Passer montanus (Eurasian tree sparrow): 120513929
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Entry
120513929 CDS
T07277
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120513929 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120513929 (ARID1A)
03021 Transcription machinery [BR:
pmoa03021
]
120513929 (ARID1A)
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120513929 (ARID1A)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
Helix-turn-helix
ARID
120513929 (ARID1A)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120513929 (ARID1A)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120513929 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
120513929
NCBI-ProteinID:
XP_039589745
LinkDB
All DBs
Position
Unknown
AA seq
2253 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPSELKKAEAQQRDCPPEEAGGEAAAAERGEKQAESEGPSGKEL
QDGAESNGGGAGAESDLKSSNGNPGPRPAAAATLNNNLPEPPGGGGGGGSDGVGAPQPPP
QQQPPPSHPAALPPPAYGFGQPYGRGAAAAFHQHGGQQSPGMAALQSGGLEQNYPGPAGA
PAGPPPPQNSHGAGAEHGFPNHQYNSYYAAGRSAGSYPPPPQAYALSSPRGSAPPAAKSP
AAAAAAFQQQQQRFGVMGPSAAGGAGGGGTTPQPTATPTLNQLLTSPSSARAYQGYPGGD
YSAGPQDGAAAAKGAADMVSQYGGGSGQGWAAAGGAPPRSHHAPMSPGSSGGGGQSLGRS
XQPASPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQAPQRYPMAMQSR
TQSAMGSISYAQQMPPYGQQGPSAYGQQSQSPYYNQQSPHPQQQQQQQPPYSQQPPSQPS
HPQPSYQQQQQQQAQPPAAAQPPYSQPPAQPPHQQPPSPYPQQPPAPQHPQGQPPYSQQQ
SQSPYQQQQAQQQQQQAQPSSSYPPAQPPQQPSAYSQQRFPPPQELSQDSFGSQASSAPS
MASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQ
SPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSILH
PSMNQSSMAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGAQMHAAMGPYQQNSMGSYGP
QGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQMHGQSGVPPYSGLPPGRM
GHAAMGSRPYGPNMANMPPQVGSGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPN
MNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTP
ATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFTEEKAMG
MTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYI
QCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEG
GDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTS
DMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQH
YSYGAPYDRVRTEPGLGPEGSLGSGTPQPSILPAAPESGMYSPSRYPQQQQQQQRHDSYG
NQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGLPAKRHEGELYNVPYSSGQAQP
QQQLPPAQPQQPSQQPPAQPSPQQDLYNQYGSTYPAERRAGQSQFPFQFGRDRVSAAPGS
GAQQNIPPQMMGGPIQPAPEGPQQGALWQGRNELGYGSYPNRQSSGAAPQGPAYHGVTRT
DEILHSDQRVNHEGPWPSHGNRQPPYGPPPPPPPPTRPPQSNYQTPPSMQNHIPQVSSPA
PLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEAT
QPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQL
PGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSPEEGEEDDEPRS
LNCEEGEEDEEEEEAAFSSKDKVPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGR
VQEFDSGLLHWRIGGGDTTEHIQTHFESKTELPLPHKRASCSSALRKRSAAESNPSPREG
EAPAPDGSSEKRITATMDDMLSARPGSLAGEEEEVKASETAKESSKFPFVISPAQSHRNI
KILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILG
KLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLD
LSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNV
DLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSI
GNLLGFLEDSLAATQFQQSQAGLMHMQSPPFEATSVDMMRRAARALLALAKVDENHSEFT
LYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6762 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggtcgcccccgccgccgccagcagcctgggcgccccggctccatccgag
ctgaagaaagcggaggcgcagcagcgggattgtcccccggaggaggcggggggtgaggcg
