Pyruvatibacter mobilis: HG718_12275
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Entry
HG718_12275 CDS
T06559
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pmob
Pyruvatibacter mobilis
Brite
KEGG Orthology (KO) [BR:
pmob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmob03016
]
HG718_12275
Enzymes [BR:
pmob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HG718_12275
Transfer RNA biogenesis [BR:
pmob03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HG718_12275
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QJD76116
LinkDB
All DBs
Position
complement(2656500..2657114)
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AA seq
204 aa
AA seq
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MTITLHKGDLPDGLDLGPVVAVDTEAMGLDPNRDDLCVVQLSAGDGDAHVVQLNRTTFDC
PNLKALLADAGTVKLFHFARFDVGMISKYLGVTCAPVYCTKIASRLVRTYTDRHGLKDLA
RELLGVDMSKQQQSSDWGADDLSPAQLEYAASDVLYLHQMKDKLDIMLAREGRADLAQAC
FDFLPTRAALDLAGWPDEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaccctgcacaaaggcgatctccccgacgggcttgatctcggccccgtcgtg
gccgtggataccgaggccatgggccttgatccgaaccgggatgatctgtgcgtggtgcag
ctatcggccggcgacggagacgcccatgtggtgcagctcaaccgcaccactttcgactgc
cccaatctcaaggccctgctggccgatgcaggcacggtgaagctgtttcactttgcccgc
ttcgacgtgggcatgatctcgaaatatcttggtgtcacctgcgcaccggtctattgcacc
aagatcgcctcccgcctggtgcggacctatacggaccggcacggcctcaaggatctggcg
cgggaactgctgggcgttgatatgtccaagcagcagcagagctccgactggggggcggac
gatttgagcccggcccagctcgaatacgcggcgtcggacgttctctacctgcaccagatg
aaggacaagctggacataatgctggcgcgggaaggccgtgccgacctggcccaggcctgt
ttcgatttcctgccgacccgggccgccctcgacctggcaggctggccggacgaggacatc
tttgctcacagttga
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