Pyruvatibacter mobilis: HG718_05035
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Entry
HG718_05035 CDS
T06559
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmob
Pyruvatibacter mobilis
Pathway
pmob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HG718_05035 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmob03021
]
HG718_05035 (rpoC)
03400 DNA repair and recombination proteins [BR:
pmob03400
]
HG718_05035 (rpoC)
Enzymes [BR:
pmob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HG718_05035 (rpoC)
Transcription machinery [BR:
pmob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HG718_05035 (rpoC)
DNA repair and recombination proteins [BR:
pmob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HG718_05035 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
QJD74825
LinkDB
All DBs
Position
1086010..1090206
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVLSNVFNPSGVAETFDAIKISIAAPEKILSWSYGEVKKPETINYRTFKPERDGLFC
ARIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLLLDMALKDLERVLYFESYIVTEPGLTPLKLHQLLTEDEYIDAQDEYGEDAFT
AGIGAEAIRDMLMALDLEKIAAELRVEIAEATTELKPKKLAKRLKVVEAFMESGNRPEWM
IMTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKR
MLQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVV
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLAATIKQAKKLVEKEKPEVWDILEEVIR
EHPVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNILHPADGTPIIVPSQDIVLGLYYLSLEKENEPGEGMVFADVKEIEHAL
DAGAVTLHAKVKARWITKDEDGNDVSHVLDTTPGRMLIGDLLPRHPNVPYDLVNKLMTKK
AISAMIDVVYRHTGQKETVIFCDRIMGLGFARACRAGISFGKDDMVVPEAKEDLVEKTRT
LANEYEQQYIDGLITQGEKYNKVVDAWAKCTDAVAEEMMGKISSVQIDEETNRTKDINSI
YMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKG
LADTALKTANSGYLTRRLVDVAQDCIIIEPDCGSEEGLTVGAVIDSGEVLASLGSRILGR
TPANDIVHPSTGEVIVPKGEEITEPLVELVEAAGIQQVLIRSVLTCKTRGGVCGKCYGRD
LARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVVDSSFIESNHAGSVTISNP
ELVTDSSGNIIVMGRNSQIIVSDAEGTELATHRLSYGTRLRVKDGDQVERGQRMAEWDPY
TLPIITEREGIVAFEDVIDGVTIREVADEATGISSKVVVDWRASTRSADLKPAIVLKGKN
GQVLKLANGNEARYLLSVDAILSVEDGAEVHAGDVLARIPTEGAKTRDITGGLPRVAELF
EARRPKDNAVIAEADGVVEFGRDYKNKRRIIVRPKDESIEPVEYLIPKGKHLSVREGDFI
EKGEYLLDGNPAPHDILAISGVEELARYLVNEIQEVYRLQGVNINDKHIEVIVRQMLQKV
EVTDAGDTSLLSGEQLDRVEFDEINEKVEAEGGTPAKGNPVLLGITKASLQTRSFISAAS
FQETTRVLTEASVSGKQDHLIGLKENVIVGRLIPAGTGALLNRLKHEAADRDETIMDSRG
VTAPVLEEGEAEAAGEVA
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctcagcaacgttttcaacccctcgggcgtcgccgagacgttcgat
gcgatcaagatctcgatcgctgcgccggagaagattctctcctggtcgtatggtgaggtg
aagaagccggaaaccatcaactaccgtactttcaagccggagcgtgacggcctgttctgc
gcgcgcatctttggtccgaccaaggactatgagtgcctgtgcggcaagtacaagcggatg
aagtacaagggcatcatctgcgaaaagtgcggcgtggaagtgaccctctcgaaggtccgc
cgcgagcgcatgggccacatcgagctggccgcgcctgtcgcccatatctggttcctgaag
tcgcttccgtcccggatcggtcttctgctggacatggcgctgaaggatcttgagcgcgtt
ctttacttcgagagctatatcgtcaccgagccgggcctgacgccgctgaagctgcatcag
ctcctgaccgaagacgaatacatcgatgcgcaggacgagtacggcgaagatgctttcact
gccggcattggtgctgaagcgatccgcgacatgctgatggcgctcgaccttgagaagatc
gccgccgagctgcgcgtcgagattgccgaggcgaccaccgagctgaagccgaagaagctc
gccaagcgcctgaaggttgttgaggccttcatggaatccggcaaccgtccggaatggatg
atcatgacggtcgtgccggtcattccgccggaactgcgcccgctggtgccgcttgatggc
ggccgcttcgcgacgtccgacctcaacgatctttatcgccgcgtcatcaaccgtaacaac
cgcctgaagcggctgatggagctgcgcgcgccggacatcatcatccgcaacgaaaagcgc
atgcttcaggaagcggttgatgccctgttcgacaatggccgccgtggccgtgtcatcacc
ggtgccaacaagcgaccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgc
ttccgtcagaacctgctcggcaagcgcgtcgactattccggtcgttcggtgatcgtggtg
ggcccggagctcaagctgcatcagtgcggcctgccgaagaagatggcgcttgagctgttc
aagccgttcatctattcgcgcctcgaggccaagggtctggctgcgaccatcaagcaggcc
aagaagctggtcgagaaagagaagccggaagtctgggatatcctcgaagaggtgatccgc
gagcatccggtcatgctcaaccgtgcgccgacgcttcaccgtctgggcatccaggccttc
gagccgaccctcatcgaaggtaaggccattcagctgcacccgctcgtctgcgcggcgttc
aacgccgactttgacggtgaccagatggccgtgcacgtgcctctgtcgctcgaagcgcag
ctcgaagcccgtgtgctgatgatgtccaccaacaacatcctgcatccggctgacggtacg
ccgatcatcgtgccgtctcaggatatcgtgcttggtctctactatctctcgctggagaag
gagaacgagccgggcgagggcatggtgtttgccgacgtcaaggaaatcgagcacgcgctc
gatgccggtgctgtcacgctgcacgccaaggtgaaggcccgctggatcaccaaggatgag
gacggcaacgacgtgtcccacgtgctggacacgacgccgggccgcatgctgatcggtgac
ctgctgccgcgtcatccgaacgtgccctatgacctcgtcaacaagctgatgaccaagaag
gccatctccgcgatgatcgacgtggtgtaccgccacaccggtcagaaggagacggtgatc
ttctgtgaccggatcatgggtcttggttttgcccgtgcctgccgcgccggcatctcgttc
ggcaaggacgacatggtggtgcccgaggcgaaggaagatctggtcgagaagacccgtacc
ctcgccaatgagtacgagcagcagtacatcgacggcctgatcacgcagggcgagaagtac
aacaaggtcgttgacgcctgggccaagtgcacggacgccgtggccgaggaaatgatgggc
aagatctcgtcggtgcagatcgacgaagagacgaaccgcaccaaggacatcaactcgatc
tacatgatgtcccattccggtgcccgtggttcgcccgctcagatgaagcagcttgccggc
atgcgtggcctgatggccaagccgtcgggcgaaatcatcgagacgccgatcatctcgaac
ttcaaggaaggcctgaccgtgctcgagtacttcaactcgacccacggtgcacgtaagggc
cttgccgacaccgcgctcaagaccgccaactcgggttacctgacccgtcgtctggtggac
gtggcgcaggactgcatcatcatcgagccggattgcggcagcgaagaggggctgaccgtc
ggcgccgtcatcgacagcggtgaagtgttggcgtcgctcggcagccgtatccttggccgt
accccggccaatgacatcgtgcatccgtcgacgggcgaagtgatcgtgccgaagggcgaa
gagatcaccgagccgctggtggaactggtggaagctgccggtatccagcaggtgctgatc
cggtcggtgctgacctgtaagacgcgcggcggtgtttgcggcaagtgctatggccgtgac
ctggcccgcggtacgcccgtcaacatgggcgaagctgtcggcgtcatcgccgcccagtcg
atcggtgaaccgggcacccagttgaccatgcgtaccttccacattggtggcacggcgcag
gtggttgactcctcgttcatcgagtccaaccatgcgggctctgtgaccatttccaatccg
gaactggtgacggacagctcgggcaacatcattgtgatgggccgcaactcgcagatcatc
gtgtctgacgcggaaggcactgagcttgccacgcaccgtctgtcctatggcacgcgcctg
cgtgtgaaggatggggatcaggtcgagcgcggtcagcgtatggctgaatgggatccctat
accctgccgatcatcaccgagcgtgagggcatcgttgccttcgaggatgtgatcgacggt
gtgaccatccgtgaagtggcggatgaagcaacgggtatctcgtccaaggtggttgtggac
tggcgtgcgtcgacccgctcggcggacctcaagccggccatcgtgctcaagggcaagaac
ggccaggtgctgaagctcgccaatggcaacgaggcccgctacctcctgtcggtggacgcc
attctctccgtcgaagacggggcggaggtccatgccggtgacgtgctggcacgtattcca
acggaaggtgccaagacgcgtgacattaccggtggtctgccgcgcgttgcggaactgttc
gaagcacgccgtccgaaggacaacgccgtcatcgcggaagccgatggcgtggtcgagttc
ggccgtgactacaagaacaagcgccgcatcatcgtgcgcccgaaggatgagagcatcgag
cctgtcgaatatctcatccccaagggcaagcatctgtcggtgcgcgagggcgatttcatc
gagaagggtgaatacctgctcgacggcaacccggcaccgcatgacatccttgccatttcg
ggtgtcgaggagctcgcacgctacctcgtcaacgaaatccaggaggtctatcgcctgcag
ggtgtgaacatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtt
gaggttacggatgctggcgacacgtcgcttctgtcgggcgagcagctcgaccgcgtcgag
ttcgacgagatcaatgagaaggtggaggccgaaggcggcacgccggccaagggcaacccg
gttctgctgggtatcaccaaggcctcgctgcagacgcgttcgttcatctcggcggcctcg
ttccaggagaccacgcgcgtcctgactgaagcttcggtcagcggcaagcaggaccacctg
atcggcctcaaggaaaacgtcatcgtgggccgcctcattccggcgggcacgggtgcgctt
ctcaaccgtctcaagcatgaggcggcggaccgcgacgagactatcatggatagccgtggt
gtcactgccccggtccttgaagagggcgaggcggaggctgctggcgaagttgcttaa
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integrated database retrieval system