gcggcggcggagcgcggcgagaagcaggcggagagcgagggcccgtcggggaaggagctg
caggacggggccgagagcaacggagggggcgcaggggccgagtccgacctgaagagctcg
aacgggaacccgggccccaggcccgccgccgccgccaccctgaacaataacctcccggag
ccgcccggtggcggcggcggcggcggcagcgacggggtgggggcgccgcagccgccgccg
cagcagcagccgcccccttcccacccggccgccttgcccccgccagcctacggcttcggg
cagccctacggccggggcgccgccgctgccttccaccaacatggcggacaacaaagccct
ggcatggcagcgctgcagagcgggggcctggagcagaactacccggggccggcgggagcc
cccgcggggccgccccctccgcagaactcgcacggcgccggggccgagcacggcttcccc
aaccaccagtacaactcctactacgcggccgggcgcagcgccggctcctacccgcctccc
ccccaggcctacgccctgagctccccccggggctccgcgccgccggccgccaagtccccc
gcggccgccgccgccgccttccagcagcagcagcagcgcttcggggtcatgggtccctcg
gccgccggcggcgcgggaggagggggcaccaccccgcagcccacggccacccccaccctc
aaccagctcctcacctcccccagctccgcccgcgcctaccaggggtaccccgggggcgac
tatagcgccgggccgcaggacggggcggccgccgccaagggcgccgccgacatggtctcg
cagtacggcgggggcagcggccagggctgggcagcggccggcggggccccgccgaggagc
caccacgcgcccatgagccccgggagcagcggcggcgggggacagagcctcggcaggagc
cngcagccggcgagcccgatggatcagatggggaagatgaggcctcagccctacggaggg
aacaacccctacacgcagcagcaggggccgcaggcggggccgcagcagggccacggctac
cccgggcagccctacgggccacaggccccccagagataccccatggccatgcagagcagg
acgcagagcgccatgggcagcatctcctatgcacagcagatgcctccgtacgggcagcag
ggccccagcgcgtacgggcagcagagccagagcccctactacaaccagcagagccctcac
ccgcagcagcagcagcagcagcagcctccctactcgcagcagcccccgtcgcagccctct
caccctcagccctcataccagcagcagcagcagcagcaggcgcagcccccggccgcggcg
cagccgccctactcgcagccgccggcgcagccgccccatcagcagccccccagcccgtac
ccgcagcagccgccggccccgcagcacccccagggccagcccccctactcgcagcagcag
tcccagtcgccgtaccagcagcagcaggcgcagcagcagcagcagcaggcgcagccctcc
tcgtcgtacccgccggcgcagccgccgcagcagccctcggcctactcgcagcagcgcttc
cccccgcctcaggagttatctcaagactcgtttgggtcccaggcatcctctgctccctca
atggcttccagtaaagggcaagaagacatgaacttgaatcttcagtccagaccttccagc
ctgccggacctgtctggttccatagatgacttgcccatggggaccgaaggagccctgagc
cctggagtaagcacatcagggatttccagcagccaaggagagcagagtaacccagctcag
tctcctttctcgccacatacctctcctcacctgccaggcatcagaggaccctccccctcc
ccagttggatctccagccagcgttgctcagtcccgctccggtcccctgtcccctgctgca
gtcccaggcaatcagatgcccccccggccgcccagtggccagtcggactcaatcctgcac
ccctccatgaaccagtcgagcatggcacaggaccgagggtacatgcagaggaacccccag
atgccccagtacagctccccccagcccggctcagccttatccccccggcagtcctcggga
gcacagatgcacgccgccatggggccctaccagcagaactccatggggagctacggaccc
cagggcggccagtacggacctcaaggaggttaccccaggcagccaaactacaacgccatg
tccaacgccaactaccccagcccgggcatgggcggcagcatgaaccccatgggcgccggc
agccagatgcacgggcagagcggggtgcccccgtacagcgggctgcccccgggcaggatg
ggccacgcggccatgggcagccggccctacggccccaacatggccaacatgcccccccag
gtgggcagcggcatgtgccccccgcccgccggcatgaaccgcaaggcgcaggaggccgcc
gccgccgccatgcacgccgccgccaactccatccagaacaggcctcctggttatcccaac
atgaaccaggggggcatgatgggcactgggcctccctatgggcagggaattaacagcatg
gctggcatgataaacccccagggccccccctaccccatggggggcaacatggccaacaac
tctgcagggatggcagcaagccctgaaatgatgggactcggggatgtcaaattaacacct
gcaactaaaatgaacaacaaggcagatgggacgcccaaagcagaatccaagtcaaagaag
tccagctcctctaccacgaccaacgagaagatcaccaagctgtacgagctgggtggggag
cccgagaggaagctgtgggtggatcgttacctggccttcactgaggagaaggccatgggc
atgaccaacctgccagccgtgggcaggaagcccctggacctgtacaggctctacatctct
gtcaaggagatcgggggattgactcaggtcaacaaaaacaagaagtggcgtgagctggcc
accaacctgaacgtgggcacgtcgagcagtgcagccagctccctgaagaagcagtacatc
cagtgtctgtacgccttcgagtgcaagatcgagcgcggcgaggacccccctccagacatc
tttgcagctgctgactccaagaaatcccagaccaagatccagcctccatctccagcgggt
tcaggctccatgcagggccctcagacacctcagtccaccagcagctccatggcagaagga
ggagacttgaagccaccaactccagcgtcgacgcctcacagtcagatgccccctttgcca
