Passer montanus (Eurasian tree sparrow): 120513918
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Entry
120513918 CDS
T07277
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04510
Focal adhesion
pmoa04512
ECM-receptor interaction
pmoa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120513918 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120513918 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120513918 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmoa00535
]
120513918 (COL9A2)
Proteoglycans [BR:
pmoa00535
]
Extracellular matrix (ECM) proteoglycans
Others
120513918 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120513918
NCBI-ProteinID:
XP_039589727
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MARATSLVSPLWLLLQASCLCLAQLRGPPGEPGPRGPPGPPGVPGADGIDGDKGPVGSAG
SPGAKGEPGAPGPDGPPGKPGIDGLTGAKGEPGPTGRPGVKGQPGLPGPPGLPGPSLPGP
PGLPGQVGLPGEIGVLGPKGDPGPDGPRGPPGPPGKPGLPGHLQGLEGSADFLCPTSCPP
GPKGPQGLQGLKGHRGRPGALGEPGKQGEPGPKGDVGASGEQGVPGPPGPQGLRGYPGMA
GPKGETGPAGYKGMVGSIGAAGRPGREGPKGPPGGPGDKGELGGRGIRGPQGDIGPKGEN
GLPGIDGKDGTPGIPGVKGGTGQAGRPGTPGHRGQAGLPGQPGSKGGPGDKGESGPRGHP
GVTGAPGQLGEPGPRGEQGPQGVPGPKGDRGERGLVGPPGEPGRAGPKGEQGPPGIPGPQ
GLPGVKGDKGSPGKTGPKGSIGDPGVHGLAGLKGEKGESGEPGPKGQQGIQGELGFPGPS
GDAGAPGVRGYPGPPGPRGLVGERGVPGMPGPRGTAGRDAGDQHIVDVVLKMLQEQLAEV
AVSAKRAALGGVGAMGPPGPPGPPGPPGDQGPHGPMGPRGVPGILGAAGQIGNVGPKGKR
GEKGERGEVGRGHPGMPGPPGIPGLPGIPGHAVDGKAGERGPPGAPGEAGRPGSPGPPGL
PGFCEPAACLGASAYAAARLTEPGSVKGPSF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgccaccagcctggtgtcgccgctctggctcctgctccaagcgtcctgcctc
tgcctggcccagctccgagggcccccaggagagcctggcccacgagggccccccggtccc
ccaggagtgccgggagccgatggcatcgacggtgacaaaggccctgtaggatctgctggc
tccccgggtgccaagggcgagcctggagctcctggtccggatggacccccagggaagccg
ggcattgatggcctgacgggagccaagggggagccaggacccactggcaggccaggagtc
aaaggccagcccggactcccagggccaccagggctccctggtccttcactgccaggacct
cctgggcttccaggccaggttggacttcctggagagatcggagtgctgggacccaagggt
gaccccggacccgatggcccgaggggtcccccaggccctccagggaaacctggactccca
ggacacctccaaggcctggaaggcagcgctgatttcctgtgccccaccagctgcccccca
ggtcccaagggcccccagggactgcagggactgaagggacacagaggccgccctggtgcc
ctcggagagcccggcaagcagggagagccgggccccaagggggatgttggtgcctcagga
gaacaaggagtcccaggccctccgggacctcagggcctccgggggtatcctggcatggca
ggacccaagggggagacgggccctgctggctacaagggcatggtcgggagcatcggagcc
gccgggcggccgggcagggaaggccccaagggaccacccgggggccctggtgacaaggga
gagctgggtggccgtggcatcaggggaccgcagggtgacatcggccccaagggggagaat
ggtctcccgggtatcgatggcaaggatggcaccccaggtatcccaggagtgaagggtggc
acaggacaggccggacgcccgggaacgccgggacaccggggacaagctggattgccgggc
cagccgggaagcaaaggtggcccaggtgacaagggtgaatcgggtcctcggggccacccc
ggtgtcaccggtgccccagggcagcttggcgagcccggacctcggggtgagcagggcccg
caaggtgtccccgggccgaagggtgacaggggcgagcgtggcctcgtggggccccccggg
gagccgggcagagcggggccaaagggtgagcagggccctccaggcatcccaggaccccaa
ggcttgcctggagtcaaaggagacaagggctctccagggaaaaccggccccaaaggcagc
attggagatccaggtgtccacggcctggcagggctcaagggagagaagggggagtcagga
gagccaggacccaagggacagcaaggcatccagggagagctcggctttcccggcccctcg
ggggatgcaggagcaccgggagttcggggctatcccggcccgcccggcccgcgggggctg
gtgggggagcgcggagtgccgggaatgccgggcccgaggggcacagccggccgggatgct
ggggaccagcacatcgtggacgtggtgctgaagatgctgcaagagcagctggcagaggtg
gccgtgagcgccaagagagccgctctgggtggggtcggggccatgggaccccctggtccc
cccggccccccagggccacccggtgatcagggaccccacggccccatgggaccccgaggt
gtccccggaatcctgggagctgccgggcagatcggcaatgtcggacccaaagggaagaga
ggagagaagggcgagcggggagaggttggccgtggccacccgggaatgccgggtcctcca
gggatcccaggtctcccgggcatcccaggccacgctgtggacggcaaggcgggcgagcgg
ggcccgccgggcgccccgggcgaggcgggccggccgggctccccggggcccccggggctg
ccgggcttctgcgagccggccgcctgcctgggagcctcggcctacgcggccgcacgcctg
acggagccgggcagcgtcaagggcccctcgttctga
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