Pyruvatibacter mobilis: HG718_07605
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Entry
HG718_07605 CDS
T06559
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmob
Pyruvatibacter mobilis
Pathway
pmob03030
DNA replication
pmob03430
Mismatch repair
pmob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HG718_07605 (dnaE)
03430 Mismatch repair
HG718_07605 (dnaE)
03440 Homologous recombination
HG718_07605 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmob03032
]
HG718_07605 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmob03400
]
HG718_07605 (dnaE)
Enzymes [BR:
pmob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HG718_07605 (dnaE)
DNA replication proteins [BR:
pmob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HG718_07605 (dnaE)
DNA repair and recombination proteins [BR:
pmob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HG718_07605 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QJD76815
LinkDB
All DBs
Position
complement(1598444..1601935)
Genome browser
AA seq
1163 aa
AA seq
DB search
MEAAARQATETEGAHDLEHAGFRNPGFIHLRLHTAYSLLEGAVRIPDLIKRCDQLDMPAV
AVTDTGNLFGALEFSEKVSGAGIQPVIGCTLALDLEVEPNRGGVRPPDPTIALFAQNETG
YLNLMALTSDAYLGTDGTEQPHVSLEALARHADGLIALTGGPNGPVNRLAVSGQKDAARA
LTLQLAEAFPGRLYVELQRHGTREEGIAEPVLLDTAFDNDLPIVATNEVFFFDEDDYEAH
DALLCVADGTYVMQEDRRRLTPEHRFKTAGEMAALFADLPEAIAATVEIARRCAYRPRTI
APILPRFEGLDGVDGEAEELKRQAEDGLRMRLETLGAFAPEEDYWKRLEYELGIIHNMGF
PGYFLIVADFIKWAKDHNIPVGPGRGSGAGSVVAWALTITDLDPLRFGLLFERFLNPERV
SMPDFDVDFCQDRRDEVISYVQEKYGRDRVAQIITFGKLQARAVLRDVGRVLQMPYGQVD
RLCKLVPNNPANPVTLGQAIEGEPKLQEARRSEEVVDRLIGMSLKLEGLYRHASTHAAGV
VIGDRPLHELVPLYRDPRSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVIERAVELLRNR
GVEVDVGALPLDDKLTYDMLSRGDTVGVFQLESSGMRDILRKMKPDRFEDIIALVALYRP
GPMDNIPKYLACKKGDEEPDYLHPSLEPILTETFGIMIYQEQVMQIAQVLSGYSLGDADL
LRRAMGKKIKEEMDKQKVRFVEGAEANNVDGKQAAGIFEQVAKFAGYGFNKSHAAAYALV
AYQTAWLKANHPVEFLAASMNLDMGNTDKLNSFRREAQRLEIEVLPPDVNVSGADFTVID
GRISYALAAVRNVGKSAMRHLEEERNKGGAFRSVADFASRVSPKFVNKRAIENLACAGAF
DRLDKNRARLHGSADRVMAEMSRAEAERESSQSSLFGDGPGAAAPDLRLGDQRDWAPMER
LRHEMEAVGFYLSGHPLDDYRDTLRRARVKTYAEFVDSVQRGGGRVAKLAGTVAYKQERR
AKSGNAFAFVGLSDGTGEFEAVIFSDTLATARDYLEANMSVVVGVEADVDGEDVRLKIST
VQPIDKVASETSNGLRLFVDDASALESIKSCLPPRGRGQLSLILDAEKGRKEVEITLPGT
FDVTPQARGALKAIPGVVHVEDI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagccgcccgacaagccactgagaccgaaggggcgcacgacctggaacatgcc
gggttccgcaatcccggcttcatccatttaaggctgcacaccgcctattcgctgcttgaa
ggcgcggtgcgcatccccgacctcatcaagcgctgcgaccagctcgacatgccggcggtg
gccgtcaccgacacgggcaatctgttcggcgcgctggagttttccgaaaaggtctcgggc
gcgggcatccagccggtgatcggctgtaccctggcgctggacctggaggtggagcccaat
cgcggcggcgtccgcccgccggaccccaccatcgcgctgtttgcccagaacgagaccggc
tacctcaacctgatggcgctgacatcggacgcctatctgggcaccgacggcactgaacag
ccgcatgtgtcgctcgaggcgctggcccgccacgccgacgggctgatcgccctcaccggc
ggccccaacggcccggtcaaccggctggcggtctccggccagaaggacgcggcccgcgcg
ctgacgctgcaactggcggaggccttccccggacggctttatgtcgaattgcagcgccac
ggcacccgcgaggaagggatcgccgagccggtgctgctcgacacggccttcgacaacgac
