine kinases: Other
TAF1 family
120513326 (CIITA)
Pattern recognition receptors [BR:
pmoa04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120513326 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_9
LRR_8
LRR_14
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
120513326
NCBI-ProteinID:
XP_039588586
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MDSVFVPENGYLDLLHSDIDPLHLCTFFDPKSSGDEEGDFSTDLEVDASNYEQLNNMDFP
YENGDGFYPCCNTTDAYAKIAELVEYVLKDQQEKQVEDIFAGNLILDDIAAENTEKFPDI
KMQSCLKRTFLGSPAESYCDASEPKYKKTVEVPAASPGNGSFFAMPLNSHPVSCTSLTNQ
HMSCSVPAAHGLERSLIIPGLSEPLTSECLPVSVKGYQENPGLAGPPQQIFNFVLENNTS
DVLVYPVLTSSMETFMSPSFPVNLCDLEKFQETQDSMIPSEEPFKRPEQVESFCSALKDY
FRDTCRSVSMEREVNLDHLFIDGTLVQSQAETKTGKNSAKAMEKELVTCSLQEKEKTAID
RSQIFQIPQRKDLETKVIVVLGKAGMGKSILVQKICQDWSNGEFSQFEFVFWFDCKQISL
PEKQYSLKELLLEFFVKPQEGSKEIFEYILQNPDKVLLIFDGFKGLHDHENFPRCSASQP
EKDLCSIKELLSGLIQKKILNGCTLLFTARPKDKLYQYVSKVDKTIEIVGFSPQQRELYI
TKYFEESLYCDSALKLIRECEYLFSHCYSPVMCRFVCFLCETVLEMGEKSLPSTLTEVFL
KFFQQKIMFMQTDVTTTQNQESLATLARVAWCLGEKHQSAMKSDLIPSKEVKEFALKYGF
FLPFAFPRHSDSEEEEFGSTFSDFVIQNFLCALHLLLAEELKDKNLTKYLSFLSKKKKPY
NWLDLMPRFLAGLMFLQDDPYFCSLSNEDEKQSTKKQKTLLKYIRRLQINSLCPERLLEL
LCCVYETQNNYLLQHVALRLEPELSFLGMVLTPPDVHVLHSILKRSRKEFSLDLRNSSID
MQGLQALVSLRNVTSFRASLSDTVRLWKSLEQRKDYELLKVSTEKFVLDPFKAKTMKDIS
DLSDLVEMQEKMMNCVQEASGCTSYEIPAIRNLRKVEFALGPACGLQGLLKLVKILAAFP
SLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDLGAENLAAALPSLSS
LKTLSLYNNSICDFGAENLAKVLPAMKSLRVLDVQYNKITGVGAQQLTDSLRKCPHIKNL
VMWNPTIPYGVLEHLHQLDSRISV
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtatttgtgcctgaaaatggctaccttgatttactgcacagtgatattgac
ccattgcatctgtgtactttctttgatcctaagtcatctggagatgaagaaggtgacttc
tctacagatcttgaggttgatgccagcaactatgaacagttaaataatatggatttccca
tatgaaaatggagatgggttctacccctgttgcaacaccacagatgcttatgctaaaata
gctgaattagtagaatatgtgctcaaggatcagcaggagaagcaggttgaagacattttt
gcagggaaccttattttggatgacattgctgctgaaaacactgagaaatttcctgacata
aagatgcagtcatgtcttaaacgaactttcttaggctccccagcagagagttactgtgat
gcttcagaacccaaatataagaaaactgtggaagtccctgcagcttccccagggaatggc
agtttctttgctatgcctctcaacagccacccagtgagctgcacctccctaactaaccag
cacatgtcctgttctgttcctgctgcccatgggctggaaagaagcctcataattcctgga
ttgtcagaacctttgacctcagagtgcctaccagtcagtgtgaaagggtaccaagagaat
ccgggcttggcaggtcctcctcagcagatatttaactttgttcttgaaaataatacatct
gatgttctagtatatccagtgctgacatcttccatggaaacattcatgtctccaagtttt
ccagttaatttatgtgatttagagaaatttcaagaaactcaagattctatgattccttct
gaagaaccttttaaaaggccagagcaagtggaaagtttctgttcagcccttaaggattat
