Pyruvatibacter mobilis: HG718_07150
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Entry
HG718_07150 CDS
T06559
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pmob
Pyruvatibacter mobilis
Pathway
pmob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG718_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmob03019
]
HG718_07150
Enzymes [BR:
pmob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HG718_07150
Messenger RNA biogenesis [BR:
pmob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HG718_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Shikimate_DH
DRTGG
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QJD75199
LinkDB
All DBs
Position
1503580..1504971
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AA seq
463 aa
AA seq
DB search
MTDFSSLGLAEPILRAVSAEGYTSPTPIQAKVIPAMMQGTDVLGIAQTGTGKTAAFVLPI
LNTLQQHMRPAQPMACRTLILSPTRELAAQIADNIRVYGKHTRPSVAVVVGGARIPAQIK
ALANGNDIVVATPGRLLDLVKNKAARLDAVETVVLDEADQMFDLGFMPQIKKIMAQLPKK
RQTVLLSATMPKTVRDLAQAFLFKPLEVTVTPNSKPIDRIDQKVLMIPAGSKRDVLVDYL
ARDGVERAVVFTRTKRGADKVCKHLDMFGFAAAAIHGNKSQNQRTRSLNGFRSGKVTVLV
ATDIAARGIDVDGVSHVVNYELPNVAEAYVHRVGRTARAGRSGEALTLCDNTERGLLRDI
ERLIKRKIDVAETPEASGRTVVAPEERASYEVAEEKPRPTSRKPRRRKPQGAGQKQDGSQ
NAGRPARGHKARSGKAQGGAQRDAKPGNGQRRQKRNRRPAAAA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatttttcctcgctcggccttgccgagccgatccttcgtgccgtttcggccgag
ggctatacctcccctacgcccattcaggccaaggtgatccccgccatgatgcagggcacc
gacgtgctgggcatcgcacagacgggcaccggtaagaccgccgccttcgtgctgccgatc
ctcaacaccctgcagcagcacatgcgtccggcgcagcccatggcgtgccggaccctgatc
ctgtcgccgacgcgtgaactggcagcgcagattgccgataacatccgcgtctatggcaag
cacacgcgtccgtccgttgcggtcgttgtgggcggcgcgcgcattcccgcgcagatcaag
gcgctggccaacggcaatgacatcgttgttgccacaccgggccgcctgcttgacctggtg
aagaacaaggccgcccggctggatgctgtcgagaccgtggtgctggacgaagccgaccag
atgtttgatctcggcttcatgccgcagatcaagaagatcatggcgcagctgccgaagaag
cggcagacggtgctgttgtcggccaccatgccgaagacggtgcgcgatctggcccaggct
ttcctgttcaagccgctggaagtgacggtgacgccgaactccaagcccatcgaccggatc
gaccagaaggtgctgatgatcccggccggcagcaagcgggacgtgctggtggactatctc
gcccgtgacggcgtggagcgcgcggtcgtcttcacccggacgaagcgcggcgccgacaag
gtgtgcaagcatctggacatgttcgggtttgctgctgcggccatccacggcaacaagagc
cagaaccagcgcacgcgcagcctcaacggcttccgctccggcaaggtaacggtcctggtg
gcgaccgacattgccgcgcgcggcatcgacgtggacggcgtgtcgcatgtggtgaattac
gagctgccgaatgtagccgaagcctatgtgcaccgggtgggccggacggcgcgcgccggg
cgcagcggcgaggcgctgaccctgtgtgacaacaccgagcgcgggctgctgcgcgacatt
gagcggctgatcaagcgcaagattgatgttgcggagacaccggaagcctcgggccgcacg
gtggtggcgccggaagagcgggcctcctatgaggtggcggaagaaaagccgcgccccaca
tcccgcaagccccgtcgccgcaagccgcaaggcgctggccagaaacaggacggcagccag
aatgcgggccgtccggcgcgtggccacaaggcccgctccggcaaggcgcagggcggcgcg
cagcgtgatgccaagcccggcaacgggcagcggcggcagaagcgcaaccgcaggcccgca
gccgcggcctga
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