ctgccgatcgtcgccaccaatgaagtgttcttcttcgacgaggatgattacgaagcccat
gacgcgctgctctgcgtggccgacggcacctatgtcatgcaggaggaccgccgccgcctg
acgccggagcaccgtttcaagaccgcgggtgaaatggcggccctgttcgccgatctgccc
gaggccattgccgcgacggtggagatcgcccgccgctgcgcctaccgcccgcgcaccatc
gcgcccatcctgccgcgcttcgaggggctggatggtgtggacggcgaagcggaggaactg
aagcgccaggccgaggacgggctgcgcatgcggcttgagaccctcggcgccttcgccccg
gaggaggactattggaagcggctcgaatacgagctcggcatcatccacaatatgggcttc
cccggttacttcctcatcgtggccgacttcatcaaatgggcgaaggaccacaacatcccc
gtggggccggggcgtggttcgggcgcgggctcggtggtcgcctgggcgctgaccatcacc
gaccttgatccgctgcgcttcggcctgctgttcgagcggtttcttaaccccgaacgcgtg
tccatgcctgacttcgacgtggacttctgccaggatcggcgcgacgaggtgatctcctat
gtgcaggagaaatatggccgcgaccgcgtcgcccagatcatcaccttcggtaagctgcag
gcccgcgccgtgctgcgcgatgtgggccgcgtgctgcagatgccctatggccaggtggac
cggctgtgcaagctggtgcccaacaaccccgccaatccggtcaccctcggccaagccatc
gagggtgaacccaagctgcaggaagcccgccgctccgaagaggtggtggaccggctgatc
ggcatgtcgctgaaactcgaggggctctaccgccacgcctcgacccatgcggccggcgtg
gtgatcggcgaccggcccctgcacgagctggtgccgctttaccgcgacccgcgctcggac
atgccggtcacccagttcaacatgaaatgggtggagcccgcggggctcgtgaagttcgac
ttcctcggcctcaagaccctgacggtgatcgagcgcgcggtggaactgctgcgcaatcgc
ggcgtcgaggtggatgtcggcgccctgccgctcgatgacaaactcacctacgacatgctg
tcgcgcggtgacacggtgggcgtgttccagctggaaagctccggcatgcgcgacatcctg
cgcaagatgaagccggaccgcttcgaggacatcatcgcccttgtggcgctctaccgcccg
ggcccgatggacaacatccccaagtatctggcgtgtaagaagggcgacgaggagcccgat
tatctgcatccgagcctggagccgatcctgaccgagaccttcggcatcatgatctaccag
gagcaggtgatgcagatcgcccaggtgctgtccggctattcgctcggcgatgctgacctg
ctgcgccgcgccatgggcaagaagatcaaggaggaaatggacaagcagaaggtccgtttc
gtcgagggcgccgaagccaacaatgtggacggcaagcaggccgccggcatcttcgagcag
gtggcgaagttcgcaggctacggcttcaacaagagccacgcggcggcctacgcgctggtc
gcctaccagaccgcctggctcaaggccaatcacccggtcgagttcctggccgcctccatg
aacctcgatatgggcaatacggacaaactcaattccttccgccgcgaggcgcagcggctg
gagatcgaggtgctgccgccggatgtgaatgtctccggcgccgatttcaccgtgatcgac
ggccgcatctcctatgcgctggccgccgtacgcaatgtgggcaagtcggccatgcggcac
ctggaggaggagcgcaataagggcggggccttccggtcggtggcggatttcgcctcccgc
gtctcccccaaattcgtcaacaagcgcgccattgaaaacctcgcctgcgccggggcgttt
gaccggctggacaagaaccgcgcccgcctgcacggctccgccgacagggtgatggccgag
atgagccgggctgaagccgagcgcgaaagctcccagtcgagcctgttcggcgacgggccg
ggggcggcggcacctgacctgcgcctgggcgaccagcgcgactgggcaccgatggagcgc
ctgcgccacgagatggaggcggtgggcttctacctctccggccacccgcttgatgattac
cgcgacaccctgcggcgcgcccgggtgaagacctatgcggaattcgtcgacagcgtgcag
cgcggcggcggccgcgtcgccaagctggcaggcacagtcgcctacaagcaggagcgccgc
gccaagagcggcaacgcctttgcctttgtcggcctgtcggacggcaccggcgaattcgag
gcggtgatcttctccgacacgctggcaacggcgcgggattatctcgaggccaacatgtcc
gtcgtggtcggcgtcgaggctgatgtggacggggaggatgtgcggctgaagatctccacc
gttcagcccatcgacaaggtggcgtcggaaacctcgaacggcttgcggctgttcgtcgat
gacgcctcagcgcttgagagcatcaagagctgcctgccgccccgcggccgcggccagctg
agcctcattctggatgccgaaaagggccgcaaggaagtggagatcaccctgccaggcacc
ttcgacgtgaccccccaggcccgcggcgccctgaaggccatccccggcgtggtgcacgtg
gaggatatctga
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