Passer montanus (Eurasian tree sparrow): 120513864
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Entry
120513864 CDS
T07277
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03013
Nucleocytoplasmic transport
pmoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120513864 (SRRM1)
03015 mRNA surveillance pathway
120513864 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120513864 (SRRM1)
03041 Spliceosome [BR:
pmoa03041
]
120513864 (SRRM1)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120513864 (SRRM1)
Spliceosome [BR:
pmoa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
120513864 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
120513864
NCBI-ProteinID:
XP_039589596
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DVPKAPKPEPPVPEAKETSPERNSKKEREKEKEKTRQRSPSRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRPVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRASVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRHRHSHSRSPSPRKRQKDSSP
RMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRRS
PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAK
RRSPSESSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHPSSSPAAPRRGASASPQR
RQSPSPSSRPIRRVSRTPEPKKTKASTPSPRRVSSSRSASGSPETAPKKHQGPASPARSR
SPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAA
AAAVAAAVAPADTTSAQGDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSP
PS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgggttcttccgcggaaccagtgcagagcaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaagtttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttattttcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacaacgacagatagagcaggagaaa
ctggcttccatgaagaaacaagatgaagacaaagagaagagagataaggaagacaaagac
aacagagagaaaagagacagatccaggagtccaagaagacgcaagtcccgctctccctcc
ccgcggcggcggtcgtcgcccgtgcgccgcgagcggaagcgcagccactcccgctccccg
caccaccgcaccaagagccgcagtgccacccctgcccccgagaagaaagaggccactcct
gagccagagccctccgtgaaaccaaaggagactgttgtgcaagaggcaacttcaaacagt
gatgtcccaaaagctcctaaacctgaaccacctgtaccagaggctaaggaaacttcacca
gaacgtaactcaaagaaggagagagagaaggagaaggagaagactcgtcagagatcccca
agtcgatccaagtccaggtcaagatcccgatcccggtctccatctcattctcgacccaga
aggcgccatagatcgcggtcaaggtcttactcccctagaaggcgacccagcccgcggcgc
cggccgtccccgcgcaggaggagccccccccggaggatgcctcccccacccaggcacagg
aggagcagatcccccgtgaggcggagaagacgctcctcggcctcgctgtccggcagcagc
tcctcctcctcctcgtcgcgctcccgctctccgccaaagaagcctcccaagagacccgtg
tccagccccccccgcaaaacgcgccggctgtccccctcggccagccccccccggcgccgc
caccggccctcgccccccgccagccccccgcccaagccccgccgctcgcccacgccccag
cagtccaaccgcgcccgcaagagccgcgcctccgtctcgcccagcagggcctcagcaccc
aaacataagagtactgagaagagagagtctccttcgccagcgcccaagcccaggaaagca
gagttgtcggaatcagaagaagacaaaggaggcaaaatggctgcagcagattctgtccaa
cagaggcgccagtacaggaggcaaaatcaacagtcttcatctgattctggttcttcatct
tcctcagaggaggagaggcccaagaggtcgaacgtgaagaacggggaggtgggcaggcgc
caccggcactcgcactcgcgcagcccctcgccccgcaagcgccagaaggattcctcccct
cggatgcagatggaaaagaggtggcaatcaccagtgatgaaaagcaggaggaggaggagc
ccctcgccgccccccgcgcgccggcgccgctccccttccccagcgccgccgccccggcgc
cgccgctccccgtccccgcctcgccgaaggtctccatcaccacccccgcgcagacgttct
ccctctccacggagatactcccccccgatccagaggcgatattccccatctccccctccc
aagaggagaacagcttctcctcctccccctcccaaaagaagggcctccccttccccccag
tccaagcgcagagtctcccactccccaccaccaaaacagaggagctcccctactgctaaa
cggcgctccccttccgaatcttccaagcacaggaaggggtctcctcccagcagatccaac
agggaaacacgttctccaccacaaaacaaaaggcattcaccttcaccacggcctcgagct
tcccacccctcctccagccctgctgcgccgcgccggggagcgtcggcgtcgccgcagagg
agacagtcaccctcacccagcagcaggcccatcaggagggtgtccagaacgccagaaccc
aagaaaacaaaggcttccacccccagcccccggcgcgtgtcctcgtcccgctctgcgtca
ggctcacctgagacagctcccaagaaacaccaaggacctgcatctcctgcccggtctcgc
tctccttctgcaaactggtcacctgcaaaaaaggccaagagcccaactcagagcccatca
cctgccaggaattcagatcaagaaggtggtggcaagaagaagaagaaaaagaaggataag
aagcataaaaaggataaaaagcacaagaaacacaaaaagcataagaaggagaaggcagca
gcagctgcagtagctgctgctgtggctccagcagacaccacctcagcacagggagaccag
gaagcagagacagaacccaaaaaggagacagaaagtgaacccgaggacaacctggatgac
ctcgaaaagcacctgcgggagaaggcgctgaggtccatgaggaaggcgcaggtgtccccc
ccctcctag
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