Passer montanus (Eurasian tree sparrow): 120513534
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Entry
120513534 CDS
T07277
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120513534 (SIX4)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120513534 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
120513534
NCBI-ProteinID:
XP_039588999
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MSSASPAADDIVIAVEIKEENVMEMLSEAPEGPAPPPPPAAAPFPMEHAGSAAAGEEGAA
EQVLLHTELLARNHHAASSPSSSSSSSSSSSQTPLAFSPDHVACVCEALQQGGNLDRLAR
FLWSLPPSDLLRGNESLMKARALVAFHQGIYAELYSILESHNFDSSNHPLLQELWYKARY
TEAERARGRPLGAVDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPA
EKRNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGREDLSPHP
LSSSSDGVTSLSLPGHMEPVYMQQLGNTKIALSSSGVLLNGNLMPASTSPVFLNGSSFLQ
GPNSVILNGLTVGTSQTVTLNSPKTAASVVSNGVSITDILSSSSSEDVKDFKLLQASVPN
ATAAFSPSNIPVTFPGLIPSSEVKREGVETAASQDGGSVVTFTAPVQINQYGIVQIPNSG
TNGQLLNGSIGFSSLQLPPVSVAATQGNVSANPSTSDGGTFTTESSTVQQGKVFFSPLTP
SAVVYTVPNSGQAVGSVKQEGLERSLVFSQLMPVSQNTQLNVNMSSENISSAGLQSLASS
LVNVTPSHNFSLTPPTLLNAAELSSGISESQAMSSPVTSTSTVISISNTNYATLQNCPLI
TSQDLLSISTAQPVLGEIVSTSGDRVSHPPAQVHQDFGREHRLVLQAVPDVKENFLPNSE
SKSTGNLMMLDSKSKYVMSNMVDTVCEELETDKKELAKLQTVQMDEVMQDL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcctcccccgccgcggacgacatcgtgatcgcggtagagatcaaggaggaa
aatgtgatggaaatgctctccgaagcccccgaggggcccgcgccgccgccccctcccgcc
gctgccccgttccccatggagcatgccggctccgctgccgccggcgaggagggagccgcg
gaacaggtactgctccatacggaactcctggccaggaaccaccacgctgcctcctctccc
tcctcttcatcctcctcctcctcctcctcctcgcagacccccttggctttctccccggac
cacgtcgcctgcgtgtgcgaggcgctgcagcaaggtgggaacctggaccgcctggccagg
ttcctgtggtctttgcccccgagcgatctgctacgtggcaacgagagcctgatgaaagcc
cgggcgctggtggcttttcaccagggcatctacgccgagctctacagcatcctggagagc
cacaacttcgactcctccaaccacccgctgctgcaggagctctggtacaaagctcgctac
accgaggcggagcgagcccggggcagacccttgggggcggtggacaagtacaggttgcgg
aggaaataccccctgcccaggaccatctgggacggcgaggagacggtctactgcttcaag
gagaagtcccgcaacgcgctgaaggagctctacaagcagaaccgatacccctcgcccgcc
gagaagcgcaacctggccaagatcaccgggctgtccctcacccaggtcagcaactggttc
aagaaccgcaggcagcgggaccgcaacccttccgagacccagtccaaaagcgagtcagat
ggcaaccctagcacggaagatgaatccagtaaggggcgggaggatttatctccccatccc
ctctccagctcgtccgacggcgttaccagcctcagccttcccggccacatggagcctgtc
tacatgcagcagcttggaaacactaaaatagccttgagctcgtccggtgtcctgttgaat
gggaacctcatgcctgccagtacctctcctgtcttcctcaatggtagctcatttcttcag
ggacccaacagcgtcatactcaatggactcaccgtgggcacttcacagactgttacctta
aattcgcccaaaactgcggcgagtgttgtgagcaacggggtgtccatcactgacatactg
tcctcatcgtcctcagaagatgtcaaagacttcaaactccttcaggcttcggtccccaat
gccacagcagccttcagccctagcaacatcccagtcactttcccaggattgataccgagc
tcagaggtgaaaagggaaggcgtagaaactgctgcttcccaggatggaggctccgtagtt
acttttactgctcctgtccaaataaaccagtatggcattgtccagatccccaattcagga
acaaatggccagctgctgaacggaagcattggtttttcttctctgcagctgcctccagtt
tctgtggcagctacacaaggtaatgtttcagcaaaccccagcacatctgatggaggaact
tttacaactgaatcttcaacagtgcagcaaggaaaggttttcttcagccccctcactccg
agtgcagtggtttatacagttcccaattcgggccaggcagtaggatctgtcaagcaagaa
ggactggaaagaagcctggtgttttctcagttgatgccagtcagtcagaacactcaactg
aacgtcaacatgtcttctgaaaatatatccagtgcagggctccagtccctggcctcctcc
ttagtgaatgtaacaccctcgcataatttttccctcacaccaccaactcttttaaatgct
gcagaactgagctctggtatctcggagagccaggccatgtcctcacccgtgaccagtacc
tctacagtgatatctatcagcaacactaactatgcaacccttcagaactgtcccctcatc
accagtcaggatctgttgtccatttccacagcgcagcccgtgcttggagaaatcgtttcc
acgagtggagaccgtgtcagccacccccctgcacaagtgcaccaggattttggcagggag
cacaggttggttctgcaagccgtacctgatgtcaaagagaatttcttacctaattctgag
agtaagtcaactggcaatttaatgatgctggattccaaatctaagtatgttatgagtaac
atggttgacacggtgtgtgaagaactggaaacggacaaaaaagaacttgccaaactgcag
acagttcagatggatgaagttatgcaagacttgtaa
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