KEGG   Passer montanus (Eurasian tree sparrow): 120513796
Entry
120513796         CDS       T07277                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmoa03036]
    120513796 (KDM4B)
Enzymes [BR:pmoa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     120513796 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     120513796 (KDM4B)
Chromosome and associated proteins [BR:pmoa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120513796 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Tudor_3 DUF4537
Other DBs
NCBI-GeneID: 120513796
NCBI-ProteinID: XP_039589456
LinkDB
Position
Unknown
AA seq 1095 aa
MGSEHPSPQNPGCKIMTFRPSLDEFRDFGRFIAFMESQGAHRAGLAKVIPPKEWKPRRTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMSVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYELWKQGKDIAVLDHMKPTALSSPELDAWNE
TKAELKAKLLRRIGDEEEDSKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDLEEEERSKGMEGEAGECKAKARPPKAKAERKKKQLFPPQPLGPPPGPVPAPQPS
PEAGPGPARPPGPPSAPGTEQGRPVAPLNVVQPSEAPAEEDDFKPRPIIPMLYVVPRSKK
VVFDKEHMSCQQAFEQFATQKGLGWREPGPPQGPGKEQDGAEAERAPLTAEAASAFSKMK
MEIKKSRRHPLGKPPTRSPLSVVKQETSSDEEMFPFSGEEDMSDPEALKSLLSFQWKNKA
LNFPAERKFNAAAALSEPYCAVCTLFYPYNQSSQVEKEAAPVSAGEPSSFLHLSKCGQRT
KPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVHASCYGIRPELVNESWS
CSRCSAGAWAAECCLCNLRGGALQMTTDGRWVHVICAIAVPEARFLNVIERHPVDISAIP
EQRWKLRCVYCRKRMKKVSGACVQCSYEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCF
KHKAANQNVPFRREVALGQTVITKNRNGLYYRCRVIGTSTQTFYEVNFDDGSYSDNVYPE
SIISRDCIQLGPPPEGELVQLQWTDGIIYKAKFIAAQISHIYQVEFEDGSQLMVKRGDIY
TLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRAAKRPRLGNPRNPEEYGQTPDYLAFMES
LLQTQYQPGTQSNMF
NT seq 3288 nt   +upstreamnt  +downstreamnt
atggggtcggaacacccgagcccgcagaaccctggctgcaagatcatgaccttccggccc
tcgctggacgagttccgcgacttcggcaggttcatcgccttcatggagtcccagggagcc
caccgggctgggctggccaaggtgatcccccccaaggagtggaagccgcggcgcacgtac
gacgacatcgacgacatggtgatcccagcgcccatccagcaggtggtcacgggccagtcg
gggctcttcacccagtacaacatccagaagaagcccatgagcgtgggcgagtaccggcgc
ctggccaacagcgagaagtactgcaccccccggcaccaggacttcgaggacctggagcgc
aagtactggaagaacctcacctttgtgtctcccatctatggggctgatatcagtggctcc
ctctatgatgcagacgtggatgagtggaacattggcaacctgaacaccctcctggacatg
gtggagcacgagtgtggcatcatcatcgagggtgtgaacactccctacctctactttggg
atgtggaagacaacttttgcttggcacacagaggacatggatctctacagcatcaactac
ttgcattttggggagcccaaatcctggtatgccattcccccggagcacggcaagaggctg
gaacgcctggcaaaaggatttttcccaggaagctctcagggatgtgatgctttcctccgt
cacaagatgaccctcatttctccctccatcctgaagaagtatgggattccctttgacagg
atcacccaggaggccggggagttcatgatcacatttccctatgggtaccacgctggcttc