ttccgagacacgtgcagatctgtgagcatggagcgggaagtaaatctggatcacctgttc
attgatgggacacttgttcaaagtcaagctgaaaccaagactggaaagaatagtgcaaaa
gcaatggaaaaggagctggtaacctgcagcctgcaagagaaggaaaagacagccattgat
agaagccaaatatttcaaatcccacagcgtaaagacttggagactaaagtgattgtggtg
ctgggaaaagcaggaatgggcaaaagcattctcgttcagaagatctgccaggactggtcc
aatggagaattttctcagtttgaatttgtattttggtttgactgcaaacaaataagcttg
cctgagaagcaatacagcctgaaggagctgctgcttgaattttttgtaaaacctcaagag
ggaagcaaagagatctttgagtatatcttgcaaaatcctgataaagtccttctgattttt
gatggttttaaagggttgcacgatcacgagaattttcctcgttgctcagccagccagcct
gaaaaggatttgtgcagtataaaggagctgctttcaggactcatccaaaaaaagatactc
aatggctgtactttattatttacagcaagaccaaaagacaaactgtaccagtacgtgtcc
aaagtggataagactattgaaatcgtaggattttcccctcagcagagagaattgtacata
accaaatactttgaagaatcactctactgtgatagtgcactgaaattaatcagggagtgt
gagtacttgttcagtcattgttacagtcctgttatgtgtaggtttgtttgttttctctgt
gagacagtgcttgaaatgggagagaaaagccttccttcaactcttactgaagtcttcctg
aaattttttcagcagaagataatgtttatgcaaacagatgttacaaccacacaaaatcaa
gagagtcttgctaccctagctcgtgtagcctggtgtcttggagaaaagcaccaaagcgcc
atgaaaagtgatcttattccttctaaggaagttaaagagtttgctctgaagtatgggttt
ttcctgccatttgcattccccagacattcagatagtgaagaagaggaatttgggagcaca
ttctctgattttgtcattcagaatttcttgtgtgcacttcaccttttgttagcagaagag
ctcaaggataaaaatctaacaaagtacctatcttttctatccaagaagaaaaaaccttat
aactggttagatttaatgcctcgatttttggctggtttgatgttcctccaggatgacccc
tacttctgctctctttcaaatgaggatgaaaaacaatcaacaaagaaacagaagacactc
ttgaaatacatcaggaggctgcagattaatagtctctgtccagagaggttgctggagctt
ttgtgttgtgtttatgaaacacagaacaattatcttctgcagcatgtggccttaagactg
gagccagagttgtcttttctgggcatggttcttacaccacctgatgtccatgtactgcac
tctattttgaaaaggtcaagaaaagagttttccttggatttgcggaacagcagcattgac
atgcaagggctgcaagccttggtgagcctgaggaatgtgacatcattcagggcttctctc
agtgacacagtcaggctctggaaatctttagaacaaagaaaagactacgaactgctgaaa
gtatccacagagaaatttgttcttgatccctttaaggcaaagacaatgaaggacatcagt
gacctctccgacctcgtagagatgcaggagaagatgatgaattgcgtgcaagaagcatct
ggttgcaccagctatgaaattcctgccatcagaaacctcagaaaagtcgaatttgcgctg
ggtccagcatgtggccttcaaggattgctaaaactcgtgaaaattcttgcagcatttcca
tcacttcagcatttagaccttgatgctctgagtgaaaatggcataggagatgaaggagca
aagagtctgtctgaagtctttccaaccctgacatcactggaaacattaaatttatcacag
aataaaataacagacctgggtgcagagaacctcgctgcagctctcccttccttgtcttcc
ttaaaaacactaagcttgtacaataacagcatttgtgattttggagcagaaaatctggca
aaggttcttcctgcaatgaaatctttaagagtgctagatgttcagtataacaaaataact
ggtgttggagcccagcagctgactgacagcctacgcaaatgtccccatataaagaacctg
gtgatgtggaatcccaccattccctatggagttctggaacaccttcaccagctggactcc
aggatcagtgtgtag
DBGET
integrated database retrieval system