ggcatcaggagtaactcggtgggccttcaggatgcctttgcagacggcagtgatcctacg
ttccagaaacggaactccatgactccaaatccagggtaccagcccagcatgaatacctct
gacatgatgggtcgcatgtcttacgagccaaataaagatccctacagcagtatgaggaaa
gctccaggaagcgaccccttcatgtcctcagggcagggtcccaacagtggcatgggtgac
ccttacaaccgcgccgccggccccggcatgggcaacatggccatgggccagcggcagcac
tactcctacggagccccctacgacagggtcaggacggagccggggctggggcccgagggc
agcctgggcagcggcaccccccagcccagcatcctgcccgccgcgcccgagtcgggcatg
tactcgcccagccgctacccccagcagcagcagcagcagcaaagacatgattcctatggc
aatcaattctccactcaaggcacatcctcgggcagccccttccccagccagcaaaccacc
atgtatcagcagcagcagcagaactacaagcggccgatggacggcagctacggcctcccc
gccaagcggcacgagggcgagctctacaacgttccctacagctcggggcaggcccagccg
cagcagcagctgcccccggcgcagccgcagcagcccagccagcagccgccggcgcagccc
tcgccgcagcaggacctgtacaaccagtacggcagcacgtacccggccgagcgccgcgcc
ggccagagccagttccccttccagttcggcagggacagggtctcggccgcccccggctcc
ggcgcccagcagaacatccccccgcagatgatggggggccccatccagccggcccccgag
ggtccccagcaaggggccctgtggcagggcaggaacgagctgggctacggcagttacccc
aaccggcagagctcgggcgcggcgccccagggccccgcctaccacggggtcactcgaacg
gatgaaatcctgcattcagaccagagggtcaaccacgagggaccatggccttcccacggg
aacaggcaacctccctacggcccccccccccccccccccccccccaccaggcccccccag
tccaactaccagaccccccccagcatgcagaatcacattcctcaggtatccagcccagca
cctctgcccagacctctggagaaccgcacttctcccagtaaatccccgttcctgcactcg
gggatgaagatgcagaaggcagggccgcccgtgcctgcctcgcacatcacaccagcagct
gtgcagcctcccatgatccgacgggacatcaccttcccgccgggctcggtggaggccacg
caacctgtgctgaagcagaggaggcggctgacggcaaaagatatcggaactcctgaagcc
tggagagtgatgatgtctctgaagtcagggctgctggctgaaagtacgtgggccttagat
accataaacatcctgctctatgatgacaacagcataatgaccttcaacctcagccagctg
ccaggcttgctggagctcttggtggaatatttccggcgctgcctgattgagatctttgga
atcctgaaggaatacgaggtaggagacccagggcaaagaacactattagatcctgaaagg
ttctgcaaatcttcagcttcctcccctgaagaaggggaggaggacgatgagccacggagc
ctgaactgtgaggagggagaggaggatgaggaagaggaggaggctgcgttttcgagcaag
gacaaagtacctctagagagcagcgaggagaagctagtgagtaaatttgacaagcttcca
gtgaaggtggtgcagaagaacgaccccttcgtggtggattactcggacaagctgggccgg
gtgcaggagttcgacagcgggctcctgcactggcgcatcggcggcggggacaccaccgag
cacatccagacacacttcgagagcaagactgagctgcccttgcctcacaaacgagcttcc
tgctcctctgccttgaggaaacgctcagcagccgagagcaacccgagccccagggaaggg
gaggctcctgcgcccgacggctcctcggagaagaggataactgccaccatggacgacatg
ctctcggcacgcccgggctccctggcaggggaggaggaagaggtcaaagcttcggaaacg
gcgaaggagagcagcaagtttcccttcgtcatcagtccagctcagagccacagaaatata
aaaatcctggaggatgagccccacagtaaggacgagacaccgctctgcaccctcctggac
tggcaggactctctggccaagcgctgcatctgcgtctccaacatcatcaggagtttatcg
tttgtgccaggcaatgactttgaaatgtccaaacaccctgggctgctgctgattctaggg
aaactgatcctcctacaccacaagcatccagaacgcaaacaggcgcccctgacctacgag
aaagaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgt
ttggagatgctgcgtgaaaacacactggtcacgttggccaacatttctgggcagctggac
ctctccccttacccagaaagcatctgtttgcctatcctggatggactcctccactgggca
gtgtgtccctcagcagaggcccaggatccctttccgacactgggacccaacgctgtcctc
tctcctcagagactggttttggaaacactcagcaaactcagcatccaggacaacaacgtg
gatttgatcctcgccacgccgccgttcagccgcttggagaagctgtacagcaccatggtg
cggttcctcagtgacagaaagaacccggtgtgccgggagatggccgtggtgctgctggcc
aacctggcccagggggacagcctggccgccagagccattgctgtgcagaagggcagcatc
ggcaacctgctgggcttcctggaggacagcctggccgccacgcagttccagcagagccag
gcggggctgatgcacatgcagagcccgcccttcgaggccaccagcgtggacatgatgcgc
cgcgccgcccgcgcgctgctggccctggccaaggtggacgagaaccactcggagttcacc
ttgtacgagtcgcggctcttggacatctccgtgtcgcctttgatgaactctttggtttca
caagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