aatcacggcttcaactgcgccgagtccaccaacttcgccaccctgcgctggatcgactac
ggcaagatggcaacacagtgcacgtgccgcaaggacatggtgaagatctccatggacgtg
tttgtcagggtgctgcagcccgagcgctacgagctctggaagcagggcaaggacatcgct
gtgctggaccacatgaagcccacggccctgagcagccccgagctcgacgcctggaacgag
accaaggcagagctgaaggcaaagctgctccggaggataggagatgaggaagaggacagc
aaacaccggtctcacagaaaaaggagtcagcccagaagacacaaaacagaggatcagaag
tctcttggggatgtcatggctattgaaactgccttggaagatgtgaaagtaaaagaggag
ctgaaaagggggccggatctggaggaagaggagagaagcaaagggatggagggagaagca
ggcgagtgcaaggccaaggcgcggcccccgaaggccaaggccgagcggaagaagaagcag
ctgttcccccctcagcccctggggccgcccccggggcccgtcccggcccctcagccctct
cccgaggccggcccgggcccggcacggcccccggggcccccctcagccccgggcacggag
cagggccggcccgtggccccgctgaacgtggtgcagccctcggaggcgccggccgaggag
gacgacttcaagccgcggcccatcatccccatgctgtacgtggtgccccgcagcaagaag
gtggtgttcgacaaggagcacatgtcctgccagcaggccttcgagcagttcgccacgcag
aaggggctgggctggcgcgagccgggcccgccgcagggccccggcaaggagcaggatggc
gccgaggccgagcgcgccccgctcaccgccgaggctgcttctgccttctccaagatgaag
atggagatcaagaagagccgccggcacccgctgggcaagcccccgacgcgctccccgctg
tccgtggtcaaacaggagacctcgagtgacgaggaaatgtttccattttctggagaggaa
gatatgagtgatccagaggctttgaaatctttactttccttccagtggaagaacaaagca
cttaatttcccagctgaaaggaagttcaatgcagctgctgccctgagtgagccatactgt
gctgtctgcaccctcttctacccctataaccagtcctcacaggtggagaaggaagctgcc
ccagtctctgcaggggagccgtcctcgttcctgcacctttccaagtgtggccagaggacc
aagcccctgatcccagagatgtgctttacctcaagtggagaaaacaccgagccccttcct
tcaaattcctacattggagaggatggaaccagtcccttgatatcctgtgccaaatgctgc
ctgcaggttcatgctagctgttacgggatacgcccggagctggtgaacgagagctggtcg
tgctcgcggtgctcggccggcgcctgggcagcggaatgttgcctgtgcaatctcagggga
ggagctctccagatgaccactgatggcaggtgggtccacgtcatctgtgccattgctgtc
cccgaggcgcgcttcctcaatgtcatcgagcgtcatcctgtggatatcagcgccatcccc
gagcagaggtggaaactgaggtgtgtgtactgcaggaagaggatgaagaaggtgtctggg
gcctgtgtccagtgctcctacgagcactgctccacgtccttccacgtgacgtgcgcgcac
gcggccggcgtgcccatggagcccgacgactggccctacgtggtgtccatcacctgcttc
aagcacaaagctgcaaaccagaacgtgccgttccgcagggaggtggccctggggcagaca
gtgatcaccaagaacaggaacgggctctactatcgctgcagggtcatcggcaccagcacc
cagaccttctacgaggtcaacttcgacgatggctcctacagcgacaacgtctaccccgag
agcatcattagcagggactgcatccagctggggccccctcccgagggggagctggtgcag
ctgcagtggacggacgggatcatctacaaggccaagttcattgcagcccagatcagccac
atttaccaggtggagtttgaggatggctctcagctaatggtgaagcgtggggatatttat
accttggaggaagagcttcccaagagagtcaagtctcgcctgtccctcagcactggggcc
cctcaggaagatgtattttcaggagatgaagtgagagcagccaagcgtccccggctgggg
aatccaaggaatcctgaggaatatggacaaaccccagattacttggccttcatggagagc
ctgttgcagacacagtaccagcctgggactcagagcaacatgttttaa

DBGET integrated database retrieval system