Pyruvatibacter mobilis: HG718_08135
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Entry
HG718_08135 CDS
T06559
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pmob
Pyruvatibacter mobilis
Brite
KEGG Orthology (KO) [BR:
pmob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmob03016
]
HG718_08135 (rnd)
Enzymes [BR:
pmob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HG718_08135 (rnd)
Transfer RNA biogenesis [BR:
pmob03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HG718_08135 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QJD75376
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All DBs
Position
1727650..1728819
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AA seq
389 aa
AA seq
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MDIITTTEALEAACTGLSTETYVTVDTEFLRDSTYWPILCLIQVAAPKGDALLIDPMAEG
IDLSSFYALMANRSVIKVFHAARQDIEIFWHEAKTLPDPLFDTQVAAMVCGFGDSIGYEN
IVKRVTGAQVDKSSRFTDWSRRPLTDKQLRYAAADVTHLRQVYEHLARRITKSGRAEWVA
EEMAILQDPDTYEVKPEDAWKRLKLRNRTRKAVAVLQEAAAWREQEAQIRNIPRGRILKD
DAIQEIATQAPTTADALGNLRAVPRGFAQSRGAKSLLEAVTRGLNRPSSEVMMPEAPEQL
PQGIGPTVELLKVLLKYKCEAHDVAQKLICNVADLERIAADDNADVSALRGWRREIFGED
ALALKNGQLCLAIENQVIKPVKMPQRAAE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggatattatcacgacgaccgaggccctcgaggccgcctgcaccggcctttcgaccgaa
acctatgtgaccgtggatacggagtttctgcgggactcgacctattggccgatcctgtgc
ctgatccaggttgccgcgccgaagggggatgcgctgctcatcgacccgatggcggagggg
atcgacctttcctccttctacgcgctgatggcgaaccggtcggtcatcaaggtgtttcat
gccgcccgccaggacatcgagatcttctggcatgaggcgaagaccctgcccgacccgctg
ttcgacacgcaggtggcggcgatggtgtgcggcttcggcgattcgatcggctatgagaac
atcgtcaaacgggtgacgggcgcccaggtggacaagtcctcgcgctttaccgactggagc
cggcggccgctgaccgacaagcagctgcgctatgcggcggcggacgtgacccatctgcgg
caggtctatgaacatctggcgcggcggatcaccaagtccggccgggcggaatgggtggcc
gaggaaatggccatcctgcaggacccggacacttatgaagtgaagccggaagacgcctgg
aaacggctgaagctgcgcaaccgcacacgcaaggccgtggcggtgctacaggaggcggct
gcctggcgcgagcaggaagcgcagatccgcaatattccgcgcgggcgcatcctgaaggac
gatgcgatccaggaaatcgccacccaggcgccgacgacggcggacgcgctgggcaatctg
cgcgcggtgccgcggggctttgcccagagccggggggccaagagcctgctggaagcagtg
acgcgcgggctcaaccgtccctcctccgaggtgatgatgccggaagcgccggaacagctg
ccccagggcatcggcccgacggtggaattgctgaaggtgctgctgaaatacaaatgcgaa
gcgcatgacgtggcgcagaagctgatctgcaacgtggccgacctcgaacgcatcgcggcg
gacgacaatgcggatgtgtcagccctgcgcggctggcggcgcgagattttcggcgaggac
gcgctggcgctgaaaaacggccagctatgcctggcgatcgagaaccaggtcatcaaaccg
gtgaagatgccgcagcgggctgccgaatag
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