KEGG   Passer montanus (Eurasian tree sparrow): 120513600
Entry
120513600         CDS       T07277                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120513600 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmoa03400]
    120513600 (APTX)
Enzymes [BR:pmoa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     120513600 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     120513600 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     120513600 (APTX)
DNA repair and recombination proteins [BR:pmoa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120513600 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     120513600 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_4 FtsK_SpoIIIE_N
Other DBs
NCBI-GeneID: 120513600
NCBI-ProteinID: XP_039589108
LinkDB
Position
Unknown
AA seq 494 aa
MAVREGKALGQSAPAFAARTERGPRPARRGRWRPRPAFASPCACALGRPRPRRHRAAPGT
GRRPGRRLPGTFRAFPPLSLRGPGSAPHRPAGGPVRSTLPRFCEDPVPTPGCAGPVRLRR
APRRVPLPGHAGDAPQQLIGCGGGAKVARARSVMRVCWLVGKEECTQRVKLPHLEAVVIG
RGPETGITDKKCSRQQVQLKADCNKGYVTVKQIGVNPTSVDLVNIGKDEVVKMKPGQVLH
IVNNLYPYMVQFAEESGKTVPKADKIPHEENDDIELVPRKTMKLEVVDTQGSSTNPKLSN
TSVSAQEGTSSKKEHLGHWSQGLKSSMQDPKMQVYKDEKTVVIKDKYPKARYHWLILPWD
PISSLKSVTRDHLELLEHMHAVGQKMIEQCPARESLEFRLGYHAIPSMSQLHLHVISQDF
DSPALKTKKHWNSFTTDYFLNSQDVIEMVRSKGKVMVKDHTSELLKLPLRCHRCKQQLST
IPQLKEHLRKHWPK
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggctgtgcgggaggggaaggcacttggccaatcagcgcccgccttcgccgcccgcact
gagcgcggaccccgccccgcccggcgcgggcggtggcgtccccgcccagcctttgcttcc
ccttgcgcctgcgcgctgggccgcccccgccctcggaggcaccgagctgcgccgggcacc
ggacgtcggcccggccgccgccttcccggcactttccgtgcctttccccccctctcccta
cgcgggcctggctccgcgccgcacaggccggccggcggccccgtccgctccactctaccg
cgcttttgcgaggacccagtgcccactcccgggtgcgcgggcccagtgcgcctgcgccgc
gcgccgaggcgggtgcctctgcctggtcacgcgggggacgcgccgcagcagctgattggc
tgcggcggcggcgcgaaggtcgcgcgcgcgcgctcagtgatgcgtgtgtgctggctcgtg
ggcaaagaggaatgcactcagcgagtgaaactgccgcacttggaggctgtggtgattggg
cgtggcccagagactgggataacggataagaagtgctcgcggcagcaagttcagttaaaa
gcagactgtaacaaggggtatgtcacagttaaacagataggggtcaacccaactagtgtt
gatcttgtgaatattggcaaggatgaagtggtgaaaatgaagccaggccaagttctgcat
attgtaaataacctttacccctacatggtgcaatttgccgaagagtctgggaaaactgtt
ccaaaagcagataagattccacatgaagagaatgatgatatagagcttgtgcccagaaaa
accatgaagctggaggtggtggatacacaaggcagttctacaaatccaaagctaagcaat
accagtgtatctgcacaggaaggaacttcgagcaaaaaggaacatttaggacactggagt
cagggtctgaagagctccatgcaagatccaaaaatgcaggtttacaaagatgaaaagact
gtagtcatcaaggataaatatcccaaagcacgttaccactggcttatcttaccatgggac
cctatttcaagtctgaaatcagtcaccagggaccaccttgaactcctggaacatatgcat
gctgttgggcaaaaaatgatcgaacagtgccctgccagagagagcctggagttccgactg
ggttaccatgctatccccagtatgagtcagctacatttgcatgtaatcagccaggatttt
gattctccagccctgaaaaccaaaaagcactggaattcttttactacggactacttctta
aactctcaagatgtgatagagatggtaagaagcaagggaaaagtgatggtgaaagaccat
acctctgaacttctcaaacttcccctcagatgccatcgctgtaaacaacagctgtccaca
atcccacagttaaaggaacatcttcggaaacactggccaaaatga

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